FFCP PHASE1:Hg19::chr3:156534175..156534191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:156534175..156534191,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr3:156534175..156534191,+ | |description=CAGE_peak_at_chr3:156534175..156534191,+ | ||
|id=chr3:156534175..156534191,+ | |id=chr3:156534175..156534191,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.36e-38!42;CL:0000860!1.96e-34!45;CL:0000557!2.55e-25!71;CL:0000766!1.39e-22!76;CL:0002009!1.70e-22!65;CL:0000839!4.50e-21!70;CL:0002194!2.24e-20!63;CL:0000576!2.24e-20!63;CL:0000040!2.24e-20!63;CL:0000559!2.24e-20!63;CL:0002320!2.37e-18!365;CL:0000134!4.26e-18!358;CL:0000763!9.31e-16!112;CL:0000049!9.31e-16!112;CL:0000738!4.23e-15!140;CL:0000219!2.05e-14!390;CL:0000048!1.04e-13!430;CL:0000723!4.28e-13!436;CL:0000034!6.93e-13!444;CL:0002031!9.67e-13!124;CL:0002087!4.16e-11!119;CL:0000037!3.99e-10!172;CL:0000566!3.99e-10!172;CL:0002032!5.27e-10!165;CL:0000837!5.27e-10!165;CL:0000988!9.08e-09!182;CL:0002371!6.92e-07!591;CL:0000063!9.07e-07!578 | |ontology_enrichment_celltype=CL:0002057!7.36e-38!42;CL:0000860!1.96e-34!45;CL:0000557!2.55e-25!71;CL:0000766!1.39e-22!76;CL:0002009!1.70e-22!65;CL:0000839!4.50e-21!70;CL:0002194!2.24e-20!63;CL:0000576!2.24e-20!63;CL:0000040!2.24e-20!63;CL:0000559!2.24e-20!63;CL:0002320!2.37e-18!365;CL:0000134!4.26e-18!358;CL:0000763!9.31e-16!112;CL:0000049!9.31e-16!112;CL:0000738!4.23e-15!140;CL:0000219!2.05e-14!390;CL:0000048!1.04e-13!430;CL:0000723!4.28e-13!436;CL:0000034!6.93e-13!444;CL:0002031!9.67e-13!124;CL:0002087!4.16e-11!119;CL:0000037!3.99e-10!172;CL:0000566!3.99e-10!172;CL:0002032!5.27e-10!165;CL:0000837!5.27e-10!165;CL:0000988!9.08e-09!182;CL:0002371!6.92e-07!591;CL:0000063!9.07e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.09e-44;33!CL:0002057;2.09e-44;33!CL:0000473;6.70e-31;39!CL:0000234;6.70e-31;39!CL:0000576;6.88e-28;48!CL:0000766;6.53e-20;69!CL:0000763;6.95e-12;100!CL:0000767;1.35e-10;3!CL:0002582;5.18e-10;3!CL:0002393;7.80e-09;6!CL:0002397;7.80e-09;6!CL:0001014;3.31e-08;2!CL:0001016;3.31e-08;2!CL:0002087;6.25e-07;104!CL:0000453;9.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.51e-52,42;CL:0002057,9.51e-52,42;CL:0000473,2.34e-44,48;CL:0000234,2.34e-44,48;CL:0000557,7.21e-43,67;CL:0000766,4.74e-39,72;CL:0002009,1.60e-38,61;CL:0000839,9.98e-35,66;CL:0002194,5.09e-34,59;CL:0000576,5.09e-34,59;CL:0000040,5.09e-34,59;CL:0000559,5.09e-34,59;CL:0000763,3.89e-31,108;CL:0000049,3.89e-31,108;CL:0000738,1.03e-22,136;CL:0002031,3.09e-20,120;CL:0002032,3.51e-19,161;CL:0000837,3.51e-19,161;CL:0000037,5.29e-18,168;CL:0000988,1.26e-16,177;CL:0002087,1.90e-15,115;CL:0000134,8.70e-15,354;CL:0002320,2.88e-14,361;CL:0000219,1.93e-12,386;CL:0000048,1.12e-11,427;CL:0000034,1.18e-11,441;CL:0000723,2.40e-11,433;CL:0000767,7.32e-11,3;CL:0002582,2.56e-10,3;CL:0001014,3.26e-08,2;CL:0001016,3.26e-08,2;CL:0000453,8.76e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-38;42!CL:0000049;6.75e-10;108 | |||
|ontology_enrichment_disease=DOID:2394!5.79e-08!14 | |ontology_enrichment_disease=DOID:2394!5.79e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.29e-23!80;UBERON:0001474!2.76e-22!86;UBERON:0004765!1.24e-21!101;UBERON:0001434!1.24e-21!101;UBERON:0002390!2.62e-17!102;UBERON:0003061!2.62e-17!102;UBERON:0002384!4.86e-17!375;UBERON:0002193!3.23e-15!112;UBERON:0002405!1.60e-14!115;UBERON:0002204!6.98e-12!167;UBERON:0002118!4.14e-07!5;UBERON:0004532!4.14e-07!5 | |ontology_enrichment_uberon=UBERON:0002371!1.29e-23!80;UBERON:0001474!2.76e-22!86;UBERON:0004765!1.24e-21!101;UBERON:0001434!1.24e-21!101;UBERON:0002390!2.62e-17!102;UBERON:0003061!2.62e-17!102;UBERON:0002384!4.86e-17!375;UBERON:0002193!3.23e-15!112;UBERON:0002405!1.60e-14!115;UBERON:0002204!6.98e-12!167;UBERON:0002118!4.14e-07!5;UBERON:0004532!4.14e-07!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.66e-39,76;UBERON:0001474,1.67e-38,82;UBERON:0004765,2.49e-34,90;UBERON:0002405,8.82e-31,93;UBERON:0001434,4.77e-30,100;UBERON:0002390,8.68e-29,98;UBERON:0003061,8.68e-29,98;UBERON:0002193,2.35e-25,108;UBERON:0002204,6.85e-17,167;UBERON:0002384,1.47e-13,371;UBERON:0003081,2.72e-13,203;UBERON:0000926,2.38e-07,315;UBERON:0004120,2.38e-07,315;UBERON:0006603,2.38e-07,315 | |||
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|short_description=p@chr3:156534175..156534191,+ | |short_description=p@chr3:156534175..156534191,+ | ||
}} | }} |
Latest revision as of 17:28, 29 July 2015
Short description: | p@chr3:156534175..156534191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:156534175..156534191, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.66e-39 | 76 |
bone element | 1.67e-38 | 82 |
skeletal element | 2.49e-34 | 90 |
immune system | 8.82e-31 | 93 |
skeletal system | 4.77e-30 | 100 |
hematopoietic system | 8.68e-29 | 98 |
blood island | 8.68e-29 | 98 |
hemolymphoid system | 2.35e-25 | 108 |
musculoskeletal system | 6.85e-17 | 167 |
connective tissue | 1.47e-13 | 371 |
lateral plate mesoderm | 2.72e-13 | 203 |
mesoderm | 2.38e-07 | 315 |
mesoderm-derived structure | 2.38e-07 | 315 |
presumptive mesoderm | 2.38e-07 | 315 |