FFCP PHASE1:Hg19::chr3:177430474..177430476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:177430474..177430476,+ | |||
|description=CAGE_peak_at_chr3:177430474..177430476,+ | |description=CAGE_peak_at_chr3:177430474..177430476,+ | ||
|id=chr3:177430474..177430476,+ | |id=chr3:177430474..177430476,+ | ||
|ontology_enrichment_celltype=CL:0000197;7.51e-50;6!CL:0000098;7.51e-50;6!CL:0002167;7.51e-50;6!CL:0000710;1.29e-15;20!CL:0002615;2.74e-12;3!CL:0000075;8.94e-12;27!CL:0002077;1.51e-08;34 | |ontology_enrichment_celltype=CL:0000197!1.07e-12!6;CL:0000098!1.07e-12!6;CL:0002167!1.07e-12!6;CL:0002615!4.88e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000197;7.51e-50;6!CL:0000098;7.51e-50;6!CL:0002167;7.51e-50;6!CL:0000710;1.29e-15;20!CL:0002615;2.74e-12;3!CL:0000075;8.94e-12;27!CL:0002077;1.51e-08;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,7.51e-50,6;CL:0000098,7.51e-50,6;CL:0002167,7.51e-50,6;CL:0000710,1.29e-15,20;CL:0002615,3.24e-12,3;CL:0000075,8.94e-12,27;CL:0002077,1.67e-09,34 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0003688;8.72e-07;6!UBERON:0002358;8.72e-07;6!UBERON:0003684;8.72e-07;6!UBERON:0001178;8.72e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!4.70e-14!3;UBERON:0009751!4.70e-14!3;UBERON:0000946!4.70e-14!3;UBERON:0002523!4.70e-14!3;UBERON:0005983!4.70e-14!3;UBERON:0002165!4.70e-14!3;UBERON:0002062!4.70e-14!3;UBERON:0007280!4.70e-14!3;UBERON:0002133!4.75e-10!2;UBERON:0003688!3.21e-07!6;UBERON:0002358!3.21e-07!6;UBERON:0003684!3.21e-07!6;UBERON:0001178!3.21e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0003688;8.72e-07;6!UBERON:0002358;8.72e-07;6!UBERON:0003684;8.72e-07;6!UBERON:0001178;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0001781,1.32e-09,4;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
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| ||
|short_description=p@chr3:177430474..177430476,+ | |short_description=p@chr3:177430474..177430476,+ | ||
}} | }} |
Latest revision as of 18:25, 29 July 2015
Short description: | p@chr3:177430474..177430476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:177430474..177430476, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 7.51e-50 | 6 |
sensory epithelial cell | 7.51e-50 | 6 |
olfactory epithelial cell | 7.51e-50 | 6 |
neurecto-epithelial cell | 1.29e-15 | 20 |
adipocyte of omentum tissue | 3.24e-12 | 3 |
columnar/cuboidal epithelial cell | 8.94e-12 | 27 |
ecto-epithelial cell | 1.67e-09 | 34 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
layer of retina | 1.32e-09 | 4 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |