FFCP PHASE1:Hg19::chr2:216003447..216003472,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216003447..216003472,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr2:216003447..216003472,+ | |description=CAGE_peak_at_chr2:216003447..216003472,+ | ||
|id=chr2:216003447..216003472,+ | |id=chr2:216003447..216003472,+ | ||
|ontology_enrichment_celltype=CL:0001014!4.89e-41!2;CL:0001016!4.89e-41!2;CL:0000453!4.28e-17!5;CL:0000840!2.04e-14!5;CL:0001029!2.04e-14!5;CL:0000990!6.20e-10!8;CL:0000451!2.72e-08!10;CL:0002681!4.81e-07!13;CL:0002584!4.81e-07!13 | |ontology_enrichment_celltype=CL:0001014!4.89e-41!2;CL:0001016!4.89e-41!2;CL:0000453!4.28e-17!5;CL:0000840!2.04e-14!5;CL:0001029!2.04e-14!5;CL:0000990!6.20e-10!8;CL:0000451!2.72e-08!10;CL:0002681!4.81e-07!13;CL:0002584!4.81e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0001014;6.43e-131;2!CL:0001016;6.43e-131;2!CL:0000453;2.51e-53;5!CL:0000840;1.09e-44;5!CL:0000990;2.87e-30;8!CL:0000451;5.16e-25;10!CL:0002188;1.71e-14;5!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.99e-131,2;CL:0001016,8.99e-131,2;CL:0000453,2.87e-53,5;CL:0000840,1.22e-44,5;CL:0001029,1.22e-44,5;CL:0000990,3.09e-30,8;CL:0000451,5.49e-25,10;CL:0002188,1.60e-14,5;CL:1000746,8.99e-11,7;CL:1000612,8.99e-11,7;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!7.00e-21!4;DOID:1612!7.00e-21!4;DOID:299!8.41e-08!25 | |ontology_enrichment_disease=DOID:5093!7.00e-21!4;DOID:1612!7.00e-21!4;DOID:299!8.41e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!6.04e-09!10;UBERON:0001443!3.25e-08!11;UBERON:0001225!4.81e-07!13;UBERON:0008987!4.81e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,8.99e-11,7;UBERON:0000074,8.99e-11,7;UBERON:0001229,8.99e-11,7;UBERON:0001230,8.99e-11,7;UBERON:0003220,8.99e-11,7;UBERON:0005749,8.99e-11,7;UBERON:0004199,8.99e-11,7;UBERON:0004209,8.99e-11,7;UBERON:0004198,8.99e-11,7;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0004876,2.47e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p@chr2:216003447..216003472,+ | |short_description=p@chr2:216003447..216003472,+ | ||
}} | }} |
Latest revision as of 05:58, 29 July 2015
Short description: | p@chr2:216003447..216003472, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216003447..216003472, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.99e-131 | 2 |
immature CD1a-positive Langerhans cell | 8.99e-131 | 2 |
Langerhans cell | 2.87e-53 | 5 |
immature conventional dendritic cell | 1.22e-44 | 5 |
common dendritic progenitor | 1.22e-44 | 5 |
conventional dendritic cell | 3.09e-30 | 8 |
dendritic cell | 5.49e-25 | 10 |
glomerular endothelial cell | 1.60e-14 | 5 |
glomerular cell | 8.99e-11 | 7 |
kidney corpuscule cell | 8.99e-11 | 7 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 8.99e-11 | 7 |
renal glomerulus | 8.99e-11 | 7 |
renal corpuscle | 8.99e-11 | 7 |
glomerular capsule | 8.99e-11 | 7 |
metanephric mesenchyme | 8.99e-11 | 7 |
glomerular tuft | 8.99e-11 | 7 |
S-shaped body | 8.99e-11 | 7 |
renal vesicle | 8.99e-11 | 7 |
comma-shaped body | 8.99e-11 | 7 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
urogenital ridge | 2.47e-07 | 11 |
cortex of kidney | 7.92e-07 | 12 |
renal parenchyma | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |