FFCP PHASE1:Hg19::chr1:45088343..45088354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:45088343..45088354,+ | |||
|description=CAGE_peak_at_chr1:45088343..45088354,+ | |description=CAGE_peak_at_chr1:45088343..45088354,+ | ||
|id=chr1:45088343..45088354,+ | |id=chr1:45088343..45088354,+ | ||
|ontology_enrichment_celltype=CL:0002551;8.87e-50;6!CL:0002583;5.48e-18;2!CL:0002620;1.15e-13;23 | |ontology_enrichment_celltype=CL:0002551!2.47e-24!6;CL:0002583!8.36e-13!2;CL:0000057!6.27e-12!75;CL:0002620!2.46e-11!23;CL:0002582!2.16e-08!3;CL:0002334!8.25e-08!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0002551;8.87e-50;6!CL:0002583;5.48e-18;2!CL:0002620;1.15e-13;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002551,8.88e-50,6;CL:0002583,5.48e-18,2;CL:0002620,1.15e-13,23;CL:0000057,1.61e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0002067;1.55e-33;9!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0002199;1.19e-08;46!UBERON:0002416;1.19e-08;46!UBERON:0002072;5.35e-08;5!UBERON:0003102;6.44e-08;50 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002067!3.71e-16!9;UBERON:0004016!3.71e-16!9;UBERON:0010083!3.71e-16!9;UBERON:0002199!5.96e-11!45;UBERON:0002416!5.96e-11!45;UBERON:0002097!5.91e-08!40;UBERON:0003102!1.63e-07!95;UBERON:0000941!2.50e-07!1;UBERON:0004904!2.50e-07!1;UBERON:0002464!2.50e-07!1;UBERON:0001021!2.50e-07!1;UBERON:0001785!2.50e-07!1;UBERON:0000992!3.60e-07!13;UBERON:0007029!4.78e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0002067;1.55e-33;9!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0002199;1.19e-08;46!UBERON:0002416;1.19e-08;46!UBERON:0002072;5.35e-08;5!UBERON:0003102;6.44e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0002067,1.55e-33,9;UBERON:0004016,1.55e-33,9;UBERON:0010083,1.55e-33,9;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0002199,4.39e-12,46;UBERON:0002416,4.39e-12,46;UBERON:0001781,1.44e-09,4;UBERON:0004923,1.46e-08,66;UBERON:0002072,5.35e-08,5;UBERON:0002097,5.45e-08,41;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p@chr1:45088343..45088354,+ | |short_description=p@chr1:45088343..45088354,+ | ||
}} | }} |
Latest revision as of 08:35, 28 July 2015
Short description: | p@chr1:45088343..45088354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:45088343..45088354, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 8.88e-50 | 6 |
subcutaneous preadipocyte | 5.48e-18 | 2 |
skin fibroblast | 1.15e-13 | 23 |
fibroblast | 1.61e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
dermis | 1.55e-33 | 9 |
dermatome | 1.55e-33 | 9 |
future dermis | 1.55e-33 | 9 |
neural tissue | 9.07e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
integument | 4.39e-12 | 46 |
integumental system | 4.39e-12 | 46 |
layer of retina | 1.44e-09 | 4 |
organ component layer | 1.46e-08 | 66 |
hypodermis | 5.35e-08 | 5 |
skin of body | 5.45e-08 | 41 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |