FFCP PHASE1:Hg19::chr3:114234866..114234870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:114234866..114234870,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr3:114234866..114234870,+ | |description=CAGE_peak_at_chr3:114234866..114234870,+ | ||
|id=chr3:114234866..114234870,+ | |id=chr3:114234866..114234870,+ | ||
|ontology_enrichment_celltype=CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6 | |ontology_enrichment_celltype=CL:0000342!1.15e-09!1;CL:0002565!1.15e-09!1;CL:0002274!1.77e-07!5;CL:0000457!1.77e-07!5;CL:0002191!1.77e-07!5;CL:0000097!1.77e-07!5;CL:0000831!1.77e-07!5;CL:0002028!1.77e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.32e-09,6;CL:0000031,1.32e-09,6;CL:0000404,1.32e-09,6;CL:0000047,1.59e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3!CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0000010;8.37e-07;8 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000941!4.46e-10!1;UBERON:0004904!4.46e-10!1;UBERON:0002464!4.46e-10!1;UBERON:0001021!4.46e-10!1;UBERON:0001785!4.46e-10!1;UBERON:0005418!5.31e-10!1;UBERON:0001389!5.31e-10!1;UBERON:0000026!5.31e-10!1;UBERON:0008784!5.31e-10!1;UBERON:0006058!5.31e-10!1;UBERON:0003663!5.31e-10!1;UBERON:0001383!5.31e-10!1;UBERON:0004256!5.31e-10!1;UBERON:0002529!5.31e-10!1;UBERON:0004708!5.31e-10!1;UBERON:0002101!5.31e-10!1;UBERON:0004709!5.31e-10!1;UBERON:0003661!5.31e-10!1;UBERON:0002471!5.31e-10!1;UBERON:0004357!5.31e-10!1;UBERON:0009872!5.31e-10!1;UBERON:0004347!5.31e-10!1;UBERON:0005420!5.31e-10!1;UBERON:0005732!5.31e-10!1;UBERON:0006057!5.31e-10!1;UBERON:0000978!5.31e-10!1;UBERON:0002103!5.31e-10!1;UBERON:0001665!5.31e-10!1;UBERON:0003823!5.31e-10!1;UBERON:0000154!5.31e-10!1;UBERON:0005733!5.31e-10!1;UBERON:0005730!5.31e-10!1;UBERON:0002146!7.50e-10!1;UBERON:0005623!7.50e-10!1;UBERON:0002506!1.15e-09!1;UBERON:0001769!1.15e-09!1;UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.99e-50,1;UBERON:0001785,3.99e-50,1;UBERON:0002464,3.99e-50,1;UBERON:0004904,3.99e-50,1;UBERON:0001021,3.99e-50,1;UBERON:0003902,3.99e-50,1;UBERON:0005425,3.99e-50,1;UBERON:0003714,7.14e-26,2;UBERON:0005162,7.14e-26,2;UBERON:0000122,7.14e-26,2;UBERON:0001781,1.13e-13,4;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000010,8.37e-07,8 | |||
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|short_description=p@chr3:114234866..114234870,+ | |short_description=p@chr3:114234866..114234870,+ | ||
}} | }} |
Latest revision as of 14:32, 29 July 2015
Short description: | p@chr3:114234866..114234870, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:114234866..114234870, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.32e-09 | 6 |
neuroblast | 1.32e-09 | 6 |
electrically signaling cell | 1.32e-09 | 6 |
neuronal stem cell | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.99e-50 | 1 |
cranial nerve | 3.99e-50 | 1 |
nerve trunk | 3.99e-50 | 1 |
nerve connecting eye with brain | 3.99e-50 | 1 |
nerve | 3.99e-50 | 1 |
retinal neural layer | 3.99e-50 | 1 |
presumptive neural retina | 3.99e-50 | 1 |
neural tissue | 7.14e-26 | 2 |
multi cell component structure | 7.14e-26 | 2 |
neuron projection bundle | 7.14e-26 | 2 |
layer of retina | 1.13e-13 | 4 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
peripheral nervous system | 8.37e-07 | 8 |