FFCP PHASE1:Hg19::chr4:11545590..11545602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:11545590..11545602,+ | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr4:11545590..11545602,+ | |description=CAGE_peak_at_chr4:11545590..11545602,+ | ||
|id=chr4:11545590..11545602,+ | |id=chr4:11545590..11545602,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.12e-34!24;CL:0000115!1.19e-29!35;CL:0000071!5.92e-29!18;CL:0002546!5.92e-29!18;CL:0002078!1.35e-25!44;CL:0000213!7.55e-16!57;CL:0000215!7.55e-16!57;CL:1000413!1.94e-15!9;CL:0000222!3.82e-12!119;CL:0000076!4.70e-12!62;CL:0002543!2.99e-11!6;CL:0002544!6.28e-11!6;CL:0000066!4.69e-09!254;CL:0000860!1.32e-07!45;CL:0002274!6.59e-07!5;CL:0000457!6.59e-07!5;CL:0002191!6.59e-07!5;CL:0000097!6.59e-07!5;CL:0000831!6.59e-07!5;CL:0002028!6.59e-07!5;CL:0005020!7.06e-07!6;CL:0002138!7.06e-07!6;CL:0005022!7.06e-07!6;CL:0002057!7.89e-07!42 | |ontology_enrichment_celltype=CL:0002139!6.12e-34!24;CL:0000115!1.19e-29!35;CL:0000071!5.92e-29!18;CL:0002546!5.92e-29!18;CL:0002078!1.35e-25!44;CL:0000213!7.55e-16!57;CL:0000215!7.55e-16!57;CL:1000413!1.94e-15!9;CL:0000222!3.82e-12!119;CL:0000076!4.70e-12!62;CL:0002543!2.99e-11!6;CL:0002544!6.28e-11!6;CL:0000066!4.69e-09!254;CL:0000860!1.32e-07!45;CL:0002274!6.59e-07!5;CL:0000457!6.59e-07!5;CL:0002191!6.59e-07!5;CL:0000097!6.59e-07!5;CL:0000831!6.59e-07!5;CL:0002028!6.59e-07!5;CL:0005020!7.06e-07!6;CL:0002138!7.06e-07!6;CL:0005022!7.06e-07!6;CL:0002057!7.89e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.90e-75;24!CL:0000071;3.10e-73;18!CL:0000115;5.42e-59;36!CL:1000413;2.49e-41;9!CL:0002078;5.33e-41;45!CL:0002543;2.80e-29;6!CL:0002544;2.47e-28;6!CL:0000213;2.40e-26;58!CL:0000215;2.40e-26;58!CL:0002618;1.25e-15;3!CL:0000076;1.66e-14;63!CL:0002545;2.42e-10;2!CL:0002262;2.79e-10;2!CL:1000398;2.79e-10;2!CL:0002138;8.31e-08;6!CL:0002548;3.06e-07;6!CL:0002144;4.01e-07;3!CL:0000239;6.52e-07;3!CL:1000615;6.52e-07;3!CL:0002306;6.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.02e-75,24;CL:0000071,3.41e-73,18;CL:0002546,3.41e-73,18;CL:0000115,1.26e-70,36;CL:0002078,3.21e-65,45;CL:0000213,1.18e-41,58;CL:0000215,1.18e-41,58;CL:1000413,2.55e-41,9;CL:0002543,2.87e-29,6;CL:0002544,2.42e-28,6;CL:0000222,3.96e-28,121;CL:0000076,6.73e-23,63;CL:0002618,1.25e-15,3;CL:0002321,6.79e-12,250;CL:0002545,2.42e-10,2;CL:0002262,2.92e-10,2;CL:1000398,2.92e-10,2;CL:0000066,5.47e-10,253;CL:0005020,8.22e-08,6;CL:0002138,8.22e-08,6;CL:0005022,8.22e-08,6;CL:0002548,3.03e-07,6;CL:0002144,4.13e-07,3;CL:0000239,6.33e-07,3;CL:1000615,6.33e-07,3;CL:0002306,6.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.10e-73;18!CL:0000222;1.18e-11;121!CL:0005022;8.31e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.92e-29!18;UBERON:0004638!5.92e-29!18;UBERON:0004852!5.92e-29!18;UBERON:0000487!6.92e-28!22;UBERON:0003914!1.08e-27!118;UBERON:0000055!1.94e-26!69;UBERON:0006914!1.13e-23!25;UBERON:0001981!2.55e-23!60;UBERON:0007500!2.55e-23!60;UBERON:0004537!2.55e-23!60;UBERON:0006965!2.55e-23!60;UBERON:0004872!6.08e-22!84;UBERON:0002049!2.07e-21!79;UBERON:0007798!2.07e-21!79;UBERON:0003081!5.99e-21!216;UBERON:0004535!5.71e-20!110;UBERON:0001009!4.85e-19!113;UBERON:0003915!1.94e-15!9;UBERON:0004700!1.94e-15!9;UBERON:0001917!1.94e-15!9;UBERON:0000926!5.45e-15!448;UBERON:0004120!5.45e-15!448;UBERON:0006603!5.45e-15!448;UBERON:0001637!1.56e-13!42;UBERON:0003509!1.56e-13!42;UBERON:0004572!1.56e-13!42;UBERON:0004111!3.17e-13!241;UBERON:0000025!4.16e-13!194;UBERON:0000477!2.67e-09!286;UBERON:0000490!5.96e-09!138;UBERON:0000947!2.15e-08!21;UBERON:0010191!2.15e-08!21;UBERON:0004573!3.18e-08!33;UBERON:0004571!3.18e-08!33;UBERON:0000467!4.39e-08!625;UBERON:0000480!5.07e-08!626;UBERON:0001638!4.48e-07!9;UBERON:0003920!4.48e-07!9;UBERON:0004582!4.48e-07!9;UBERON:0000923!5.96e-07!604;UBERON:0005291!5.96e-07!604;UBERON:0006598!5.96e-07!604;UBERON:0002532!5.96e-07!604;UBERON:0002050!6.83e-07!605;UBERON:0005423!6.83e-07!605;UBERON:0002405!7.76e-07!115 | |ontology_enrichment_uberon=UBERON:0001986!5.92e-29!18;UBERON:0004638!5.92e-29!18;UBERON:0004852!5.92e-29!18;UBERON:0000487!6.92e-28!22;UBERON:0003914!1.08e-27!118;UBERON:0000055!1.94e-26!69;UBERON:0006914!1.13e-23!25;UBERON:0001981!2.55e-23!60;UBERON:0007500!2.55e-23!60;UBERON:0004537!2.55e-23!60;UBERON:0006965!2.55e-23!60;UBERON:0004872!6.08e-22!84;UBERON:0002049!2.07e-21!79;UBERON:0007798!2.07e-21!79;UBERON:0003081!5.99e-21!216;UBERON:0004535!5.71e-20!110;UBERON:0001009!4.85e-19!113;UBERON:0003915!1.94e-15!9;UBERON:0004700!1.94e-15!9;UBERON:0001917!1.94e-15!9;UBERON:0000926!5.45e-15!448;UBERON:0004120!5.45e-15!448;UBERON:0006603!5.45e-15!448;UBERON:0001637!1.56e-13!42;UBERON:0003509!1.56e-13!42;UBERON:0004572!1.56e-13!42;UBERON:0004111!3.17e-13!241;UBERON:0000025!4.16e-13!194;UBERON:0000477!2.67e-09!286;UBERON:0000490!5.96e-09!138;UBERON:0000947!2.15e-08!21;UBERON:0010191!2.15e-08!21;UBERON:0004573!3.18e-08!33;UBERON:0004571!3.18e-08!33;UBERON:0000467!4.39e-08!625;UBERON:0000480!5.07e-08!626;UBERON:0001638!4.48e-07!9;UBERON:0003920!4.48e-07!9;UBERON:0004582!4.48e-07!9;UBERON:0000923!5.96e-07!604;UBERON:0005291!5.96e-07!604;UBERON:0006598!5.96e-07!604;UBERON:0002532!5.96e-07!604;UBERON:0002050!6.83e-07!605;UBERON:0005423!6.83e-07!605;UBERON:0002405!7.76e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.10e-73;18!UBERON:0001986;3.10e-73;18!UBERON:0004852;3.10e-73;18!UBERON:0000487;3.51e-59;22!UBERON:0006914;1.37e-51;25!UBERON:0003915;2.49e-41;9!UBERON:0004700;2.49e-41;9!UBERON:0001917;2.49e-41;9!UBERON:0000490;5.30e-35;33!UBERON:0007500;3.87e-23;56!UBERON:0001981;3.87e-23;56!UBERON:0004537;3.87e-23;56!UBERON:0000055;2.96e-21;65!UBERON:0001638;2.59e-19;9!UBERON:0003920;2.59e-19;9!UBERON:0004582;2.59e-19;9!UBERON:0003914;1.76e-14;74!UBERON:0000025;7.02e-14;93!UBERON:0002049;1.87e-13;75!UBERON:0007798;1.87e-13;75!UBERON:0004535;1.87e-12;109!UBERON:0001637;6.54e-12;42!UBERON:0003509;6.54e-12;42!UBERON:0004572;6.54e-12;42!UBERON:0003513;1.48e-10;7!UBERON:0000353;2.21e-10;15!UBERON:0005800;2.42e-10;2!UBERON:0001515;2.42e-10;2!UBERON:0001281;2.79e-10;2!UBERON:0003497;2.79e-10;2!UBERON:0003909;2.79e-10;2!UBERON:0003835;2.79e-10;2!UBERON:0002066;1.50e-09;5!UBERON:0001009;2.48e-09;112!UBERON:0000947;1.22e-07;21!UBERON:0010191;1.22e-07;21!UBERON:0004573;1.38e-07;33!UBERON:0004571;1.38e-07;33!UBERON:0010523;4.01e-07;3!UBERON:0001915;4.01e-07;3!UBERON:0001280;4.01e-07;3!UBERON:0004647;4.01e-07;3!UBERON:0001982;4.01e-07;3!UBERON:0006853;6.52e-07;3!UBERON:0007685;6.52e-07;3!UBERON:0004134;6.52e-07;3!UBERON:0000119;6.84e-07;139 