FFCP PHASE1:Hg19::chr1:186647433..186647479,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186647433..186647479,- | |||
|coexpression_cluster_id=C107 | |coexpression_cluster_id=C107 | ||
|description=CAGE_peak_at_chr1:186647433..186647479,- | |description=CAGE_peak_at_chr1:186647433..186647479,- | ||
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|ontology_enrichment_celltype=CL:0002057!2.05e-25!42;CL:0000860!1.73e-24!45;CL:0000766!9.92e-22!76;CL:0000839!3.86e-17!70;CL:0000557!1.04e-16!71;CL:0002194!1.63e-14!63;CL:0000576!1.63e-14!63;CL:0000040!1.63e-14!63;CL:0000559!1.63e-14!63;CL:0002009!1.02e-13!65;CL:0000763!3.08e-11!112;CL:0000049!3.08e-11!112;CL:0000738!5.37e-08!140 | |ontology_enrichment_celltype=CL:0002057!2.05e-25!42;CL:0000860!1.73e-24!45;CL:0000766!9.92e-22!76;CL:0000839!3.86e-17!70;CL:0000557!1.04e-16!71;CL:0002194!1.63e-14!63;CL:0000576!1.63e-14!63;CL:0000040!1.63e-14!63;CL:0000559!1.63e-14!63;CL:0002009!1.02e-13!65;CL:0000763!3.08e-11!112;CL:0000049!3.08e-11!112;CL:0000738!5.37e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.58e-35;33!CL:0002057;6.58e-35;33!CL:0000473;1.40e-23;39!CL:0000234;1.40e-23;39!CL:0000576;3.54e-17;48!CL:0000766;2.75e-16;69!CL:0002595;1.08e-09;5!CL:0000775;3.81e-08;3!CL:0000763;8.47e-08;100!CL:0002087;2.47e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;6.58e-35;33!CL:0002057;6.58e-35;33!CL:0000473;1.40e-23;39!CL:0000234;1.40e-23;39!CL:0000576;3.54e-17;48!CL:0000766;2.75e-16;69!CL:0002595;1.08e-09;5!CL:0000775;3.81e-08;3!CL:0000763;8.47e-08;100!CL:0002087;2.47e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-36,42;CL:0002057,1.47e-36,42;CL:0000473,1.77e-31,48;CL:0000234,1.77e-31,48;CL:0000766,4.49e-30,72;CL:0002194,2.28e-24,59;CL:0000576,2.28e-24,59;CL:0000040,2.28e-24,59;CL:0000559,2.28e-24,59;CL:0000839,3.94e-24,66;CL:0000557,1.03e-23,67;CL:0002009,1.89e-23,61;CL:0000763,1.68e-18,108;CL:0000049,1.68e-18,108;CL:0000738,1.03e-13,136;CL:0002031,1.82e-11,120;CL:0002032,7.51e-11,161;CL:0000837,7.51e-11,161;CL:0002087,1.13e-10,115;CL:0000037,3.34e-10,168;CL:0002595,1.00e-09,5;CL:0000988,1.91e-09,177;CL:0000775,3.68e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.20e-25;42!UBERON:0005754;5.57e-07;1 | |ontology_enrichment_development_v019=CL:0002057;2.20e-25;42!UBERON:0005754;5.57e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.26e-13!80;UBERON:0001474!2.65e-13!86;UBERON:0004765!1.60e-11!101;UBERON:0001434!1.60e-11!101;UBERON:0002193!1.76e-10!112;UBERON:0002390!4.68e-10!102;UBERON:0003061!4.68e-10!102;UBERON:0002204!8.16e-10!167;UBERON:0002405!5.14e-09!115;UBERON:0003081!1.25e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!2.26e-13!80;UBERON:0001474!2.65e-13!86;UBERON:0004765!1.60e-11!101;UBERON:0001434!1.60e-11!101;UBERON:0002193!1.76e-10!112;UBERON:0002390!4.68e-10!102;UBERON:0003061!4.68e-10!102;UBERON:0002204!8.16e-10!167;UBERON:0002405!5.14e-09!115;UBERON:0003081!1.25e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.08e-09;5!UBERON:0001533;1.08e-09;5!UBERON:0006947;2.58e-08;3!UBERON:0004054;2.58e-08;3!UBERON:0003513;4.75e-07;7!UBERON:0000998;5.57e-07;1!UBERON:0006868;5.57e-07;1!UBERON:0001000;9.66e-07;1!UBERON:0005352;9.66e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0003834;1.08e-09;5!UBERON:0001533;1.08e-09;5!UBERON:0006947;2.58e-08;3!UBERON:0004054;2.58e-08;3!UBERON:0003513;4.75e-07;7!UBERON:0000998;5.57e-07;1!UBERON:0006868;5.57e-07;1!UBERON:0001000;9.66e-07;1!UBERON:0005352;9.66e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-20,76;UBERON:0001474,1.19e-18,82;UBERON:0002390,8.97e-17,98;UBERON:0003061,8.97e-17,98;UBERON:0004765,1.23e-16,90;UBERON:0001434,2.55e-16,100;UBERON:0002405,5.71e-16,93;UBERON:0002193,7.98e-15,108;UBERON:0002204,1.45e-12,167;UBERON:0003081,1.50e-10,203;UBERON:0003834,1.00e-09,5;UBERON:0001533,1.00e-09,5;UBERON:0006947,2.58e-08,3;UBERON:0004054,2.58e-08,3;UBERON:0003513,4.51e-07,7;UBERON:0000926,5.48e-07,315;UBERON:0004120,5.48e-07,315;UBERON:0006603,5.48e-07,315;UBERON:0000998,5.58e-07,1;UBERON:0006868,5.58e-07,1;UBERON:0001000,9.67e-07,1;UBERON:0005352,9.67e-07,1 | |||
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|short_description=p@chr1:186647433..186647479,- | |short_description=p@chr1:186647433..186647479,- | ||
}} | }} |
Latest revision as of 01:33, 28 July 2015
Short description: | p@chr1:186647433..186647479, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186647433..186647479, - |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-36 | 42 |
defensive cell | 1.77e-31 | 48 |
phagocyte | 1.77e-31 | 48 |
myeloid leukocyte | 4.49e-30 | 72 |
monopoietic cell | 2.28e-24 | 59 |
monocyte | 2.28e-24 | 59 |
monoblast | 2.28e-24 | 59 |
promonocyte | 2.28e-24 | 59 |
myeloid lineage restricted progenitor cell | 3.94e-24 | 66 |
granulocyte monocyte progenitor cell | 1.03e-23 | 67 |
macrophage dendritic cell progenitor | 1.89e-23 | 61 |
myeloid cell | 1.68e-18 | 108 |
common myeloid progenitor | 1.68e-18 | 108 |
leukocyte | 1.03e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 1.82e-11 | 120 |
hematopoietic oligopotent progenitor cell | 7.51e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.51e-11 | 161 |
nongranular leukocyte | 1.13e-10 | 115 |
hematopoietic stem cell | 3.34e-10 | 168 |
smooth muscle cell of the subclavian artery | 1.00e-09 | 5 |
hematopoietic cell | 1.91e-09 | 177 |
neutrophil | 3.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.94e-20 | 76 |
bone element | 1.19e-18 | 82 |
hematopoietic system | 8.97e-17 | 98 |
blood island | 8.97e-17 | 98 |
skeletal element | 1.23e-16 | 90 |
skeletal system | 2.55e-16 | 100 |
immune system | 5.71e-16 | 93 |
hemolymphoid system | 7.98e-15 | 108 |
musculoskeletal system | 1.45e-12 | 167 |
lateral plate mesoderm | 1.50e-10 | 203 |
thoracic segment blood vessel | 1.00e-09 | 5 |
subclavian artery | 1.00e-09 | 5 |
male genital duct | 2.58e-08 | 3 |
internal male genitalia | 2.58e-08 | 3 |
trunk blood vessel | 4.51e-07 | 7 |
mesoderm | 5.48e-07 | 315 |
mesoderm-derived structure | 5.48e-07 | 315 |
presumptive mesoderm | 5.48e-07 | 315 |
seminal vesicle | 5.58e-07 | 1 |
seminal fluid secreting gland | 5.58e-07 | 1 |
vas deferens | 9.67e-07 | 1 |
spermatic cord | 9.67e-07 | 1 |