FFCP PHASE1:Hg19::chr21:36238528..36238531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:36238528..36238531,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr21:36238528..36238531,+ | |description=CAGE_peak_at_chr21:36238528..36238531,+ | ||
|id=chr21:36238528..36238531,+ | |id=chr21:36238528..36238531,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-71!42;CL:0000860!3.03e-66!45;CL:0002194!6.05e-51!63;CL:0000576!6.05e-51!63;CL:0000040!6.05e-51!63;CL:0000559!6.05e-51!63;CL:0000766!2.18e-50!76;CL:0002009!3.78e-49!65;CL:0000839!4.02e-48!70;CL:0000557!2.31e-44!71;CL:0000763!3.76e-40!112;CL:0000049!3.76e-40!112;CL:0000738!1.70e-38!140;CL:0000037!1.87e-36!172;CL:0000566!1.87e-36!172;CL:0002087!7.66e-35!119;CL:0000988!7.04e-34!182;CL:0002032!5.11e-29!165;CL:0000837!5.11e-29!165;CL:0002031!5.69e-29!124;CL:0002393!1.42e-14!9;CL:0002397!1.42e-14!9;CL:0000134!1.07e-13!358;CL:0002320!3.18e-13!365;CL:0000767!1.50e-12!3;CL:0000784!2.10e-12!3;CL:0000842!1.14e-11!3;CL:0000219!1.46e-11!390;CL:0000048!2.66e-10!430;CL:0000723!5.23e-10!436;CL:0000034!1.25e-09!444;CL:0000224!7.45e-09!4;CL:0000063!5.29e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.53e-71!42;CL:0000860!3.03e-66!45;CL:0002194!6.05e-51!63;CL:0000576!6.05e-51!63;CL:0000040!6.05e-51!63;CL:0000559!6.05e-51!63;CL:0000766!2.18e-50!76;CL:0002009!3.78e-49!65;CL:0000839!4.02e-48!70;CL:0000557!2.31e-44!71;CL:0000763!3.76e-40!112;CL:0000049!3.76e-40!112;CL:0000738!1.70e-38!140;CL:0000037!1.87e-36!172;CL:0000566!1.87e-36!172;CL:0002087!7.66e-35!119;CL:0000988!7.04e-34!182;CL:0002032!5.11e-29!165;CL:0000837!5.11e-29!165;CL:0002031!5.69e-29!124;CL:0002393!1.42e-14!9;CL:0002397!1.42e-14!9;CL:0000134!1.07e-13!358;CL:0002320!3.18e-13!365;CL:0000767!1.50e-12!3;CL:0000784!2.10e-12!3;CL:0000842!1.14e-11!3;CL:0000219!1.46e-11!390;CL:0000048!2.66e-10!430;CL:0000723!5.23e-10!436;CL:0000034!1.25e-09!444;CL:0000224!7.45e-09!4;CL:0000063!5.29e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.59e-28;3!CL:0000767;3.58e-28;3!CL:0000860;3.62e-25;33!CL:0002057;3.62e-25;33!CL:0002393;4.09e-25;6!CL:0002397;4.09e-25;6!CL:0000576;7.45e-23;48!CL:0000766;5.79e-17;69!CL:0000473;1.95e-16;39!CL:0000234;1.95e-16;39!CL:0000226;6.16e-13;3!CL:0000842;6.16e-13;3!CL:0000094;6.07e-11;8!CL:0000763;3.84e-08;100!CL:0000451;3.94e-08;10!CL:0000081;4.29e-08;11!CL:0002087;6.33e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.66e-40,42;CL:0002057,8.66e-40,42;CL:0000766,1.84e-37,72;CL:0000473,1.53e-34,48;CL:0000234,1.53e-34,48;CL:0002194,1.93e-31,59;CL:0000576,1.93e-31,59;CL:0000040,1.93e-31,59;CL:0000559,1.93e-31,59;CL:0002009,2.38e-30,61;CL:0000738,5.04e-29,136;CL:0000767,1.71e-28,3;CL:0000784,3.94e-28,3;CL:0000839,6.61e-28,66;CL:0000557,1.84e-27,67;CL:0000763,3.55e-24,108;CL:0000049,3.55e-24,108;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0002087,9.07e-20,115;CL:0002393,7.62e-17,9;CL:0002397,7.62e-17,9;CL:0002032,2.49e-15,161;CL:0000837,2.49e-15,161;CL:0002031,2.33e-14,120;CL:0000226,6.97e-13,3;CL:0000842,6.97e-13,3;CL:0000094,4.63e-11,8;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000081,3.53e-08,11;CL:0000219,3.71e-08,386;CL:0000451,4.40e-08,10;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-32;42!CL:0