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.41e-73,18;UBERON:0001986,3.41e-73,18;UBERON:0004852,3.41e-73,18;UBERON:0000487,3.79e-59,22;UBERON:0006914,1.46e-51,25;UBERON:0003915,2.55e-41,9;UBERON:0004700,2.55e-41,9;UBERON:0001917,2.55e-41,9;UBERON:0000055,1.37e-37,68;UBERON:0007500,1.92e-33,59;UBERON:0001981,1.92e-33,59;UBERON:0004537,1.92e-33,59;UBERON:0006965,1.92e-33,59;UBERON:0004872,4.90e-32,83;UBERON:0002049,5.21e-32,78;UBERON:0007798,5.21e-32,78;UBERON:0003914,2.77e-31,117;UBERON:0004535,1.30e-29,109;UBERON:0001009,1.22e-28,112;UBERON:0001638,2.63e-19,9;UBERON:0003920,2.63e-19,9;UBERON:0004582,2.63e-19,9;UBERON:0000025,3.19e-16,192;UBERON:0004111,3.40e-16,240;UBERON:0000490,2.52e-15,148;UBERON:0003081,6.72e-15,203;UBERON:0001637,2.17e-13,42;UBERON:0003509,2.17e-13,42;UBERON:0004572,2.17e-13,42;UBERON:0003513,1.86e-10,7;UBERON:0000353,2.23e-10,15;UBERON:0005800,2.42e-10,2;UBERON:0001515,2.42e-10,2;UBERON:0001281,2.92e-10,2;UBERON:0003497,2.92e-10,2;UBERON:0003909,2.92e-10,2;UBERON:0003835,2.92e-10,2;UBERON:0000483,4.32e-10,306;UBERON:0000119,6.37e-10,309;UBERON:0002066,1.50e-09,5;UBERON:0000926,5.91e-08,315;UBERON:0004120,5.91e-08,315;UBERON:0006603,5.91e-08,315;UBERON:0004573,7.95e-08,33;UBERON:0004571,7.95e-08,33;UBERON:0000947,1.21e-07,21;UBERON:0010191,1.21e-07,21;UBERON:0010523,4.13e-07,3;UBERON:0001915,4.13e-07,3;UBERON:0001280,4.13e-07,3;UBERON:0004647,4.13e-07,3;UBERON:0001982,4.13e-07,3;UBERON:0005171,4.13e-07,3;UBERON:0006853,6.33e-07,3;UBERON:0007685,6.33e-07,3;UBERON:0004134,6.33e-07,3 | |||
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|short_description=p@chr4:11545590..11545602,+ | |short_description=p@chr4:11545590..11545602,+ | ||
}} | }} |
Latest revision as of 01:08, 30 July 2015
Short description: | p@chr4:11545590..11545602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:11545590..11545602, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.02e-75 | 24 |
blood vessel endothelial cell | 3.41e-73 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.41e-73 | 18 |
endothelial cell | 1.26e-70 | 36 |
meso-epithelial cell | 3.21e-65 | 45 |
lining cell | 1.18e-41 | 58 |
barrier cell | 1.18e-41 | 58 |
endothelial cell of artery | 2.55e-41 | 9 |
vein endothelial cell | 2.87e-29 | 6 |
aortic endothelial cell | 2.42e-28 | 6 |
mesodermal cell | 3.96e-28 | 121 |
squamous epithelial cell | 6.73e-23 | 63 |
endothelial cell of umbilical vein | 1.25e-15 | 3 |
embryonic cell | 6.79e-12 | 250 |
thoracic aorta endothelial cell | 2.42e-10 | 2 |
endothelial cell of sinusoid | 2.92e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.92e-10 | 2 |
epithelial cell | 5.47e-10 | 253 |
lymphangioblast | 8.22e-08 | 6 |
endothelial cell of lymphatic vessel | 8.22e-08 | 6 |
vascular lymphangioblast | 8.22e-08 | 6 |
cardiac fibroblast | 3.03e-07 | 6 |
capillary endothelial cell | 4.13e-07 | 3 |
brush border epithelial cell | 6.33e-07 | 3 |
kidney cortex tubule cell | 6.33e-07 | 3 |
epithelial cell of proximal tubule | 6.33e-07 | 3 |