FFCP PHASE1:Hg19::chr22:31503460..31503464,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:31503460..31503464,- to FFCP PHASE1:Hg19::chr22:31503460..31503464,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000469262_5end | |||
|cluster_id=chr22:31503460..31503464,- | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_2_at_ENST00000469262_5end | |||
|id=chr22:31503460..31503464,- | |||
|ontology_enrichment_celltype=CL:0000055!6.27e-28!180;CL:0000192!4.79e-21!42;CL:0000514!4.79e-21!42;CL:0000680!8.85e-20!57;CL:0000056!8.85e-20!57;CL:0000355!8.85e-20!57;CL:0000183!2.08e-19!59;CL:0000187!9.39e-19!54;CL:0000393!5.28e-17!60;CL:0000211!5.28e-17!60;CL:0000359!3.29e-16!32;CL:0000222!9.36e-12!119;CL:0000057!1.42e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-24;32!CL:0000192;2.18e-20;43!CL:0000187;2.71e-10;55!CL:0002539;8.30e-09;10!CL:0000393;2.12e-08;61!CL:0000211;2.12e-08;61!CL:0002595;3.00e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.40e-27,43;CL:0000514,2.40e-27,43;CL:0000359,6.05e-27,32;CL:0000680,5.39e-22,58;CL:0000056,5.39e-22,58;CL:0000355,5.39e-22,58;CL:0000187,1.05e-21,55;CL:0000393,7.37e-19,61;CL:0000211,7.37e-19,61;CL:0000222,4.38e-12,121;CL:0002539,8.77e-09,10;CL:0002595,1.41e-08,5;CL:0000048,8.65e-08,427;CL:0000723,1.77e-07,433;CL:0000034,4.46e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-20;43!CL:0000355;2.97e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.59e-22!83;UBERON:0002329!5.59e-22!83;UBERON:0003077!5.59e-22!83;UBERON:0003059!5.59e-22!83;UBERON:0007282!5.59e-22!83;UBERON:0009618!5.59e-22!83;UBERON:0007285!5.59e-22!83;UBERON:0004290!3.73e-19!70;UBERON:0000486!2.11e-17!82;UBERON:0001134!4.54e-17!61;UBERON:0002036!4.54e-17!61;UBERON:0003082!4.54e-17!61;UBERON:0002385!5.77e-17!63;UBERON:0001015!5.77e-17!63;UBERON:0000383!5.77e-17!63;UBERON:0001637!2.54e-13!42;UBERON:0003509!2.54e-13!42;UBERON:0004572!2.54e-13!42;UBERON:0004872!3.71e-13!84;UBERON:0005256!6.92e-13!143;UBERON:0002049!1.90e-12!79;UBERON:0007798!1.90e-12!79;UBERON:0001981!2.42e-12!60;UBERON:0007500!2.42e-12!60;UBERON:0004537!2.42e-12!60;UBERON:0006965!2.42e-12!60;UBERON:0000055!3.17e-12!69;UBERON:0000475!4.85e-11!365;UBERON:0002100!5.35e-10!216;UBERON:0004573!2.50e-09!33;UBERON:0004571!2.50e-09!33;UBERON:0004535!6.85e-09!110;UBERON:0001009!1.36e-08!113;UBERON:0000490!3.17e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.90e-13;33!UBERON:0004571;4.90e-13;33!UBERON:0001637;1.59e-11;42!UBERON:0003509;1.59e-11;42!UBERON:0004572;1.59e-11;42!UBERON:0007500;1.87e-09;56!UBERON:0001981;1.87e-09;56!UBERON:0004537;1.87e-09;56!UBERON:0004237;8.30e-09;10!UBERON:0004695;8.30e-09;10!UBERON:0002111;8.30e-09;10!UBERON:0004178;8.30e-09;10!UBERON:0003513;1.25e-08;7!UBERON:0003834;3.00e-08;5!UBERON:0001533;3.00e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.33e-20,62;UBERON:0002036,4.33e-20,62;UBERON:0003082,4.33e-20,62;UBERON:0002329,8.02e-20,71;UBERON:0003059,8.02e-20,71;UBERON:0007282,8.02e-20,71;UBERON:0004290,8.02e-20,71;UBERON:0009618,8.02e-20,71;UBERON:0003077,1.95e-19,72;UBERON:0007285,1.95e-19,72;UBERON:0002385,3.14e-19,64;UBERON:0001015,3.14e-19,64;UBERON:0000383,3.14e-19,64;UBERON:0001637,3.96e-19,42;UBERON:0003509,3.96e-19,42;UBERON:0004572,3.96e-19,42;UBERON:0007524,4.64e-19,73;UBERON:0007503,2.50e-17,78;UBERON:0000486,4.06e-17,83;UBERON:0007500,2.12e-16,59;UBERON:0001981,2.12e-16,59;UBERON:0004537,2.12e-16,59;UBERON:0006965,2.12e-16,59;UBERON:0000055,3.05e-16,68;UBERON:0004573,7.72e-16,33;UBERON:0004571,7.72e-16,33;UBERON:0004872,1.56e-14,83;UBERON:0002049,2.84e-13,78;UBERON:0007798,2.84e-13,78;UBERON:0005256,6.44e-13,122;UBERON:0000490,1.47e-12,148;UBERON:0003104,1.09e-11,160;UBERON:0009142,1.09e-11,160;UBERON:0004535,2.89e-10,109;UBERON:0003914,7.12e-10,117;UBERON:0001009,8.45e-10,112;UBERON:0003513,5.89e-09,7;UBERON:0004237,8.77e-09,10;UBERON:0004695,8.77e-09,10;UBERON:0002111,8.77e-09,10;UBERON:0004178,8.77e-09,10;UBERON:0003834,1.41e-08,5;UBERON:0001533,1.41e-08,5;UBERON:0002100,1.35e-07,199 | |||
