FFCP PHASE1:Hg19::chr3:178213272..178213277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:178213272..178213277,+ | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_at_chr3:178213272..178213277,+ | |description=CAGE_peak_at_chr3:178213272..178213277,+ | ||
|id=chr3:178213272..178213277,+ | |id=chr3:178213272..178213277,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.32e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.32e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.10e-50;1!UBERON:0003056;8.70e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.18e-09!3;UBERON:0009751!1.18e-09!3;UBERON:0000946!1.18e-09!3;UBERON:0002523!1.18e-09!3;UBERON:0005983!1.18e-09!3;UBERON:0002165!1.18e-09!3;UBERON:0002062!1.18e-09!3;UBERON:0007280!1.18e-09!3;UBERON:0000941!4.57e-08!1;UBERON:0004904!4.57e-08!1;UBERON:0002464!4.57e-08!1;UBERON:0001021!4.57e-08!1;UBERON:0001785!4.57e-08!1;UBERON:0002134!5.96e-08!1;UBERON:0005208!5.96e-08!1;UBERON:0005946!5.96e-08!1;UBERON:0005965!5.96e-08!1;UBERON:0002078!5.96e-08!1;UBERON:0002146!8.84e-08!1;UBERON:0005623!8.84e-08!1;UBERON:0001301!1.01e-07!1 | |ontology_enrichment_uberon=UBERON:0003978!1.18e-09!3;UBERON:0009751!1.18e-09!3;UBERON:0000946!1.18e-09!3;UBERON:0002523!1.18e-09!3;UBERON:0005983!1.18e-09!3;UBERON:0002165!1.18e-09!3;UBERON:0002062!1.18e-09!3;UBERON:0007280!1.18e-09!3;UBERON:0000941!4.57e-08!1;UBERON:0004904!4.57e-08!1;UBERON:0002464!4.57e-08!1;UBERON:0001021!4.57e-08!1;UBERON:0001785!4.57e-08!1;UBERON:0002134!5.96e-08!1;UBERON:0005208!5.96e-08!1;UBERON:0005946!5.96e-08!1;UBERON:0005965!5.96e-08!1;UBERON:0002078!5.96e-08!1;UBERON:0002146!8.84e-08!1;UBERON:0005623!8.84e-08!1;UBERON:0001301!1.01e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.10e-50;1!UBERON:0001785;3.10e-50;1!UBERON:0002464;3.10e-50;1!UBERON:0004904;3.10e-50;1!UBERON:0001021;3.10e-50;1!UBERON:0006955;4.32e-26;2!UBERON:0004801;4.32e-26;2!UBERON:0003714;6.30e-26;2!UBERON:0005162;6.30e-26;2!UBERON:0000122;6.30e-26;2!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0000010;8.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0006955,4.32e-26,2;UBERON:0004801,4.32e-26,2;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000010,7.91e-07,8 | |||
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|short_description=p@chr3:178213272..178213277,+ | |short_description=p@chr3:178213272..178213277,+ | ||
}} | }} |
Latest revision as of 18:26, 29 July 2015
Short description: | p@chr3:178213272..178213277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:178213272..178213277, + |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.32e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
uterine epithelium | 4.32e-26 | 2 |
cervix epithelium | 4.32e-26 | 2 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
peripheral nervous system | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.66e-11 | 5 |