FFCP PHASE1:Hg19::chr20:52446050..52446068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:52446050..52446068,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr20:52446050..52446068,- | |description=CAGE_peak_at_chr20:52446050..52446068,- | ||
|id=chr20:52446050..52446068,- | |id=chr20:52446050..52446068,- | ||
|ontology_enrichment_celltype=CL:0002057!3.02e-19!42;CL:0000860!4.21e-18!45;CL:0000144!3.86e-17!625;CL:0000012!1.11e-16!682;CL:0000548!1.64e-16!679;CL:0000004!1.64e-16!679;CL:0000255!1.64e-16!679;CL:0002371!1.72e-16!591;CL:0002009!1.48e-12!65;CL:0000048!1.94e-12!430;CL:0000723!5.10e-12!436;CL:0002194!1.27e-11!63;CL:0000576!1.27e-11!63;CL:0000040!1.27e-11!63;CL:0000559!1.27e-11!63;CL:0000034!1.58e-11!444;CL:0000063!3.45e-11!578;CL:0000003!5.24e-11!722;CL:0000557!6.37e-11!71;CL:0000766!4.73e-10!76;CL:0000839!1.11e-09!70;CL:0000134!3.34e-09!358;CL:0002320!3.99e-09!365;CL:0000219!8.82e-09!390 | |ontology_enrichment_celltype=CL:0002057!3.02e-19!42;CL:0000860!4.21e-18!45;CL:0000144!3.86e-17!625;CL:0000012!1.11e-16!682;CL:0000548!1.64e-16!679;CL:0000004!1.64e-16!679;CL:0000255!1.64e-16!679;CL:0002371!1.72e-16!591;CL:0002009!1.48e-12!65;CL:0000048!1.94e-12!430;CL:0000723!5.10e-12!436;CL:0002194!1.27e-11!63;CL:0000576!1.27e-11!63;CL:0000040!1.27e-11!63;CL:0000559!1.27e-11!63;CL:0000034!1.58e-11!444;CL:0000063!3.45e-11!578;CL:0000003!5.24e-11!722;CL:0000557!6.37e-11!71;CL:0000766!4.73e-10!76;CL:0000839!1.11e-09!70;CL:0000134!3.34e-09!358;CL:0002320!3.99e-09!365;CL:0000219!8.82e-09!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-55;33!CL:0002057;9.80e-55;33!CL:0000473;1.13e-39;39!CL:0000234;1.13e-39;39!CL:0000576;8.18e-30;48!CL:0000766;1.78e-18;69!CL:0000569;6.72e-09;4!CL:0000763;4.48e-08;100!CL:0000767;7.39e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.38e-56,42;CL:0002057,9.38e-56,42;CL:0000473,3.65e-50,48;CL:0000234,3.65e-50,48;CL:0002009,4.68e-41,61;CL:0002194,3.35e-40,59;CL:0000576,3.35e-40,59;CL:0000040,3.35e-40,59;CL:0000559,3.35e-40,59;CL:0000766,1.21e-37,72;CL:0000557,2.00e-36,67;CL:0000839,7.72e-35,66;CL:0000763,8.46e-23,108;CL:0000049,8.46e-23,108;CL:0000134,1.05e-16,354;CL:0002320,5.04e-16,361;CL:0000738,8.07e-16,136;CL:0002031,1.02e-15,120;CL:0002087,1.16e-15,115;CL:0000048,3.27e-15,427;CL:0000034,8.08e-15,441;CL:0000723,9.97e-15,433;CL:0000219,2.74e-14,386;CL:0002032,1.02e-11,161;CL:0000837,1.02e-11,161;CL:0000037,8.40e-11,168;CL:0000988,9.65e-10,177;CL:0000569,8.01e-09,4;CL:0000011,8.01e-09,4;CL:0000767,7.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-41;42!CL:0000011;6.72e-09;4!CL:0000049;3.47e-07;108 | |||
|ontology_enrichment_disease=DOID:2394!1.05e-08!14 | |ontology_enrichment_disease=DOID:2394!1.05e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.76e-13;14!DOID:120;1.15e-08;27!DOID:193;6.94e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.93e-13,14;DOID:120,1.58e-08,27;DOID:193,9.21e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.45e-12!167;UBERON:0002371!2.95e-12!80;UBERON:0001474!3.33e-11!86;UBERON:0004765!1.10e-10!101;UBERON:0001434!1.10e-10!101;UBERON:0000926!6.79e-10!448;UBERON:0004120!6.79e-10!448;UBERON:0006603!6.79e-10!448;UBERON:0002384!1.02e-09!375;UBERON:0003081!2.36e-08!216;UBERON:0002405!3.52e-07!115;UBERON:0002390!5.04e-07!102;UBERON:0003061!5.04e-07!102;UBERON:0002193!9.41e-07!112 | |ontology_enrichment_uberon=UBERON:0002204!1.45e-12!167;UBERON:0002371!2.95e-12!80;UBERON:0001474!3.33e-11!86;UBERON:0004765!1.10e-10!101;UBERON:0001434!1.10e-10!101;UBERON:0000926!6.79e-10!448;UBERON:0004120!6.79e-10!448;UBERON:0006603!6.79e-10!448;UBERON:0002384!1.02e-09!375;UBERON:0003081!2.36e-08!216;UBERON:0002405!3.52e-07!115;UBERON:0002390!5.04e-07!102;UBERON:0003061!5.04e-07!102;UBERON:0002193!9.41e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.98e-07;5!UBERON:0000992;3.01e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-38,76;UBERON:0001474,5.27e-35,82;UBERON:0004765,7.53e-31,90;UBERON:0002405,1.78e-29,93;UBERON:0001434,4.19e-28,100;UBERON:0002390,2.24e-27,98;UBERON:0003061,2.24e-27,98;UBERON:0002193,9.08e-24,108;UBERON:0002204,1.61e-18,167;UBERON:0003081,2.33e-17,203;UBERON:0002384,1.73e-16,371;UBERON:0000926,3.92e-15,315;UBERON:0004120,3.92e-15,315;UBERON:0006603,3.92e-15,315;UBERON:0002118,2.73e-07,5;UBERON:0000992,3.24e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0.247532705920093,0.994192127183747,1.34465029290355,0.602694528023977,0.730310090387373,1.46379839637152,0.246242116153576,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0,0,0,7.86728553697808,6.90892916574983,11.1467608787575,3.67768489791571,0.6024118375565,0.369754010166788,0,0,0.587200878669695,21.6058209327432,21.257711431835,19.3139674937108,0,0,0,4.36194