|phase1_expression=0.908391896352783,1.2846031433459,1.26858963686374,1.0007329835313,0.893922188854576,5.23403114460221,0,0.631719873426831,0,0,0,0.436882744260345,0,0.495065411840187,0.662794751455832,0,1.20538905604795,2.92124036154949,0.487932798790507,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,1.34140171940727,0.383587685530591,1.0843174571537,1.00267582127178,0.434539556882471,2.3858578411533,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0.258416759169329,0,0,1.20848795132744,1.52054421143703,0.732186172644509,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,0,0.354668382198357,0.560677600142307,2.1349799145941,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.936480230490962,0.570471821544449,1.19558944441441,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.368502951935304,0.413303124703062,0,0.494533858557114,0,3.59309070908119,0.168336113954066,0.125118519871964,0,0.877955241761676,0.30648779579902,0.300476117813194,0.113432183160021,0.179389635688862,1.06778694409284,1.05965950579781,0.600182192168805,0.412210116953756,1.03056216018252,1.11670113798954,0.168776332241266,1.26668106709558,0.252433774244115,0.644349290496095,0.323292113637624,0,0.705264687593482,0.67824236924195,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0.643240938192885,4.14404764057442,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0.98775256867763,0,0,0,0.325808305310325,0,0,0,0.469634776943287,1.01056513432752,0.462985512576611,0.380508304469197,0,0,0,0,0,4.68669169933885,1.00789276919316,0.283550194484773,0.179117045405697,0,0,0.492663237895943,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0,0,1.68053230485111,7.15312891703765,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0,0.142977993658148,1.62786481617433,0.823240336780769,0.325736184293735,0,0.791951872933429,1.80863626235752,3.48613383440118,0.299918973546171,0,0,0,1.4377491329495,1.14861935834114,0,1.15825045334063,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,1.45579603071565,0.713715955188647,0.946214490203608,0.819989904948992,0,2.27407504055985,1.03473071292505,1.32845119707087,0.737476674166813,0.347534457872331,0.783204629850962,1.02943027143257,0,0,0,0,1.66435439510497,0.604780586659361,2.23297027036899,0.61384789315225,0.841980283299221,1.53766979106841,0,0.64341568457443,2.96836132889982,0,1.06537035187876,0.492762936082855,0,0.348631135379878,0,0,0,0.229628896329213,0.910455840033585,1.83574180943194,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0.308097234229289,0,0,0.322260734604821,0.290033387828457,0.340906509664404,0.356128142586949,0.165284915360978,0,0,0.30347334256665,2.32422774648643,0.31481234683064,2.0911118104818,0,2.66153015158511,3.47973196830029,1.29726953372744,1.71749864090389,0.744316738719335,0,0.762520775695299,0.511795582622668,0.855877976067841,1.59101623962968,1.56989728039846,0.539617372749944,0.823611089208164,0.942499218765491,3.23491970517306,9.5106192703805,0.421258456238981,1.95053495635836,0.974853958525138,2.11300293513511,0.272999822815972,1.55545975149084,2.26016233240486,1.65409603063837,5.30751180192976,1.75380354101505,1.15755106853338,0.655894752046633,2.43492452355245,1.54911749049875,0.845086807596724,0.286822704408103,0.589494246078727,3.5667105148125,1.06428319221179,0.844430541190656,0,0,0.699869440489966,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.796991953004279,0.276283915531148,0,0.102268682502155,0,4.0435146396035,0,0,0,0.493217028184668,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0.179515288819544,0,0.957003479195758,0.274792780205587,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0.277349346026277,0,0.195984794828755,0,0,0,0,0,0,0.5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| ||
|short_description=p2@ENST00000469262 | |||
}} | }} |
Latest revision as of 20:15, 28 July 2015
Short description: | p2@ENST00000469262 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000469262_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | -8bp_to_ENST00000469262_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.40e-27 | 43 |
smooth muscle myoblast | 2.40e-27 | 43 |
vascular associated smooth muscle cell | 6.05e-27 | 32 |
muscle precursor cell | 5.39e-22 | 58 |
myoblast | 5.39e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.39e-22 | 58 |
muscle cell | 1.05e-21 | 55 |
electrically responsive cell | 7.37e-19 | 61 |
electrically active cell | 7.37e-19 | 61 |
mesodermal cell | 4.38e-12 | 121 |
aortic smooth muscle cell | 8.77e-09 | 10 |
smooth muscle cell of the subclavian artery | 1.41e-08 | 5 |
multi fate stem cell | 8.65e-08 | 427 |
somatic stem cell | 1.77e-07 | 433 |
stem cell | 4.46e-07 | 441 |