FFCP PHASE1:Hg19::chr2:221064298..221064302,+: Difference between revisions
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|id=chr2:221064298..221064302,+
|short_description=p@chr2:221064298..221064302,+
|description=CAGE_peak_at_chr2:221064298..221064302,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:221064298..221064302,+ | |||
|description=CAGE_peak_at_chr2:221064298..221064302,+ | |||
|id=chr2:221064298..221064302,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.05e-29;1!UBERON:0003056;9.43e-11;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.90e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.05e-29;1!DOID:1357;2.05e-29;1!DOID:5409;1.70e-08;4!DOID:0050615;4.19e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.20e-29,1;DOID:1357,4.20e-29,1;DOID:5409,1.70e-08,4;DOID:0050615,4.58e-08,16 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;2.05e-29;1!UBERON:0007195;2.05e-29;1!UBERON:0001764;2.05e-29;1!UBERON:0001785;2.05e-29;1!UBERON:0002464;2.05e-29;1!UBERON:0004904;2.05e-29;1!UBERON:0001825;2.05e-29;1!UBERON:0001021;2.05e-29;1!UBERON:0003714;1.91e-15;2!UBERON:0002702;1.91e-15;2!UBERON:0005162;1.91e-15;2!UBERON:0000122;1.91e-15;2!UBERON:0001950;7.89e-13;20!UBERON:0002619;8.88e-12;22!UBERON:0001870;9.43e-11;3!UBERON:0000956;1.68e-10;25!UBERON:0000203;1.68e-10;25!UBERON:0002791;9.63e-09;32!UBERON:0001869;9.63e-09;32!UBERON:0001893;2.72e-08;34!UBERON:0001872;5.86e-07;5!UBERON:0002021;5.86e-07;5 | |||
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| ||
|short_description=p@chr2:221064298..221064302,+ | |||
}} | }} |
Latest revision as of 07:02, 29 July 2015
Short description: | p@chr2:221064298..221064302, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:221064298..221064302, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.99e-30 | 1 |
cranial nerve | 9.99e-30 | 1 |
nerve trunk | 9.99e-30 | 1 |
nerve connecting eye with brain | 9.99e-30 | 1 |
nerve | 9.99e-30 | 1 |
retinal neural layer | 9.99e-30 | 1 |
presumptive neural retina | 9.99e-30 | 1 |
stroma of bone marrow | 3.16e-29 | 1 |
maxillary sinus | 4.20e-29 | 1 |
paranasal sinus | 4.20e-29 | 1 |
neural tissue | 1.33e-15 | 2 |
multi cell component structure | 1.33e-15 | 2 |
neuron projection bundle | 1.33e-15 | 2 |
middle frontal gyrus | 1.78e-15 | 2 |
neocortex | 7.43e-13 | 20 |
regional part of cerebral cortex | 8.40e-12 | 22 |
frontal cortex | 8.99e-11 | 3 |
cerebral cortex | 1.60e-10 | 25 |
pallium | 1.60e-10 | 25 |
layer of retina | 1.82e-08 | 4 |
regional part of telencephalon | 1.96e-08 | 32 |
cerebral hemisphere | 1.96e-08 | 32 |
brain grey matter | 5.46e-08 | 34 |
gray matter | 5.46e-08 | 34 |
telencephalon | 5.46e-08 | 34 |
pre-chordal neural plate | 8.30e-08 | 61 |
occipital lobe | 5.38e-07 | 5 |
parietal lobe | 6.04e-07 | 5 |
regional part of forebrain | 9.24e-07 | 41 |
forebrain | 9.24e-07 | 41 |
anterior neural tube | 9.24e-07 | 41 |
future forebrain | 9.24e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.20e-29 | 1 |
maxillary sinus cancer | 4.20e-29 | 1 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 4.58e-08 | 16 |