000049;2.42e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.62e-38!80;UBERON:0001474!2.72e-35!86;UBERON:0002390!3.87e-35!102;UBERON:0003061!3.87e-35!102;UBERON:0002193!3.01e-31!112;UBERON:0004765!6.79e-29!101;UBERON:0001434!6.79e-29!101;UBERON:0002405!2.00e-24!115;UBERON:0002204!2.14e-14!167;UBERON:0003081!4.18e-13!216;UBERON:0002384!1.40e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!1.62e-38!80;UBERON:0001474!2.72e-35!86;UBERON:0002390!3.87e-35!102;UBERON:0003061!3.87e-35!102;UBERON:0002193!3.01e-31!112;UBERON:0004765!6.79e-29!101;UBERON:0001434!6.79e-29!101;UBERON:0002405!2.00e-24!115;UBERON:0002204!2.14e-14!167;UBERON:0003081!4.18e-13!216;UBERON:0002384!1.40e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.71e-24,76;UBERON:0002390,1.25e-23,98;UBERON:0003061,1.25e-23,98;UBERON:0001474,4.62e-22,82;UBERON:0002193,3.26e-21,108;UBERON:0004765,6.59e-20,90;UBERON:0002405,3.41e-19,93;UBERON:0001434,1.08e-17,100;UBERON:0003081,4.94e-10,203;UBERON:0002204,1.23e-09,167;UBERON:0002384,1.10e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,2.68680578668049,2.63187409637329,0,0,0,0,0,0,3.32397245119126,3.40925560699241,3.90619567288533,0.223915474239924,0,0,0,1.51150377475524,1.21292030593908,0.464858073811369,0,0.309706370895104,1.1507695692886,1.2808035326455,0.945928919554341,0,0.645484683583826,0,0.752969358170419,1.36453075028923,1.34834090667051,0,0,0.639337125799041,0,0.997318288108159,0.852449501065388,0.580418477257168,1.13477044938228,0.622822248995575,0,0,1.3031330682307,0.605399502633369,1.10483290796269,0.949387162322653,0.422510572623884,1.27562579979026,0.209658645508376,1.12328631146495,0.901061357049038,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62339686735876,1.14398982156026,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,2.68680578668049,2.63187409637329,0,0,0,0,0,0,3.32397245119126,3.40925560699241,3.90619567288533,0.223915474239924,0,0,0,1.51150377475524,1.21292030593908,0.464858073811369,0,0.309706370895104,1.1507695692886,1.2808035326455,0.945928919554341,0,0.645484683583826,0,0.752969358170419,1.36453075028923,1.34834090667051,0,0,0.639337125799041,0,0.997318288108159,0.852449501065388,0.580418477257168,1.13477044938228,0.622822248995575,0,0,1.3031330682307,0.605399502633369,1.10483290796269,0.949387162322653,0.422510572623884,1.27562579979026,0.209658645508376,1.12328631146495,0.901061357049038,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62339686735876,1.14398982156026,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:36238528..36238531,+ | |short_description=p@chr21:36238528..36238531,+ | ||
}} | }} |
Latest revision as of 17:35, 28 July 2015
Short description: | p@chr21:36238528..36238531, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:36238528..36238531, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.71e-24 | 76 |
hematopoietic system | 1.25e-23 | 98 |
blood island | 1.25e-23 | 98 |
bone element | 4.62e-22 | 82 |
hemolymphoid system | 3.26e-21 | 108 |
skeletal element | 6.59e-20 | 90 |
immune system | 3.41e-19 | 93 |
skeletal system | 1.08e-17 | 100 |
lateral plate mesoderm | 4.94e-10 | 203 |
musculoskeletal system | 1.23e-09 | 167 |
connective tissue | 1.10e-08 | 371 |