FFCP PHASE1:Hg19::chr3:53926081..53926105,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:53926081..53926105,+ | |||
|coexpression_cluster_id=C1312 | |||
|description=CAGE_peak_at_chr3:53926081..53926105,+ | |||
|id=chr3:53926081..53926105,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.91e-24!140;CL:0002087!1.31e-18!119;CL:0002031!1.88e-18!124;CL:0000988!2.33e-17!182;CL:0000037!5.50e-17!172;CL:0000566!5.50e-17!172;CL:0002032!3.97e-15!165;CL:0000837!3.97e-15!165;CL:0000860!1.82e-13!45;CL:0002057!3.60e-13!42;CL:0000766!3.69e-12!76;CL:0000542!1.28e-09!53;CL:0000051!1.28e-09!53;CL:0000838!1.34e-09!52;CL:0000839!1.58e-09!70;CL:0000557!2.01e-09!71;CL:0002194!1.57e-08!63;CL:0000576!1.57e-08!63;CL:0000040!1.57e-08!63;CL:0000559!1.57e-08!63;CL:0002009!1.68e-08!65;CL:0000791!3.16e-07!18;CL:0000789!3.16e-07!18;CL:0002420!3.16e-07!18;CL:0002419!3.16e-07!18;CL:0000790!3.16e-07!18;CL:0000763!6.06e-07!112;CL:0000049!6.06e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.84e-19;33!CL:0002057;4.84e-19;33!CL:0000624;3.77e-15;6!CL:0000791;1.22e-14;18!CL:0000789;1.22e-14;18!CL:0002419;1.22e-14;18!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0000094;1.05e-11;8!CL:0002087;1.53e-11;104!CL:0000081;4.57e-11;11!CL:0000576;3.45e-10;48!CL:0000084;8.38e-10;25!CL:0000766;1.93e-09;69!CL:0000542;2.05e-09;53!CL:0000767;8.42e-09;3!CL:0000623;1.04e-08;3!CL:0000898;1.29e-08;3!CL:0000738;1.70e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.30e-34,136;CL:0000988,3.12e-28,177;CL:0002087,1.26e-26,115;CL:0000037,1.49e-26,168;CL:0002031,8.02e-24,120;CL:0002032,2.94e-23,161;CL:0000837,2.94e-23,161;CL:0000860,6.47e-19,42;CL:0002057,6.47e-19,42;CL:0000766,3.08e-18,72;CL:0000473,7.78e-16,48;CL:0000234,7.78e-16,48;CL:0000624,1.77e-15,6;CL:0000791,5.45e-15,18;CL:0000789,5.45e-15,18;CL:0002420,5.45e-15,18;CL:0002419,5.45e-15,18;CL:0000790,5.45e-15,18;CL:0000838,6.24e-14,52;CL:0000542,1.45e-13,53;CL:0000051,1.45e-13,53;CL:0000094,7.74e-12,8;CL:0002194,1.45e-11,59;CL:0000576,1.45e-11,59;CL:0000040,1.45e-11,59;CL:0000559,1.45e-11,59;CL:0000081,3.41e-11,11;CL:0000839,4.65e-11,66;CL:0002009,5.09e-11,61;CL:0000557,8.17e-11,67;CL:0000763,1.13e-10,108;CL:0000049,1.13e-10,108;CL:0000084,4.84e-10,25;CL:0000827,4.84e-10,25;CL:0000767,7.52e-09,3;CL:0000623,1.13e-08,3;CL:0000825,1.13e-08,3;CL:0000898,1.44e-08,3;CL:0002320,3.15e-08,361;CL:0000134,3.88e-08,354;CL:0000219,9.21e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-14;18!CL:0002057;1.28e-14;42!CL:0000051;2.05e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.07e-10!102;UBERON:0003061!8.07e-10!102;UBERON:0002371!3.82e-09!80;UBERON:0001474!6.22e-09!86;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57;UBERON:0002193!2.14e-07!112;UBERON:0004765!3.34e-07!101;UBERON:0001434!3.34e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.81e-11,98;UBERON:0003061,7.81e-11,98;UBERON:0002371,7.00e-10,76;UBERON:0002193,3.33e-09,108;UBERON:0001474,9.25e-09,82;UBERON:0002405,5.14e-08,93;UBERON:0002384,1.21e-07,371;UBERON:0004765,1.64e-07,90 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.572471974262113,0.136874425072884,0,0.229240217243854,0.164201178899891,0.314843125254717,6.29382842958246,2.68680578668049,3.09632246632152,0.919421224478927,0,0.369754010166788,0.46480320348181,0,1.17440175733939,0,2.20598892217156,2.60413044859022,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0,0.619412741790207,1.43846196161075,3.07392847834921,1.6553756092201,2.06847408441971,1.29096936716765,1.35426486594342,0.376484679085209,0.272906150057846,0.449446968890169,1.22433556948361,3.85114832491312,1.27867425159808,0,1.39624560335142,0.426224750532694,1.16083695451434,1.13477044938228,0,1.25624332628372,1.5644487552606,1.52032191293582,1.81619850790011,4.78760926783834,2.21523671208619,0.633765858935825,0.637812899895131,0.419317291016752,1.34794357375794,0,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,1.75996244461323,1.09227722252426,0.889509253863555,0,0,2.29900975981793,1.32208974556972,0.954053754535364,2.27685187643779,0.587237189370939,1.91136614062614,0,1.68152568894461,0,4.91774425284583,1.96505381374582,2.87842098599313,1.00311897234407,2.60737813306872,1.89379122293893,1.94826728407911,2.33961959458865,2.06224135232386,1.32920336750173,1.62482318259009,1.15282187753108,0.780356085359269,0,0.276350017785848,0,5.6348894001583,2.67540828089713,1.04535523804977,0.679856056185397,4.21542542962113,3.09264700934367,1.51811815211702,0.95569624297229,0.651083453856419,1.90090408889675,0,0,0,0.473554504088034,1.64225599384209,2.01606743224732,3.20928234940209,2.31719046212478,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0,0.327447688744282,0.364295288292542,1.11235332835329,0,0,0,0.715471872916026,1.71598473234038,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,3.9534125230819,11.6334079244498,0,0,0,0.662045904066094,0.286836620748814,0,0,2.1349799145941,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0.570471821544449,0,0.352303495931295,0,0,0,0.122834317311768,0,0,0,0,0,0.841680569770331,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.772921620136887,0,0,0,0,0.460249493211497,0.161646056818812,1.06502877754984,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0.441463099414651,0.245976877086227,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,1.71697232418975,0,0.468008530278475,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0,0,0.492663237895943,0.264145302039678,2.69526550203004,0.576479813667846,0.25248486685276,0,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0,0.224262168690721,0,0.2933531432838,0,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.358121926479791,0.112085143993527,2.1673383622212,3.88129634747131,3.20857590699371,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,2.90090859405225,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,1.17480694477644,0,1.24060815673732,1.2942852049117,0.426910231213777,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.308419387605311,0,0.246381468041427,0,0,0.120859449591622,0,0,0.459257792658427,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,1.08378575017541,0,0,0,0,0.219259876645935,0,0,0,0,0,0.457847324091717,0.41254749960294,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.725083469571143,0.255679882248303,0,0.165284915360978,0.192190067365106,0.382838137483752,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0.294747123039363,0,1.41904425628239,0,0,0.379473173765715,0.699869440489966,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0.507447609232169,0,0,0,0,0,1.08006287447623,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.721346064882224,0,0.159426272728822,0.199579371432817,0,0,0,0.561594356226918,0,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0.121360521749513,0.334330152832435,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0.844016498463076,0.445234820091624,0,0.63337622438398,0.398495976502139,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0,0.709163045303809,0.344743373241465,0.29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| |||
|short_description=p@chr3:53926081..53926105,+ | |||
}} |
Latest revision as of 22:39, 29 July 2015
Short description: | p@chr3:53926081..53926105, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:53926081..53926105, + |
Coexpression cluster: | C1312_Eosinophils_Basophils_CD4_Natural_Mast_granulocyte_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.81e-11 | 98 |
blood island | 7.81e-11 | 98 |
bone marrow | 7.00e-10 | 76 |
hemolymphoid system | 3.33e-09 | 108 |
bone element | 9.25e-09 | 82 |
immune system | 5.14e-08 | 93 |
connective tissue | 1.21e-07 | 371 |
skeletal element | 1.64e-07 | 90 |