FFCP PHASE1:Hg19::chr2:231909404..231909405,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:231909404..231909405,+ | |||
|description=CAGE_peak_at_chr2:231909404..231909405,+ | |description=CAGE_peak_at_chr2:231909404..231909405,+ | ||
|id=chr2:231909404..231909405,+ | |id=chr2:231909404..231909405,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000083;1.38e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.22e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.27e-34;1!UBERON:0005425;4.27e-34;1!UBERON:0003056;2.45e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;4.27e-34;1!DOID:10165;4.27e-34;1!DOID:1798;4.27e-34;1!DOID:1793;1.38e-09;4!DOID:170;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.58e-34,1;DOID:10165,2.58e-34,1;DOID:1798,2.58e-34,1;DOID:1793,1.22e-09,4;DOID:170,7.58e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.90e-39!34;UBERON:0002791!3.50e-37!33;UBERON:0002780!5.13e-35!41;UBERON:0001890!5.13e-35!41;UBERON:0006240!5.13e-35!41;UBERON:0001869!1.94e-34!32;UBERON:0003080!4.79e-34!42;UBERON:0001049!3.23e-33!57;UBERON:0005068!3.23e-33!57;UBERON:0006241!3.23e-33!57;UBERON:0007135!3.23e-33!57;UBERON:0002020!2.04e-32!34;UBERON:0003528!2.04e-32!34;UBERON:0002616!3.14e-29!59;UBERON:0000073!8.83e-29!94;UBERON:0001016!8.83e-29!94;UBERON:0005743!1.86e-28!86;UBERON:0001017!2.64e-28!82;UBERON:0002346!7.67e-27!90;UBERON:0002619!3.40e-26!22;UBERON:0000956!4.69e-26!25;UBERON:0000203!4.69e-26!25;UBERON:0000955!8.83e-26!69;UBERON:0006238!8.83e-26!69;UBERON:0003056!1.43e-25!61;UBERON:0001950!5.00e-25!20;UBERON:0003075!1.18e-24!86;UBERON:0007284!1.18e-24!86;UBERON:0007023!1.30e-16!115;UBERON:0000924!1.06e-14!173;UBERON:0006601!1.06e-14!173;UBERON:0000033!1.11e-14!123;UBERON:0000153!1.19e-13!129;UBERON:0007811!1.19e-13!129;UBERON:0001871!1.68e-13!7;UBERON:0004121!3.29e-13!169;UBERON:0002420!3.60e-11!9;UBERON:0007245!3.60e-11!9;UBERON:0010009!3.60e-11!9;UBERON:0010011!3.60e-11!9;UBERON:0000454!3.60e-11!9;UBERON:0009663!3.38e-10!7;UBERON:0001872!5.60e-10!5;UBERON:0000025!4.19e-09!194;UBERON:0000200!2.22e-08!6;UBERON:0002308!7.41e-08!9;UBERON:0000125!7.41e-08!9;UBERON:0005162!1.31e-07!2;UBERON:0000122!1.31e-07!2;UBERON:0000369!6.30e-07!4;UBERON:0002435!6.30e-07!4;UBERON:0000204!6.30e-07!4;UBERON:0010082!6.30e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.27e-34;1!UBERON:0001785;4.27e-34;1!UBERON:0002464;4.27e-34;1!UBERON:0004904;4.27e-34;1!UBERON:0001021;4.27e-34;1!UBERON:0003714;8.34e-18;2!UBERON:0005162;8.34e-18;2!UBERON:0000122;8.34e-18;2!UBERON:0001987;1.38e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0001781,1.32e-09,4;UBERON:0001987,1.70e-09,4;UBERON:0004340,1.70e-09,4;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
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| ||
|short_description=p@chr2:231909404..231909405,+ | |short_description=p@chr2:231909404..231909405,+ | ||
}} | }} |
Latest revision as of 07:35, 29 July 2015
Short description: | p@chr2:231909404..231909405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231909404..231909405, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.22e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
layer of retina | 1.32e-09 | 4 |
placenta | 1.70e-09 | 4 |
allantois | 1.70e-09 | 4 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.58e-34 | 1 |
endocrine pancreas cancer | 2.58e-34 | 1 |
pancreatic endocrine carcinoma | 2.58e-34 | 1 |
pancreatic cancer | 1.22e-09 | 4 |
endocrine gland cancer | 7.58e-07 | 6 |