FFCP PHASE1:Hg19::chr3:170908570..170908576,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:170908570..170908576,-
|short_description=p@chr3:170908570..170908576,-
|description=CAGE_peak_at_chr3:170908570..170908576,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:170908570..170908576,- | |||
|description=CAGE_peak_at_chr3:170908570..170908576,- | |||
|id=chr3:170908570..170908576,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;4.56e-10;3!CL:0000623;8.55e-10;3!CL:0002591;2.19e-08;1!CL:0002581;5.77e-08;1!CL:0000895;5.77e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.65e-10,3;CL:0000623,6.28e-10,3;CL:0000825,6.28e-10,3;CL:0002591,2.52e-08,1;CL:0000810,3.11e-08,1;CL:0000895,3.11e-08,1;CL:0002436,3.11e-08,1;CL:0002427,3.11e-08,1;CL:0002428,3.11e-08,1;CL:0002429,3.11e-08,1;CL:0002433,3.11e-08,1;CL:0002431,3.11e-08,1;CL:0002432,3.11e-08,1;CL:0002581,5.05e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002427;5.77e-08;1!UBERON:0005425;5.77e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-19!115;UBERON:0001049!9.50e-19!57;UBERON:0005068!9.50e-19!57;UBERON:0006241!9.50e-19!57;UBERON:0007135!9.50e-19!57;UBERON:0005743!5.72e-16!86;UBERON:0002020!5.96e-16!34;UBERON:0003528!5.96e-16!34;UBERON:0000073!8.10e-16!94;UBERON:0001016!8.10e-16!94;UBERON:0002780!2.05e-15!41;UBERON:0001890!2.05e-15!41;UBERON:0006240!2.05e-15!41;UBERON:0002616!2.51e-15!59;UBERON:0001893!2.62e-15!34;UBERON:0001017!3.79e-15!82;UBERON:0002791!8.08e-15!33;UBERON:0003075!8.41e-15!86;UBERON:0007284!8.41e-15!86;UBERON:0003080!9.23e-15!42;UBERON:0001869!2.05e-14!32;UBERON:0000955!4.09e-14!69;UBERON:0006238!4.09e-14!69;UBERON:0002346!2.46e-13!90;UBERON:0002619!5.54e-13!22;UBERON:0000956!5.98e-13!25;UBERON:0000203!5.98e-13!25;UBERON:0001950!1.87e-11!20;UBERON:0003056!7.19e-10!61;UBERON:0000153!1.79e-08!129;UBERON:0007811!1.79e-08!129;UBERON:0000033!2.71e-07!123;UBERON:0004121!4.75e-07!169;UBERON:0000025!9.24e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.38e-11;20!UBERON:0002619;5.40e-10;22!UBERON:0002791;6.71e-09;32!UBERON:0000956;8.85e-09;25!UBERON:0000203;8.85e-09;25!UBERON:0003528;1.09e-08;34!UBERON:0002020;1.09e-08;34!UBERON:0001869;2.19e-08;32!UBERON:0002426;2.19e-08;1!UBERON:0003831;2.19e-08;1!UBERON:0003898;2.19e-08;1!UBERON:0004830;2.19e-08;1!UBERON:0003830;2.19e-08;1!UBERON:0005175;2.19e-08;1!UBERON:0001774;2.19e-08;1!UBERON:0001103;2.19e-08;1!UBERON:0001874;5.77e-08;1!UBERON:0000941;5.77e-08;1!UBERON:0001785;5.77e-08;1!UBERON:0002464;5.77e-08;1!UBERON:0004904;5.77e-08;1!UBERON:0001021;5.77e-08;1!UBERON:0001893;1.53e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.30e-11,20;UBERON:0002619,4.41e-10,22;UBERON:0002791,3.62e-09,32;UBERON:0001869,3.62e-09,32;UBERON:0002780,4.22e-09,41;UBERON:0001890,4.22e-09,41;UBERON:0003080,4.22e-09,41;UBERON:0006240,4.22e-09,41;UBERON:0000956,7.42e-09,25;UBERON:0000203,7