FFCP PHASE1:Hg19::chr2:208029288..208029307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:208029288..208029307,+ | |||
|coexpression_cluster_id=C446 | |coexpression_cluster_id=C446 | ||
|description=CAGE_peak_at_chr2:208029288..208029307,+ | |description=CAGE_peak_at_chr2:208029288..208029307,+ | ||
|id=chr2:208029288..208029307,+ | |id=chr2:208029288..208029307,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.73e-32!42;CL:0000766!7.40e-31!76;CL:0000860!9.29e-29!45;CL:0000557!2.41e-27!71;CL:0000839!3.91e-25!70;CL:0002009!5.08e-24!65;CL:0002194!1.49e-22!63;CL:0000576!1.49e-22!63;CL:0000040!1.49e-22!63;CL:0000559!1.49e-22!63;CL:0000738!3.70e-17!140;CL:0000763!1.85e-16!112;CL:0000049!1.85e-16!112;CL:0002031!6.94e-13!124;CL:0002087!4.57e-11!119;CL:0000988!1.55e-10!182;CL:0000037!7.77e-10!172;CL:0000566!7.77e-10!172;CL:0000115!1.18e-09!35;CL:0002032!4.59e-09!165;CL:0000837!4.59e-09!165;CL:0002393!1.58e-08!9;CL:0002397!1.58e-08!9;CL:0002139!9.39e-08!24 | |ontology_enrichment_celltype=CL:0002057!2.73e-32!42;CL:0000766!7.40e-31!76;CL:0000860!9.29e-29!45;CL:0000557!2.41e-27!71;CL:0000839!3.91e-25!70;CL:0002009!5.08e-24!65;CL:0002194!1.49e-22!63;CL:0000576!1.49e-22!63;CL:0000040!1.49e-22!63;CL:0000559!1.49e-22!63;CL:0000738!3.70e-17!140;CL:0000763!1.85e-16!112;CL:0000049!1.85e-16!112;CL:0002031!6.94e-13!124;CL:0002087!4.57e-11!119;CL:0000988!1.55e-10!182;CL:0000037!7.77e-10!172;CL:0000566!7.77e-10!172;CL:0000115!1.18e-09!35;CL:0002032!4.59e-09!165;CL:0000837!4.59e-09!165;CL:0002393!1.58e-08!9;CL:0002397!1.58e-08!9;CL:0002139!9.39e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-38;33!CL:0002057;1.59e-38;33!CL:0000576;6.03e-38;48!CL:0000766;2.49e-35;69!CL:0000473;3.87e-28;39!CL:0000234;3.87e-28;39!CL:0002393;1.27e-16;6!CL:0002397;1.27e-16;6!CL:0000097;1.17e-14;5!CL:0000763;2.24e-14;100!CL:0002087;5.84e-12;104!CL:0000738;7.48e-11;136!CL:0000081;1.44e-08;11!CL:0000094;1.61e-08;8!CL:0000163;6.28e-08;9!CL:0002619;7.84e-08;3!CL:0000771;3.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.03e-67,72;CL:0000557,8.54e-63,67;CL:0000860,1.16e-57,42;CL:0002057,1.16e-57,42;CL:0000839,1.73e-57,66;CL:0000473,1.20e-52,48;CL:0000234,1.20e-52,48;CL:0002009,1.82e-52,61;CL:0002194,2.28e-48,59;CL:0000576,2.28e-48,59;CL:0000040,2.28e-48,59;CL:0000559,2.28e-48,59;CL:0000763,2.80e-45,108;CL:0000049,2.80e-45,108;CL:0000738,1.22e-40,136;CL:0002031,2.06e-33,120;CL:0000988,5.68e-31,177;CL:0000037,2.40e-30,168;CL:0002032,5.12e-29,161;CL:0000837,5.12e-29,161;CL:0002087,2.96e-26,115;CL:0002393,2.38e-18,9;CL:0002397,2.38e-18,9;CL:0000097,8.71e-15,5;CL:0002028,8.71e-15,5;CL:0000134,4.34e-12,354;CL:0002320,1.39e-11,361;CL:0000048,7.13e-10,427;CL:0000219,8.28e-10,386;CL:0000034,1.14e-09,441;CL:0000723,1.56e-09,433;CL:0000081,1.38e-08,11;CL:0000094,1.46e-08,8;CL:0000163,5.37e-08,9;CL:0002619,6.13e-08,3;CL:0000115,1.81e-07,36;CL:0000771,3.26e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-41;42!CL:0000049;1.48e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.15e-35!112;UBERON:0002390!9.40e-31!102;UBERON:0003061!9.40e-31!102;UBERON:0002405!1.39e-23!115;UBERON:0002371!2.16e-23!80;UBERON:0001474!2.40e-23!86;UBERON:0003081!2.12e-22!216;UBERON:0004765!1.03e-17!101;UBERON:0001434!1.03e-17!101;UBERON:0002204!5.50e-10!167;UBERON:0000178!1.05e-08!15;UBERON:0000179!1.05e-08!15;UBERON:0000463!1.05e-08!15;UBERON:0004535!7.26e-08!110;UBERON:0000480!7.67e-08!626;UBERON:0001009!1.08e-07!113;UBERON:0000467!1.32e-07!625;UBERON:0000926!6.56e-07!448;UBERON:0004120!6.56e-07!448;UBERON:0006603!6.56e-07!448 | |ontology_enrichment_uberon=UBERON:0002193!4.15e-35!112;UBERON:0002390!9.40e-31!102;UBERON:0003061!9.40e-31!102;UBERON:0002405!1.39e-23!115;UBERON:0002371!2.16e-23!80;UBERON:0001474!2.40e-23!86;UBERON:0003081!2.12e-22!216;UBERON:0004765!1.03e-17!101;UBERON:0001434!1.03e-17!101;UBERON:0002204!5.50e-10!167;UBERON:0000178!1.05e-08!15;UBERON:0000179!1.05e-08!15;UBERON:0000463!1.05e-08!15;UBERON:0004535!7.26e-08!110;UBERON:0000480!7.67e-08!626;UBERON:0001009!1.08e-07!113;UBERON:0000467!1.32e-07!625;UBERON:0000926!6.56e-07!448;UBERON:0004120!6.56e-07!448;UBERON:0006603!6.56e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.89e-54,76;UBERON:0002193,9.86e-54,108;UBERON:0002390,4.94e-51,98;UBERON:0003061,4.94e-51,98;UBERON:0002405,5.89e-51,93;UBERON:0001474,2.94e-49,82;UBERON:0004765,7.20e-44,90;UBERON:0001434,2.43e-38,100;UBERON:0003081,4.96e-24,203;UBERON:0002204,2.06e-18,167;UBERON:0000926,6.47e-13,315;UBERON:0004120,6.47e-13,315;UBERON:0006603,6.47e-13,315;UBERON:0002384,6.81e-11,371 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.738726348460727,0,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0.152826811495903,0,0,2.75354993794233,0.767658796194425,0.464448369948228,0.919421224478927,0,0,0,0,0,6.09394949385065,6.81851121398482,3.90619567288533,1.11957737119962,1.94336199611388,1.54545340580512,0.872389432677388,0.377875943688809,0.485168122375632,2.55671940596253,2.46700732813095,2.16794459626573,2.01384674625505,1.5369642391746,3.54723344832878,2.75796544589295,7.74581620300591,9.47985406160392,1.12945403725563,1.09162460023138,0.674170453335254,5.81559395504715,4.17207735198922,10.8687311385837,0.659702600373432,0.797854630486527,1.70489900213078,2.32167390902867,3.97169657283798,4.9825779919646,1.7587406567972,0.521482918420201,2.17188844705117,2.42159801053347,2.20966581592539,5.69632297393592,1.90129757680748,5.95292039902122,3.77385561915077,1.12328631146495,0.450530678524519,0.48217676009124,0.570025487482497,1.19350006319454,1.27864907635244,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,1.12101712596307,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.579606171470105,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0,0,0,0.795285947051099,0,0,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.79504962946682,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0.626984899610432,1.03366703667732,0.35576626268671,1.00416183829401,1.20848795132744,2.28081631715554,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0.450445921933289,0,3.79706263827252,0.183201743930407,61.9367961949497,31.022421131866,0,0,0.379891534993739,0.264818361626438,0,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,1.01056513432752,1.38895653772983,0.951270761172991,0,0,0.492434012174795,0,0.297262324577456,0.93733833986777,0,0,0,0,0,13.3019074231905,1.76096868026452,15.5496086655579,44.2448256990072,12.2455160423589,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0.179060963239896,0,1.57624608161542,0.646882724578552,0.256686072559497,0.254094624222463,0,0.773288812777695,0,0,2.24702107184155,0,1.24324654030811,0,0.500170521059677,0,0,0.178428988797162,0,0,0,2.27407504055985,0,0,0.368738337083406,0,0,0,0.620304078368662,5.82428342210265,4.69601254335155,0.303127571446259,0,0,0,0,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0.164254312027618,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,3.4120015221269,0.850468526382578,0,6.16909010761157,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,2.29391162142713,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0.173624994933292,0,0,0,0.331737779793674,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,3.26173241548684,0.617819694732514,1.14864144456001,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,2.41981432097328,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.399358000997982,0,0,0.53746777989381,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,2.0247650239635,3.095207818231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| ||
|short_description=p@chr2:208029288..208029307,+ | |short_description=p@chr2:208029288..208029307,+ | ||
}} | }} |
Latest revision as of 05:26, 29 July 2015
Short description: | p@chr2:208029288..208029307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:208029288..208029307, + |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.89e-54 | 76 |
hemolymphoid system | 9.86e-54 | 108 |
hematopoietic system | 4.94e-51 | 98 |
blood island | 4.94e-51 | 98 |
immune system | 5.89e-51 | 93 |
bone element | 2.94e-49 | 82 |
skeletal element | 7.20e-44 | 90 |
skeletal system | 2.43e-38 | 100 |
lateral plate mesoderm | 4.96e-24 | 203 |
musculoskeletal system | 2.06e-18 | 167 |
mesoderm | 6.47e-13 | 315 |
mesoderm-derived structure | 6.47e-13 | 315 |
presumptive mesoderm | 6.47e-13 | 315 |
connective tissue | 6.81e-11 | 371 |