FFCP PHASE1:Hg19::chr20:36767877..36767891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:36767877..36767891,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36767877..36767891,- | |description=CAGE_peak_at_chr20:36767877..36767891,- | ||
|id=chr20:36767877..36767891,- | |id=chr20:36767877..36767891,- | ||
|ontology_enrichment_celltype=CL:0000222!1.87e-11!119;CL:0000192!6.72e-09!42;CL:0000514!6.72e-09!42;CL:0000115!2.50e-08!35;CL:0000359!2.55e-08!32;CL:1000497!4.25e-08!18;CL:0002518!4.25e-08!18;CL:0002078!7.99e-08!44;CL:0002139!8.47e-08!24;CL:1000449!2.33e-07!16;CL:0002681!3.05e-07!13;CL:0002584!3.05e-07!13;CL:0000183!5.70e-07!59 | |ontology_enrichment_celltype=CL:0000222!1.87e-11!119;CL:0000192!6.72e-09!42;CL:0000514!6.72e-09!42;CL:0000115!2.50e-08!35;CL:0000359!2.55e-08!32;CL:1000497!4.25e-08!18;CL:0002518!4.25e-08!18;CL:0002078!7.99e-08!44;CL:0002139!8.47e-08!24;CL:1000449!2.33e-07!16;CL:0002681!3.05e-07!13;CL:0002584!3.05e-07!13;CL:0000183!5.70e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.14e-11;19!CL:0000192;4.53e-09;43!CL:0000115;3.08e-08;36!CL:0000359;5.59e-08;32!CL:0002577;5.64e-07;3!CL:1000746;5.95e-07;7!CL:1000612;5.95e-07;7!CL:0002188;6.37e-07;5!CL:0002078;9.21e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.44e-12,121;CL:0000349,7.24e-12,19;CL:0000192,2.68e-10,43;CL:0000514,2.68e-10,43;CL:0000115,2.61e-09,36;CL:0002078,7.20e-09,45;CL:0000359,3.91e-08,32;CL:0002321,6.05e-08,250;CL:0000680,3.50e-07,58;CL:0000056,3.50e-07,58;CL:0000355,3.50e-07,58;CL:1000746,4.63e-07,7;CL:1000612,4.63e-07,7;CL:0000187,5.20e-07,55;CL:0002188,5.54e-07,5;CL:0002577,6.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;4.53e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;1.06e-10;42!UBERON:0003509;1.06e-10;42!UBERON:0004572;1.06e-10;42!UBERON:0000478;4.08e-10;24!UBERON:0004573;5.22e-09;33!UBERON:0004571;5.22e-09;33!UBERON:0003914;1.34e-08;74!UBERON:0001987;3.08e-08;4!UBERON:0005631;3.76e-08;10!UBERON:0000158;3.76e-08;10!UBERON:0007500;1.83e-07;56!UBERON:0001981;1.83e-07;56!UBERON:0004537;1.83e-07;56!UBERON:0002049;4.09e-07;75!UBERON:0007798;4.09e-07;75!UBERON:0003513;4.84e-07;7!UBERON:0000353;5.15e-07;15!UBERON:0000077;5.50e-07;27!UBERON:0000074;5.95e-07;7!UBERON:0001229;5.95e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.52e-19,117;UBERON:0004872,4.15e-17,83;UBERON:0000055,1.17e-15,68;UBERON:0002049,4.51e-15,78;UBERON:0007798,4.51e-15,78;UBERON:0007500,6.20e-15,59;UBERON:0001981,6.20e-15,59;UBERON:0004537,6.20e-15,59;UBERON:0006965,6.20e-15,59;UBERON:0005631,2.08e-14,14;UBERON:0000158,2.08e-14,14;UBERON:0001637,6.60e-14,42;UBERON:0003509,6.60e-14,42;UBERON:0004572,6.60e-14,42;UBERON:0003124,4.88e-13,7;UBERON:0000490,1.50e-12,148;UBERON:0001009,4.95e-12,112;UBERON:0005256,7.22e-12,122;UBERON:0004535,1.28e-11,109;UBERON:0000926,1.23e-10,315;UBERON:0004120,1.23e-10,315;UBERON:0006603,1.23e-10,315;UBERON:0003104,1.64e-10,160;UBERON:0009142,1.64e-10,160;UBERON:0000478,2.32e-10,24;UBERON:0004573,2.93e-10,33;UBERON:0004571,2.93e-10,33;UBERON:0007503,1.23e-09,78;UBERON:0004111,1.08e-08,240;UBERON:0001987,2.25e-08,4;UBERON:0004340,2.25e-08,4;UBERON:0003081,3.19e-08,203;UBERON:0000025,3.53e-08,192;UBERON:0000483,4.29e-08,306;UBERON:0000119,7.18e-08,309;UBERON:0000353,4.33e-07,15;UBERON:0001008,4.47e-07,48;UBERON:0010532,4.63e-07,7;UBERON:0000074,4.63e-07,7;UBERON:0001229,4.63e-07,7;UBERON:0001230,4.63e-07,7;UBERON:0003220,4.63e-07,7;UBERON:0005749,4.63e-07,7;UBERON:0004199,4.63e-07,7;UBERON:0004209,4.63e-07,7;UBERON:0004198,4.63e-07,7;UBERON:0003513,5.19e-07,7;UBERON:0002100,6.67e-07,199;UBERON:0002385,8.25e-07,64;UBERON:0001015,8.25e-07,64;UBERON:0000383,8.25e-07,64 | |||
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| ||
|short_description=p@chr20:36767877..36767891,- | |short_description=p@chr20:36767877..36767891,- | ||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36767877..36767891, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36767877..36767891, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.44e-12 | 121 |
extraembryonic cell | 7.24e-12 | 19 |
smooth muscle cell | 2.68e-10 | 43 |
smooth muscle myoblast | 2.68e-10 | 43 |
endothelial cell | 2.61e-09 | 36 |
meso-epithelial cell | 7.20e-09 | 45 |
vascular associated smooth muscle cell | 3.91e-08 | 32 |
embryonic cell | 6.05e-08 | 250 |
muscle precursor cell | 3.50e-07 | 58 |
myoblast | 3.50e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.50e-07 | 58 |
glomerular cell | 4.63e-07 | 7 |
kidney corpuscule cell | 4.63e-07 | 7 |
muscle cell | 5.20e-07 | 55 |
glomerular endothelial cell | 5.54e-07 | 5 |
placental epithelial cell | 6.28e-07 | 3 |