FFCP PHASE1:Hg19::chr1:225888386..225888414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=80bp_to_ENST00000448264,uc001hpe.1_5end | |association_with_transcript=80bp_to_ENST00000448264,uc001hpe.1_5end | ||
|cluster_id=chr1:225888386..225888414,+ | |||
|description=CAGE_peak_1_at_ENST00000448264_5end,CAGE_peak_1_at_uc001hpe.1_5end | |description=CAGE_peak_1_at_ENST00000448264_5end,CAGE_peak_1_at_uc001hpe.1_5end | ||
|id=chr1:225888386..225888414,+ | |id=chr1:225888386..225888414,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.42e-29!180;CL:0000359!9.61e-15!32;CL:0000680!2.03e-14!57;CL:0000056!2.03e-14!57;CL:0000355!2.03e-14!57;CL:0000192!4.19e-14!42;CL:0000514!4.19e-14!42;CL:0000183!5.95e-14!59;CL:0000187!9.63e-13!54;CL:0000057!1.71e-11!75;CL:0000548!8.92e-11!679;CL:0000004!8.92e-11!679;CL:0000255!8.92e-11!679;CL:0000012!2.45e-10!682;CL:0000144!3.68e-10!625;CL:0000393!6.46e-10!60;CL:0000211!6.46e-10!60;CL:0002371!1.14e-09!591;CL:0000220!3.53e-09!246;CL:0002321!7.68e-09!248;CL:0002539!1.49e-07!10;CL:0000062!1.82e-07!11;CL:0000375!1.82e-07!11;CL:0000335!1.82e-07!11;CL:0000222!2.39e-07!119 | |ontology_enrichment_celltype=CL:0000055!9.42e-29!180;CL:0000359!9.61e-15!32;CL:0000680!2.03e-14!57;CL:0000056!2.03e-14!57;CL:0000355!2.03e-14!57;CL:0000192!4.19e-14!42;CL:0000514!4.19e-14!42;CL:0000183!5.95e-14!59;CL:0000187!9.63e-13!54;CL:0000057!1.71e-11!75;CL:0000548!8.92e-11!679;CL:0000004!8.92e-11!679;CL:0000255!8.92e-11!679;CL:0000012!2.45e-10!682;CL:0000144!3.68e-10!625;CL:0000393!6.46e-10!60;CL:0000211!6.46e-10!60;CL:0002371!1.14e-09!591;CL:0000220!3.53e-09!246;CL:0002321!7.68e-09!248;CL:0002539!1.49e-07!10;CL:0000062!1.82e-07!11;CL:0000375!1.82e-07!11;CL:0000335!1.82e-07!11;CL:0000222!2.39e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.89e-16;32!CL:0000192;2.80e-11;43!CL:0002539;2.06e-10;10!CL:0000062;1.52e-09;9!CL:0000153;7.21e-07;9!CL:0000447;7.21e-07;9!CL:0000187;9.18e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;1.89e-16;32!CL:0000192;2.80e-11;43!CL:0002539;2.06e-10;10!CL:0000062;1.52e-09;9!CL:0000153;7.21e-07;9!CL:0000447;7.21e-07;9!CL:0000187;9.18e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.48e-17,32;CL:0000192,1.20e-14,43;CL:0000514,1.20e-14,43;CL:0000680,5.46e-14,58;CL:0000056,5.46e-14,58;CL:0000355,5.46e-14,58;CL:0000187,7.14e-12,55;CL:0002539,2.14e-10,10;CL:0000393,9.01e-10,61;CL:0000211,9.01e-10,61;CL:0000062,2.43e-09,11;CL:0000375,2.43e-09,11;CL:0000335,2.43e-09,11;CL:0000048,1.67e-07,427;CL:0000222,2.11e-07,121;CL:0000723,5.11e-07,433;CL:0002321,5.67e-07,250;CL:0000153,5.84e-07,9;CL:0000447,5.84e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;2.80e-11;43!CL:0000335;2.27e-09;11!CL:0000355;3.16e-07;58 | |ontology_enrichment_development_v019=CL:0000514;2.80e-11;43!CL:0000335;2.27e-09;11!CL:0000355;3.16e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.24e-19!83;UBERON:0002329!4.24e-19!83;UBERON:0003077!4.24e-19!83;UBERON:0003059!4.24e-19!83;UBERON:0007282!4.24e-19!83;UBERON:0009618!4.24e-19!83;UBERON:0007285!4.24e-19!83;UBERON:0000486!1.45e-17!82;UBERON:0001134!1.07e-15!61;UBERON:0002036!1.07e-15!61;UBERON:0003082!1.07e-15!61;UBERON:0002385!4.21e-15!63;UBERON:0001015!4.21e-15!63;UBERON:0000383!4.21e-15!63;UBERON:0004290!5.20e-15!70;UBERON:0005256!5.94e-14!143;UBERON:0000475!3.28e-13!365;UBERON:0003102!1.13e-11!95;UBERON:0002100!1.83e-11!216;UBERON:0001637!6.46e-10!42;UBERON:0003509!6.46e-10!42;UBERON:0004572!6.46e-10!42;UBERON:0003104!1.33e-09!238;UBERON:0009142!1.33e-09!238;UBERON:0004573!2.71e-09!33;UBERON:0004571!2.71e-09!33;UBERON:0000490!3.95e-08!138;UBERON:0000481!5.94e-08!347;UBERON:0002049!1.04e-07!79;UBERON:0007798!1.04e-07!79;UBERON:0001981!1.29e-07!60;UBERON:0007500!1.29e-07!60;UBERON:0004537!1.29e-07!60;UBERON:0006965!1.29e-07!60;UBERON:0004237!1.49e-07!10;UBERON:0004695!1.49e-07!10;UBERON:0002111!1.49e-07!10;UBERON:0004178!1.49e-07!10;UBERON:0002199!5.93e-07!45;UBERON:0002416!5.93e-07!45;UBERON:0004872!7.97e-07!84 | |ontology_enrichment_uberon=UBERON:0000914!4.24e-19!83;UBERON:0002329!4.24e-19!83;UBERON:0003077!4.24e-19!83;UBERON:0003059!4.24e-19!83;UBERON:0007282!4.24e-19!83;UBERON:0009618!4.24e-19!83;UBERON:0007285!4.24e-19!83;UBERON:0000486!1.45e-17!82;UBERON:0001134!1.07e-15!61;UBERON:0002036!1.07e-15!61;UBERON:0003082!1.07e-15!61;UBERON:0002385!4.21e-15!63;UBERON:0001015!4.21e-15!63;UBERON:0000383!4.21e-15!63;UBERON:0004290!5.20e-15!70;UBERON:0005256!5.94e-14!143;UBERON:0000475!3.28e-13!365;UBERON:0003102!1.13e-11!95;UBERON:0002100!1.83e-11!216;UBERON:0001637!6.46e-10!42;UBERON:0003509!6.46e-10!42;UBERON:0004572!6.46e-10!42;UBERON:0003104!1.33e-09!238;UBERON:0009142!1.33e-09!238;UBERON:0004573!2.71e-09!33;UBERON:0004571!2.71e-09!33;UBERON:0000490!3.95e-08!138;UBERON:0000481!5.94e-08!347;UBERON:0002049!1.04e-07!79;UBERON:0007798!1.04e-07!79;UBERON:0001981!1.29e-07!60;UBERON:0007500!1.29e-07!60;UBERON:0004537!1.29e-07!60;UBERON:0006965!1.29e-07!60;UBERON:0004237!1.49e-07!10;UBERON:0004695!1.49e-07!10;UBERON:0002111!1.49e-07!10;UBERON:0004178!1.49e-07!10;UBERON:0002199!5.93e-07!45;UBERON:0002416!5.93e-07!45;UBERON:0004872!7.97e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0004765;2.95e-13;26!UBERON:0004573;3.40e-13;33!UBERON:0004571;3.40e-13;33!UBERON:0002204;4.30e-12;70!UBERON:0001434;3.72e-11;36!UBERON:0001637;1.18e-10;42!UBERON:0003509;1.18e-10;42!UBERON:0004572;1.18e-10;42!UBERON:0004237;2.06e-10;10!UBERON:0004695;2.06e-10;10!UBERON:0002111;2.06e-10;10!UBERON:0004178;2.06e-10;10!UBERON:0002385;1.22e-08;31!UBERON:0001015;1.22e-08;31!UBERON:0000383;1.22e-08;31!UBERON:0000947;1.54e-08;21!UBERON:0010191;1.54e-08;21!UBERON:0004905;2.44e-07;8!UBERON:0000982;2.44e-07;8!UBERON:0004770;2.44e-07;8!UBERON:0000075;9.46e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0004765;2.95e-13;26!UBERON:0004573;3.40e-13;33!UBERON:0004571;3.40e-13;33!UBERON:0002204;4.30e-12;70!UBERON:0001434;3.72e-11;36!UBERON:0001637;1.18e-10;42!UBERON:0003509;1.18e-10;42!UBERON:0004572;1.18e-10;42!UBERON:0004237;2.06e-10;10!UBERON:0004695;2.06e-10;10!UBERON:0002111;2.06e-10;10!UBERON:0004178;2.06e-10;10!UBERON:0002385;1.22e-08;31!UBERON:0001015;1.22e-08;31!UBERON:0000383;1.22e-08;31!UBERON:0000947;1.54e-08;21!UBERON:0010191;1.54e-08;21!UBERON:0004905;2.44e-07;8!UBERON:0000982;2.44e-07;8!UBERON:0004770;2.44e-07;8!UBERON:0000075;9.46e-07;16 | ||
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| ||
|short_description=p1@ENST00000448264,p1@uc001hpe.1 | |short_description=p1@ENST00000448264,p1@uc001hpe.1 | ||
}} | }} |
Latest revision as of 04:29, 28 July 2015
Short description: | p1@ENST00000448264, p1@uc001hpe.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000448264_5end, CAGE_peak_1_at_uc001hpe.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000448264, uc001hpe.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.48e-17 | 32 |
smooth muscle cell | 1.20e-14 | 43 |
smooth muscle myoblast | 1.20e-14 | 43 |
muscle precursor cell | 5.46e-14 | 58 |
myoblast | 5.46e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.46e-14 | 58 |
muscle cell | 7.14e-12 | 55 |
aortic smooth muscle cell | 2.14e-10 | 10 |
electrically responsive cell | 9.01e-10 | 61 |
electrically active cell | 9.01e-10 | 61 |
osteoblast | 2.43e-09 | 11 |
osteoprogenitor cell | 2.43e-09 | 11 |
mesenchyme condensation cell | 2.43e-09 | 11 |
multi fate stem cell | 1.67e-07 | 427 |
mesodermal cell | 2.11e-07 | 121 |
somatic stem cell | 5.11e-07 | 433 |
embryonic cell | 5.67e-07 | 250 |
GAG secreting cell | 5.84e-07 | 9 |
carbohydrate secreting cell | 5.84e-07 | 9 |