FFCP PHASE1:Hg19::chr2:70313947..70313964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:70313947..70313964,+ | |||
|description=CAGE_peak_at_chr2:70313947..70313964,+ | |description=CAGE_peak_at_chr2:70313947..70313964,+ | ||
|id=chr2:70313947..70313964,+ | |id=chr2:70313947..70313964,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.07e-28!140;CL:0002087!7.22e-28!119;CL:0002031!1.33e-23!124;CL:0002057!1.40e-21!42;CL:0000037!8.18e-21!172;CL:0000566!8.18e-21!172;CL:0000860!5.94e-19!45;CL:0002032!8.80e-19!165;CL:0000837!8.80e-19!165;CL:0000988!1.09e-18!182;CL:0000542!3.01e-15!53;CL:0000051!3.01e-15!53;CL:0000838!9.81e-15!52;CL:0000766!4.82e-13!76;CL:0002194!1.03e-11!63;CL:0000576!1.03e-11!63;CL:0000040!1.03e-11!63;CL:0000559!1.03e-11!63;CL:0002009!1.65e-11!65;CL:0000557!3.18e-10!71;CL:0000945!3.66e-10!24;CL:0000826!3.66e-10!24;CL:0000839!5.20e-10!70;CL:0002393!9.54e-09!9;CL:0002397!9.54e-09!9 | |ontology_enrichment_celltype=CL:0000738!1.07e-28!140;CL:0002087!7.22e-28!119;CL:0002031!1.33e-23!124;CL:0002057!1.40e-21!42;CL:0000037!8.18e-21!172;CL:0000566!8.18e-21!172;CL:0000860!5.94e-19!45;CL:0002032!8.80e-19!165;CL:0000837!8.80e-19!165;CL:0000988!1.09e-18!182;CL:0000542!3.01e-15!53;CL:0000051!3.01e-15!53;CL:0000838!9.81e-15!52;CL:0000766!4.82e-13!76;CL:0002194!1.03e-11!63;CL:0000576!1.03e-11!63;CL:0000040!1.03e-11!63;CL:0000559!1.03e-11!63;CL:0002009!1.65e-11!65;CL:0000557!3.18e-10!71;CL:0000945!3.66e-10!24;CL:0000826!3.66e-10!24;CL:0000839!5.20e-10!70;CL:0002393!9.54e-09!9;CL:0002397!9.54e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0002393;3.82e-20;6!CL:0002397;3.82e-20;6!CL:0000945;1.96e-18;24!CL:0000775;4.04e-12;3!CL:0000766;2.33e-11;69!CL:0000875;3.87e-11;3!CL:0002396;3.87e-11;3!CL:0000576;4.86e-11;48!CL:0002087;1.81e-09;104!CL:0000542;9.35e-09;53!CL:0000094;7.85e-08;8!CL:0000815;1.04e-07;2!CL:0000792;1.04e-07;2!CL:0002677;1.04e-07;2 | |ontology_enrichment_celltype_v019=CL:0002393;3.82e-20;6!CL:0002397;3.82e-20;6!CL:0000945;1.96e-18;24!CL:0000775;4.04e-12;3!CL:0000766;2.33e-11;69!CL:0000875;3.87e-11;3!CL:0002396;3.87e-11;3!CL:0000576;4.86e-11;48!CL:0002087;1.81e-09;104!CL:0000542;9.35e-09;53!CL:0000094;7.85e-08;8!CL:0000815;1.04e-07;2!CL:0000792;1.04e-07;2!CL:0002677;1.04e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.91e-30,9;CL:0002397,1.91e-30,9;CL:0000738,9.27e-28,136;CL:0002087,4.20e-26,115;CL:0002031,1.14e-24,120;CL:0000037,1.58e-23,168;CL:0002032,1.72e-23,161;CL:0000837,1.72e-23,161;CL:0000988,7.62e-22,177;CL:0000860,9.63e-20,42;CL:0002057,9.63e-20,42;CL:0000945,2.21e-18,24;CL:0000826,2.21e-18,24;CL:0000473,9.52e-17,48;CL:0000234,9.52e-17,48;CL:0000766,4.67e-16,72;CL:0000838,4.28e-15,52;CL:0000542,9.87e-15,53;CL:0000051,9.87e-15,53;CL:0002194,1.42e-12,59;CL:0000576,1.42e-12,59;CL:0000040,1.42e-12,59;CL:0000559,1.42e-12,59;CL:0000775,2.84e-12,3;CL:0002009,4.89e-12,61;CL:0000875,1.44e-11,3;CL:0002396,1.44e-11,3;CL:0000839,7.69e-11,66;CL:0000557,1.27e-10,67;CL:0000763,3.89e-10,108;CL:0000049,3.89e-10,108;CL:0000094,6.65e-08,8;CL:0000815,1.01e-07,2;CL:0000792,1.01e-07,2;CL:0002677,1.01e-07,2;CL:0000785,1.47e-07,2;CL:0000955,1.47e-07,2;CL:0000818,1.47e-07,2;CL:0000954,1.47e-07,2;CL:0000816,1.47e-07,2;CL:0000134,1.61e-07,354;CL:0002320,3.40e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-13;42!CL:0000051;9.35e-09;53!CL:0000954;1.04e-07;2 | |ontology_enrichment_development_v019=CL:0002057;1.99e-13;42!CL:0000051;9.35e-09;53!CL:0000954;1.04e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.30e-13!102;UBERON:0003061!6.30e-13!102;UBERON:0002193!8.46e-12!112;UBERON:0002405!2.12e-11!115;UBERON:0002371!2.08e-10!80;UBERON:0001474!6.14e-10!86;UBERON:0004765!3.40e-07!101;UBERON:0001434!3.40e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!6.30e-13!102;UBERON:0003061!6.30e-13!102;UBERON:0002193!8.46e-12!112;UBERON:0002405!2.12e-11!115;UBERON:0002371!2.08e-10!80;UBERON:0001474!6.14e-10!86;UBERON:0004765!3.40e-07!101;UBERON:0001434!3.40e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.49e-15,93;UBERON:0002371,5.73e-13,76;UBERON:0002193,3.44e-12,108;UBERON:0001474,1.11e-11,82;UBERON:0002390,1.95e-11,98;UBERON:0003061,1.95e-11,98;UBERON:0004765,3.07e-10,90;UBERON:0001434,9.11e-09,100;UBERON:0002384,2.51e-07,371 