FFCP PHASE1:Hg19::chr2:92269597..92269622,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:92269597..92269622,+ | |||
|coexpression_cluster_id=C319 | |coexpression_cluster_id=C319 | ||
|description=CAGE_peak_at_chr2:92269597..92269622,+ | |description=CAGE_peak_at_chr2:92269597..92269622,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!3.22e-11!5;CL:0002274!2.51e-10!5;CL:0000457!2.51e-10!5;CL:0002191!2.51e-10!5;CL:0000097!2.51e-10!5;CL:0000831!2.51e-10!5;CL:0002028!2.51e-10!5;CL:0002032!9.20e-10!165;CL:0000837!9.20e-10!165;CL:0000763!1.29e-09!112;CL:0000049!1.29e-09!112;CL:0000037!1.51e-09!172;CL:0000566!1.51e-09!172;CL:0002031!3.59e-09!124;CL:0000988!1.94e-08!182;CL:0000839!5.16e-08!70;CL:0000557!5.37e-08!71;CL:0000738!5.83e-08!140 | |ontology_enrichment_celltype=CL:0000453!3.22e-11!5;CL:0002274!2.51e-10!5;CL:0000457!2.51e-10!5;CL:0002191!2.51e-10!5;CL:0000097!2.51e-10!5;CL:0000831!2.51e-10!5;CL:0002028!2.51e-10!5;CL:0002032!9.20e-10!165;CL:0000837!9.20e-10!165;CL:0000763!1.29e-09!112;CL:0000049!1.29e-09!112;CL:0000037!1.51e-09!172;CL:0000566!1.51e-09!172;CL:0002031!3.59e-09!124;CL:0000988!1.94e-08!182;CL:0000839!5.16e-08!70;CL:0000557!5.37e-08!71;CL:0000738!5.83e-08!140 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.51e-19;5!CL:0000898;3.36e-11;3!CL:0000990;1.36e-10;8!CL:0001014;5.39e-09;2!CL:0001016;5.39e-09;2!CL:0000451;1.33e-08;10!CL:0000815;4.21e-08;2!CL:0000792;4.21e-08;2!CL:0002677;4.21e-08;2!CL:0000097;2.37e-07;5 | |ontology_enrichment_celltype_v019=CL:0000453;2.51e-19;5!CL:0000898;3.36e-11;3!CL:0000990;1.36e-10;8!CL:0001014;5.39e-09;2!CL:0001016;5.39e-09;2!CL:0000451;1.33e-08;10!CL:0000815;4.21e-08;2!CL:0000792;4.21e-08;2!CL:0002677;4.21e-08;2!CL:0000097;2.37e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.79e-19,5;CL:0000898,5.08e-11,3;CL:0000990,1.14e-10,8;CL:0001014,5.30e-09,2;CL:0001016,5.30e-09,2;CL:0000451,1.15e-08,10;CL:0002032,3.75e-08,161;CL:0000837,3.75e-08,161;CL:0000815,5.05e-08,2;CL:0000792,5.05e-08,2;CL:0002677,5.05e-08,2;CL:0000763,7.16e-08,108;CL:0000049,7.16e-08,108;CL:0000037,1.39e-07,168;CL:0000097,2.06e-07,5;CL:0002028,2.06e-07,5;CL:0000988,6.33e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.37e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!3.37e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.512321413058201,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,76.2803373318045,0,0,0.633765858935825,10.8428192982172,0.419317291016752,1.01095768031846,0.901061357049038,2.73233497385036,0,6.16641699317179,0.365328307529268,0,2.18455444504853,0,0.853460445133014,0.800791974072025,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,2.00623794468814,1.30368906653436,5.20792586308207,1.94826728407911,0.557052284425868,2.06224135232386,2.21533894583621,6.49929273036037,0.384273959177026,0.910415432919148,2.13769275984779,0.829050053357545,2.31842468588042,4.15202376853769,8.29376567078111,0,1.35971211237079,1.14966148080576,2.40539211837841,10.1207876807801,0,0.651083453856419,0.950452044448374,0,1.15187950038977,0,2.13099526839615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83986624358335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18143432568886,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,8.39447925874409,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.674156540800822,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,7.72055146343365,0,0,0,0,0,0,0,2.43453850447661,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0,0.985326475791887,0.880484340132261,10.5737338925794,5.76479813667846,1.76739406796932,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43335757932127,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,25.5175500661265,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2276957863045,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01869918720213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,4.15892921391749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53204296105893,0,1.29848776109822,0,0,0,35.0888267926094,0.338583555603207,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.321506296930038,0.137539436597234,0,7.19916452964801,10.8332273638113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.029942236436,1.99297260470045,6.37905037597792,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0,0,0,0,0,15.704636228507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,15.5382920925095,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.512321413058201,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,76.2803373318045,0,0,0.633765858935825,10.8428192982172,0.419317291016752,1.01095768031846,0.901061357049038,2.73233497385036,0,6.16641699317179,0.365328307529268,0,2.18455444504853,0,0.853460445133014,0.800791974072025,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,2.00623794468814,1.30368906653436,5.20792586308207,1.94826728407911,0.557052284425868,2.06224135232386,2.21533894583621,6.49929273036037,0.384273959177026,0.910415432919148,2.13769275984779,0.829050053357545,2.31842468588042,4.15202376853769,8.29376567078111,0,1.35971211237079,1.14966148080576,2.40539211837841,10.1207876807801,0,0.651083453856419,0.950452044448374,0,1.15187950038977,0,2.13099526839615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83986624358335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18143432568886,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,8.39447925874409,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.674156540800822,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,7.72055146343365,0,0,0,0,0,0,0,2.43453850447661,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0,0.985326475791887,0.880484340132261,10.5737338925794,5.76479813667846,1.76739406796932,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43335757932127,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,25.5175500661265,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2276957863045,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75407901316748,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.01869918720213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27947376023316,0,0,0,4.15892921391749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53204296105893,0,1.29848776109822,0,0,0,35.0888267926094,0.338583555603207,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.321506296930038,0.137539436597234,0,7.19916452964801,10.8332273638113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.029942236436,1.99297260470045,6.37905037597792,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8339315265117,0,0,0,0,0,15.704636228507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60710550763486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,15.5382920925095,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:92269597..92269622,+ | |short_description=p@chr2:92269597..92269622,+ | ||
}} | }} |
Latest revision as of 13:08, 29 July 2015
Short description: | p@chr2:92269597..92269622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:92269597..92269622, + |
Coexpression cluster: | C319_CD14_Neural_Hepatocyte_Neurons_optic_heart_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.79e-19 | 5 |
naive T cell | 5.08e-11 | 3 |
conventional dendritic cell | 1.14e-10 | 8 |
CD1a-positive Langerhans cell | 5.30e-09 | 2 |
immature CD1a-positive Langerhans cell | 5.30e-09 | 2 |
dendritic cell | 1.15e-08 | 10 |
hematopoietic oligopotent progenitor cell | 3.75e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.75e-08 | 161 |
regulatory T cell | 5.05e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.05e-08 | 2 |
naive regulatory T cell | 5.05e-08 | 2 |
myeloid cell | 7.16e-08 | 108 |
common myeloid progenitor | 7.16e-08 | 108 |
hematopoietic stem cell | 1.39e-07 | 168 |
mast cell | 2.06e-07 | 5 |
basophil mast progenitor cell | 2.06e-07 | 5 |
hematopoietic cell | 6.33e-07 | 177 |