FFCP PHASE1:Hg19::chr2:66665142..66665151,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:66665142..66665151,+ to FFCP PHASE1:Hg19::chr2:66665142..66665151,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:66665142..66665151,+ | |||
|description=CAGE_peak_at_chr2:66665142..66665151,+ | |||
|id=chr2:66665142..66665151,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.72e-15;1!UBERON:0010227;6.21e-15;1!UBERON:0010226;6.21e-15;1!UBERON:0009143;1.61e-14;1!UBERON:0005754;1.61e-14;1!UBERON:0005062;3.85e-14;4!UBERON:0007284;3.85e-14;4!UBERON:0003104;1.73e-09;31!UBERON:0007297;6.57e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.61e-14;1!DOID:114;6.57e-08;2!DOID:3350;6.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.41e-14,1;DOID:114,4.69e-08,2;DOID:3350,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-14!115;UBERON:0007100!1.08e-09!27;UBERON:0001009!2.81e-08!113;UBERON:0006947!3.16e-07!3;UBERON:0004054!3.16e-07!3;UBERON:0005156!6.28e-07!59;UBERON:0000990!6.28e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.44e-25;25!UBERON:0004151;4.62e-19;3!UBERON:0003978;1.62e-18;3!UBERON:0000946;1.62e-18;3!UBERON:0000948;3.06e-15;22!UBERON:0002084;6.21e-15;1!UBERON:0002079;6.21e-15;1!UBERON:0002082;6.21e-15;1!UBERON:0000998;1.61e-14;1!UBERON:0002135;1.61e-14;1!UBERON:0002146;1.61e-14;1!UBERON:0006868;1.61e-14;1!UBERON:0005623;1.61e-14;1!UBERON:0002081;4.08e-08;2!UBERON:0002133;6.57e-08;2!UBERON:0003103;1.29e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.76e-24,27;UBERON:0004151,4.22e-19,3;UBERON:0003978,1.04e-18,3;UBERON:0009751,1.04e-18,3;UBERON:0000946,1.04e-18,3;UBERON:0002523,1.04e-18,3;UBERON:0005983,1.04e-18,3;UBERON:0002165,1.04e-18,3;UBERON:0002062,1.04e-18,3;UBERON:0007280,1.04e-18,3;UBERON:0004797,1.24e-17,7;UBERON:0002079,5.42e-15,1;UBERON:0003103,5.87e-15,68;UBERON:0002084,6.22e-15,1;UBERON:0002082,6.22e-15,1;UBERON:0010226,6.22e-15,1;UBERON:0002146,9.36e-15,1;UBERON:0005623,9.36e-15,1;UBERON:0002135,1.41e-14,1;UBERON:0000998,1.61e-14,1;UBERON:0006868,1.61e-14,1;UBERON:0000948,4.84e-14,24;UBERON:0005498,4.84e-14,24;UBERON:0004140,4.84e-14,24;UBERON:0009881,4.84e-14,24;UBERON:0004141,4.84e-14,24;UBERON:0003084,4.84e-14,24;UBERON:0007005,4.84e-14,24;UBERON:0004139,4.84e-14,24;UBERON:0004291,4.84e-14,24;UBERON:0007023,1.53e-10,114;UBERON:0001009,1.09e-08,112;UBERON:0002081,3.82e-08,2;UBERON:0010227,3.82e-08,2;UBERON:0002133,6.15e-08,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19168262731897,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459257792658427,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0.636406495851874,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,1.39641200636127,1.60412296808179,0,0.998395002494955,1.71690419254628,1.56220020209311,4.63565960158411,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,2.64836788146173,1.017074150619,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.591420599958536,0,0,0,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.549451649953598,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.977931553462932,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19168262731897,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459257792658427,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0.636406495851874,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,1.39641200636127,1.60412296808179,0,0.998395002494955,1.71690419254628,1.56220020209311,4.63565960158411,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,2.64836788146173,1.017074150619,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.591420599958536,0,0,0,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.549451649953598,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,1.27016115057279,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.977931553462932,0,0,0,0 | ||
|short_description=p@chr2:66665142..66665151,+ | |||
}} | }} |
Latest revision as of 11:32, 29 July 2015
Short description: | p@chr2:66665142..66665151, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:66665142..66665151, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.76e-24 | 27 |
cardiac chamber | 4.22e-19 | 3 |
valve | 1.04e-18 | 3 |
cardiac mesenchyme | 1.04e-18 | 3 |
cardial valve | 1.04e-18 | 3 |
tunica intima | 1.04e-18 | 3 |
heart layer | 1.04e-18 | 3 |
endocardium | 1.04e-18 | 3 |
endocardial cushion | 1.04e-18 | 3 |
presumptive endocardium | 1.04e-18 | 3 |
blood vessel layer | 1.24e-17 | 7 |
left cardiac atrium | 5.42e-15 | 1 |
compound organ | 5.87e-15 | 68 |
heart left ventricle | 6.22e-15 | 1 |
cardiac ventricle | 6.22e-15 | 1 |
future cardiac ventricle | 6.22e-15 | 1 |
pulmonary valve | 9.36e-15 | 1 |
semi-lunar valve | 9.36e-15 | 1 |
mitral valve | 1.41e-14 | 1 |
seminal vesicle | 1.61e-14 | 1 |
seminal fluid secreting gland | 1.61e-14 | 1 |
heart | 4.84e-14 | 24 |
primitive heart tube | 4.84e-14 | 24 |
primary heart field | 4.84e-14 | 24 |
anterior lateral plate mesoderm | 4.84e-14 | 24 |
heart tube | 4.84e-14 | 24 |
heart primordium | 4.84e-14 | 24 |
cardiac mesoderm | 4.84e-14 | 24 |
cardiogenic plate | 4.84e-14 | 24 |
heart rudiment | 4.84e-14 | 24 |
adult organism | 1.53e-10 | 114 |
circulatory system | 1.09e-08 | 112 |
cardiac atrium | 3.82e-08 | 2 |
future cardiac atrium | 3.82e-08 | 2 |
atrioventricular valve | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.41e-14 | 1 |
heart disease | 4.69e-08 | 2 |
mesenchymal cell neoplasm | 8.04e-08 | 2 |