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,1.29902789771517,0.985207073399349,1.33808328233255,0,0.767658796194425,0.309632246632152,0,0.6024118375565,0,1.31694240986513,0.568676929949686,1.17440175733939,2.21598163412751,1.80490002723128,1.51907609501096,0.447830948479849,0.647787332037959,0,0.436194716338694,0.755751887377619,0.727752183563449,0.464858073811369,1.6446715520873,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,2.06847408441971,0.645484683583826,2.70852973188684,0.941211697713023,0.818718450173537,0.674170453335254,1.22433556948361,0.641858054152187,0,0.659702600373432,0.797854630486527,1.27867425159808,0,0.56738522469114,0.622822248995575,0.502497330513487,1.0429658368404,0.65156653411535,0,0.368277635987565,1.26584954976354,1.05627643155971,1.70083439972035,1.88692780957538,1.68492946719743,0.600707571366025,0.964353520182481,1.71007646244749,2.38700012638908,1.82664153764634,0,1.09227722252426,0.889509253863555,3.41384178053206,0.400395987036012,0.574752439954483,1.32208974556972,0,0,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0.786021525498329,0.411202997999018,0,1.30368906653436,0.946895611469467,0,0.445641827540694,1.47302953737419,1.10766947291811,0.812411591295047,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0.253019692019503,0,0.651083453856419,0.950452044448374,0.301150238155546,0,0,0,1.64225599384209,0.403213486449465,0.534880391567015,0.724122019413995,0,0.670700859703636,0,0.361439152384566,0,0,0,0.973269740605272,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,10.5424333948851,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0.975789649036763,0.662648841607426,0.464775771478074,0.621966330092223,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.94064817373566,0.77005821767849,0,0,0,0.167516265334349,0,2.99602809578873,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.862856803274467,0.74709290462411,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0.822724546172388,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0.490080431962063,0.743212700502875,0.28853842595289,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0,0,0,1.37402137902306,0,0,0.333698283423817,0.390776190804081,0,0,0,0,0,0.37428108081644,0,0,0,0,0.95497793895076,0.296964680832639,0.307160702099232,0.994147647766298,0,0,0.16480387422676,0,0.398495976502139,1.93398740871803,0,0.20453736500431,1.96935688737711,0,0.0898683511473268,0.358042349351218,0,0,0,1.11136990144637,0,0.0927680981618513,0,1.30213880542617,0.262379999988587,0,0,0.762760950878299,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0.265372693510018,0,0.296521128680622,0,0,0.134802265961354,0,0,1.64209310294099,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.979923974143776,0.34823682632161,0.17472666824203,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.0633107959558787,0.195551382734803,0.400794101257669,0.85381197895741,0.39961921916426,0,0,0.686379991447858,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,3.49487848582361,1.02418136999391,0.824158583811665,0.606631894687664,0.295282444544246,0.254019996197353,0,0,2.25054407851027,1.2378549293751,0.83088067605837,0.2249738915515,0,0.0607495566580247,0.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| ||
|short_description=p@chr2:70313947..70313964,+ | |short_description=p@chr2:70313947..70313964,+ | ||
}} | }} |
Latest revision as of 11:53, 29 July 2015
Short description: | p@chr2:70313947..70313964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:70313947..70313964, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 4.49e-15 | 93 |
bone marrow | 5.73e-13 | 76 |
hemolymphoid system | 3.44e-12 | 108 |
bone element | 1.11e-11 | 82 |
hematopoietic system | 1.95e-11 | 98 |
blood island | 1.95e-11 | 98 |
skeletal element | 3.07e-10 | 90 |
skeletal system | 9.11e-09 | 100 |
connective tissue | 2.51e-07 | 371 |