FFCP PHASE1:Hg19::chr2:89161568..89161575,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-133bp_to_ENST00000418209_5end | |association_with_transcript=-133bp_to_ENST00000418209_5end | ||
|cluster_id=chr2:89161568..89161575,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_4_at_ENST00000418209_5end | |description=CAGE_peak_4_at_ENST00000418209_5end | ||
|id=chr2:89161568..89161575,- | |id=chr2:89161568..89161575,- | ||
|ontology_enrichment_celltype=CL:0000236!5.96e-42!14;CL:0000945!1.25e-29!24;CL:0000826!1.25e-29!24;CL:0000784!4.26e-24!3;CL:0000838!6.58e-22!52;CL:0000542!1.89e-21!53;CL:0000051!1.89e-21!53;CL:0000738!7.63e-14!140;CL:0000037!1.19e-10!172;CL:0000566!1.19e-10!172;CL:0000767!1.46e-10!3;CL:0000988!6.97e-10!182;CL:0002087!1.25e-09!119;CL:0002031!3.85e-09!124;CL:0000819!4.52e-09!1;CL:0002032!1.78e-08!165;CL:0000837!1.78e-08!165;CL:0000451!6.27e-07!10 | |ontology_enrichment_celltype=CL:0000236!5.96e-42!14;CL:0000945!1.25e-29!24;CL:0000826!1.25e-29!24;CL:0000784!4.26e-24!3;CL:0000838!6.58e-22!52;CL:0000542!1.89e-21!53;CL:0000051!1.89e-21!53;CL:0000738!7.63e-14!140;CL:0000037!1.19e-10!172;CL:0000566!1.19e-10!172;CL:0000767!1.46e-10!3;CL:0000988!6.97e-10!182;CL:0002087!1.25e-09!119;CL:0002031!3.85e-09!124;CL:0000819!4.52e-09!1;CL:0002032!1.78e-08!165;CL:0000837!1.78e-08!165;CL:0000451!6.27e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000784;9.59e-51;3!CL:0000236;3.67e-45;13!CL:0000945;4.51e-33;24!CL:0000785;4.44e-18;1!CL:0000819;4.44e-18;1!CL:0000542;7.06e-17;53!CL:0000451;2.15e-14;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.85e-51,3;CL:0000236,8.69e-42,14;CL:0000945,5.09e-33,24;CL:0000826,5.09e-33,24;CL:0000838,1.11e-19,52;CL:0000542,2.67e-19,53;CL:0000051,2.67e-19,53;CL:0000819,6.23e-18,1;CL:0000451,1.96e-14,10;CL:0000738,8.94e-14,136;CL:0000037,5.38e-11,168;CL:0002087,8.11e-11,115;CL:0000988,2.16e-10,177;CL:0002031,2.44e-10,120;CL:0000785,1.22e-09,2;CL:0000955,1.22e-09,2;CL:0000818,1.22e-09,2;CL:0000954,1.22e-09,2;CL:0000816,1.22e-09,2;CL:0002032,1.60e-07,161;CL:0000837,1.60e-07,161;CL:0000817,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.12e-17;1!CL:0000051;7.06e-17;53!CL:0000954;1.03e-09;2!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease=DOID:0060073!4.52e-09!1;DOID:8675!4.52e-09!1;DOID:0060058!1.78e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.44e-18;1!DOID:8675;4.44e-18;1!DOID:0060058;1.39e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.23e-18,1;DOID:8675,6.23e-18,1;DOID:0060058,1.43e-15,10 | |||
|ontology_enrichment_uberon=UBERON:0000941!5.28e-09!1;UBERON:0004904!5.28e-09!1;UBERON:0002464!5.28e-09!1;UBERON:0001021!5.28e-09!1;UBERON:0001785!5.28e-09!1;UBERON:0001154!9.74e-09!1;UBERON:0001153!9.74e-09!1;UBERON:0001831!1.05e-08!1;UBERON:0001567!1.05e-08!1;UBERON:0008801!1.05e-08!1;UBERON:0002372!1.53e-08!1;UBERON:0001961!1.53e-08!1;UBERON:0001744!1.53e-08!1;UBERON:0001735!1.53e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,1.28019066769952,0.400395987036012,1.14950487990897,0,2.86216126360609,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,7.43593384014166,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22886768554957,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,1.28019066769952,0.400395987036012,1.14950487990897,0,2.86216126360609,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,7.43593384014166,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22886768554957,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.18945747058799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592834895693833,1.94868157409433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ENST00000418209 | |short_description=p4@ENST00000418209 | ||
}} | }} |
Latest revision as of 13:05, 29 July 2015
Short description: | p4@ENST00000418209 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000418209_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -133bp_to_ENST00000418209_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.85e-51 | 3 |
B cell | 8.69e-42 | 14 |
lymphocyte of B lineage | 5.09e-33 | 24 |
pro-B cell | 5.09e-33 | 24 |
lymphoid lineage restricted progenitor cell | 1.11e-19 | 52 |
lymphocyte | 2.67e-19 | 53 |
common lymphoid progenitor | 2.67e-19 | 53 |
B-1 B cell | 6.23e-18 | 1 |
dendritic cell | 1.96e-14 | 10 |
leukocyte | 8.94e-14 | 136 |
hematopoietic stem cell | 5.38e-11 | 168 |
nongranular leukocyte | 8.11e-11 | 115 |
hematopoietic cell | 2.16e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 2.44e-10 | 120 |
mature B cell | 1.22e-09 | 2 |
pre-B-II cell | 1.22e-09 | 2 |
transitional stage B cell | 1.22e-09 | 2 |
small pre-B-II cell | 1.22e-09 | 2 |
immature B cell | 1.22e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.60e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-07 | 161 |
precursor B cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.72e-18 | 1 |
cranial nerve | 8.72e-18 | 1 |
nerve trunk | 8.72e-18 | 1 |
nerve connecting eye with brain | 8.72e-18 | 1 |
nerve | 8.72e-18 | 1 |
retinal neural layer | 8.72e-18 | 1 |
presumptive neural retina | 8.72e-18 | 1 |
neural tissue | 1.44e-09 | 2 |
multi cell component structure | 1.44e-09 | 2 |
neuron projection bundle | 1.44e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.23e-18 | 1 |
lymphosarcoma | 6.23e-18 | 1 |
lymphoma | 1.43e-15 | 10 |