716338694,2.64513160582167,5.33684934613196,11.6214518452842,9.45686142450199,21.060033220867,34.8107794709802,34.3255346748995,46.8234815179399,28.2691458204027,27.1103567105207,33.8566216485854,6.77672422353377,5.45812300115692,8.31476892446813,22.9562919278177,21.1813157870222,15.983428144976,9.89553900560148,9.77371922345996,12.3605177654481,11.0279510678862,8.5107783703671,9.34233373493363,27.386104512985,32.3319409420525,49.9534342821768,12.1079900526674,15.0993830754902,18.9877432464531,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,2.24203425192614,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0.132957960518865,1.19245312152671,0,0,0.79504962946682,0.860234595106124,0,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.44905874525234,0,4.5994991239765,0,0,0,0,0,0.496971951695318,0.12663051166458,2.51577443545116,0.860509862246441,0,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0.234321431833797,0.624320153660641,0.570471821544449,0.298897361103602,0.469737994575059,0.161872944368132,0.561803226808994,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0.168336113954066,0.500474079487857,0,1.31693286264251,0.30648779579902,0,0.226864366320042,1.79389635688862,0,0.847727604638247,0.900273288253207,0.515262646192195,0.515281080091258,0,1.0126579934476,0.292311015483596,1.7670364197088,0.276149695926898,0,1.77504796258307,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0.252320850875628,0,1.56449532329816,0.643240938192885,2.76269842704961,1.39310378409594,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.301586917234893,0,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.925971025153221,0.190254152234598,0,0.858486162094873,0,0,0.297262324577456,0,0.503946384596579,0,0.179117045405697,0.871901815541886,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0,1.17217447210047,0,0.205654985406647,0.300343057843917,0,0.672786506072164,0.43596006883328,0.51336800074665,0.258543431515556,0,0,0,0,0.771622122786426,0,0,0.285955987316295,0.542621605391443,0.823240336780769,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0.985153801009636,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.713715955188647,0.630809660135739,0.117141414992713,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0.206768026122887,0.647142602455851,0.533637789017222,0,0,0,0,1.38115775959256,0.280660094433074,0.384417447767103,0,0,0,1.54209693802656,0.532685175939381,0.9033987161519,0.519254429183621,0.581051892299796,0.241718899183244,0,0.184161977871793,0.34444334449382,0.182091168006717,0.262248829918848,1.80479845162965,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0.680374821106063,0.431831832204279,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0,0.412164046590889,0.457847324091717,0.330037999682352,0,0,0,0.193341436584244,0.462145851343933,0.460511024178389,0.551346289938122,0.214840489736547,0.435050081742686,0.426133137080504,0.267096106940212,0.495854746082934,0.192190067365106,0.893288987462089,0,0,0.62962469366128,0,0.308033580176089,0,0,0,1.28812398067792,0,0,0.190630193923825,0.255897791311334,0,0.95460974377781,2.35484592059769,0,0.274537029736055,0.589062011728432,0,0,0.421258456238981,0,0,0,0,0.424216295861138,1.13008116620243,1.10273068709225,0,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0.281695602532241,0.430234056612155,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.577332676353072,0,0,0.188287601553558,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,1.70481688083848,0.23874448473769,0.593929361665277,0,0,0,0.333926115068718,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0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| ||
|short_description=p@chr20:52446050..52446068,- | |short_description=p@chr20:52446050..52446068,- | ||
}} | }} |
Latest revision as of 15:30, 28 July 2015
Short description: | p@chr20:52446050..52446068, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52446050..52446068, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-38 | 76 |
bone element | 5.27e-35 | 82 |
skeletal element | 7.53e-31 | 90 |
immune system | 1.78e-29 | 93 |
skeletal system | 4.19e-28 | 100 |
hematopoietic system | 2.24e-27 | 98 |
blood island | 2.24e-27 | 98 |
hemolymphoid system | 9.08e-24 | 108 |
musculoskeletal system | 1.61e-18 | 167 |
lateral plate mesoderm | 2.33e-17 | 203 |
connective tissue | 1.73e-16 | 371 |
mesoderm | 3.92e-15 | 315 |
mesoderm-derived structure | 3.92e-15 | 315 |
presumptive mesoderm | 3.92e-15 | 315 |
right ovary | 2.73e-07 | 5 |
female gonad | 3.24e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.93e-13 | 14 |
female reproductive organ cancer | 1.58e-08 | 27 |
reproductive organ cancer | 9.21e-08 | 29 |