.42e-09,25;UBERON:0003528,1.35e-08,34;UBERON:0002020,1.35e-08,34;UBERON:0001893,1.35e-08,34;UBERON:0002426,2.04e-08,1;UBERON:0003831,2.04e-08,1;UBERON:0003898,2.04e-08,1;UBERON:0004830,2.04e-08,1;UBERON:0003830,2.04e-08,1;UBERON:0005175,2.04e-08,1;UBERON:0001774,2.04e-08,1;UBERON:0001103,2.04e-08,1;UBERON:0010084,2.04e-08,1;UBERON:0000941,6.19e-08,1;UBERON:0001785,6.19e-08,1;UBERON:0002464,6.19e-08,1;UBERON:0004904,6.19e-08,1;UBERON:0001021,6.19e-08,1;UBERON:0003902,6.19e-08,1;UBERON:0005425,6.19e-08,1;UBERON:0001874,6.63e-08,1;UBERON:0003056,2.49e-07,61;UBERON:0000073,7.89e-07,53;UBERON:0002616,7.89e-07,53 | |||
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| ||
|short_description=p@chr3:170908570..170908576,- | |||
}} | }} |
Latest revision as of 18:13, 29 July 2015
Short description: | p@chr3:170908570..170908576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170908570..170908576, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.65e-10 | 3 |
natural killer cell | 6.28e-10 | 3 |
pro-NK cell | 6.28e-10 | 3 |
smooth muscle cell of the pulmonary artery | 2.52e-08 | 1 |
CD4-positive, alpha-beta thymocyte | 3.11e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.11e-08 | 1 |
mature CD4 single-positive thymocyte | 3.11e-08 | 1 |
resting double-positive thymocyte | 3.11e-08 | 1 |
double-positive blast | 3.11e-08 | 1 |
CD69-positive double-positive thymocyte | 3.11e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.11e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.11e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.11e-08 | 1 |
perirenal preadipocyte | 5.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 4.30e-11 | 20 |
regional part of cerebral cortex | 4.41e-10 | 22 |
regional part of telencephalon | 3.62e-09 | 32 |
cerebral hemisphere | 3.62e-09 | 32 |
regional part of forebrain | 4.22e-09 | 41 |
forebrain | 4.22e-09 | 41 |
anterior neural tube | 4.22e-09 | 41 |
future forebrain | 4.22e-09 | 41 |
cerebral cortex | 7.42e-09 | 25 |
pallium | 7.42e-09 | 25 |
brain grey matter | 1.35e-08 | 34 |
gray matter | 1.35e-08 | 34 |
telencephalon | 1.35e-08 | 34 |
chest muscle | 2.04e-08 | 1 |
respiratory system muscle | 2.04e-08 | 1 |
skeletal muscle of trunk | 2.04e-08 | 1 |
respiratory system skeletal muscle | 2.04e-08 | 1 |
thoracic segment muscle | 2.04e-08 | 1 |
chest organ | 2.04e-08 | 1 |
muscle of trunk | 2.04e-08 | 1 |
diaphragm | 2.04e-08 | 1 |
future diaphragm | 2.04e-08 | 1 |
cranial nerve II | 6.19e-08 | 1 |
cranial nerve | 6.19e-08 | 1 |
nerve trunk | 6.19e-08 | 1 |
nerve connecting eye with brain | 6.19e-08 | 1 |
nerve | 6.19e-08 | 1 |
retinal neural layer | 6.19e-08 | 1 |
presumptive neural retina | 6.19e-08 | 1 |
putamen | 6.63e-08 | 1 |
pre-chordal neural plate | 2.49e-07 | 61 |
regional part of nervous system | 7.89e-07 | 53 |
regional part of brain | 7.89e-07 | 53 |