FFCP PHASE1:Hg19::chr4:151237545..151237563,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:151237545..151237563,- to FFCP PHASE1:Hg19::chr4:151237545..151237563,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:151237545..151237563,- | |||
|description=CAGE_peak_at_chr4:151237545..151237563,- | |||
|id=chr4:151237545..151237563,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.44e-09;2!CL:0000174;8.62e-07;3!CL:0002586;8.62e-07;3!CL:0002178;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.03e-09,2;CL:0000174,6.88e-07,3;CL:0002586,9.12e-07,3;CL:0002178,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;8.72e-18;1!UBERON:0003852;8.72e-18;1 | |||
|ontology_enrichment_disease=DOID:14566!7.69e-08!239;DOID:162!1.12e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:154;1.44e-09;2!DOID:4236;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.12e-09,2;DOID:4236,1.12e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;8.72e-18;1!UBERON:0008193;8.72e-18;1!UBERON:0010912;8.72e-18;1!UBERON:0002514;8.72e-18;1!UBERON:0003457;8.72e-18;1!UBERON:0008907;8.72e-18;1!UBERON:0008001;8.72e-18;1!UBERON:0007213;8.72e-18;1!UBERON:0009891;8.72e-18;1!UBERON:0007914;8.72e-18;1!UBERON:0007375;8.72e-18;1!UBERON:0003323;8.72e-18;1!UBERON:0010258;8.72e-18;1!UBERON:0005253;8.72e-18;1!UBERON:0007842;8.72e-18;1!UBERON:0002397;8.72e-18;1!UBERON:0003113;8.72e-18;1!UBERON:0003277;8.72e-18;1!UBERON:0001709;8.72e-18;1!UBERON:0002244;8.72e-18;1!UBERON:0005620;8.72e-18;1!UBERON:0010364;8.72e-18;1!UBERON:0004288;8.72e-18;1!UBERON:0004089;1.44e-09;2!UBERON:0002369;8.62e-07;3!UBERON:0001235;8.62e-07;3!UBERON:0001781;8.62e-07;3!UBERON:0006858;8.62e-07;3!UBERON:0001782;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.44e-17,1;UBERON:0008193,1.44e-17,1;UBERON:0010912,1.44e-17,1;UBERON:0002514,1.44e-17,1;UBERON:0003457,1.44e-17,1;UBERON:0008907,1.44e-17,1;UBERON:0008001,1.44e-17,1;UBERON:0007213,1.44e-17,1;UBERON:0009891,1.44e-17,1;UBERON:0007914,1.44e-17,1;UBERON:0009292,1.44e-17,1;UBERON:0003099,1.44e-17,1;UBERON:0007375,1.44e-17,1;UBERON:0003323,1.44e-17,1;UBERON:0010258,1.44e-17,1;UBERON:0007842,1.44e-17,1;UBERON:0009494,1.44e-17,1;UBERON:0010042,1.44e-17,1;UBERON:0010045,1.44e-17,1;UBERON:0010259,1.44e-17,1;UBERON:0010359,1.44e-17,1;UBERON:0009526,1.44e-17,1;UBERON:0002397,1.44e-17,1;UBERON:0003113,1.44e-17,1;UBERON:0003277,1.44e-17,1;UBERON:0001709,1.44e-17,1;UBERON:0004066,1.44e-17,1;UBERON:0002244,1.44e-17,1;UBERON:0005620,1.44e-17,1;UBERON:0004362,1.44e-17,1;UBERON:0010364,1.44e-17,1;UBERON:0010046,1.44e-17,1;UBERON:0005868,1.44e-17,1;UBERON:0007238,1.44e-17,1;UBERON:0004288,1.44e-17,1;UBERON:0004068,1.44e-17,1;UBERON:0010334,1.44e-17,1;UBERON:0003852,1.44e-17,1;UBERON:0010253,1.44e-17,1;UBERON:0005253,1.86e-09,2;UBERON:0004089,1.86e-09,2;UBERON:0002369,6.88e-07,3;UBERON:0001235,6.88e-07,3;UBERON:0006858,6.88e-07,3;UBERON:0001782,9.12e-07,3;UBERON:0005424,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0.506328996723799,0.389748020644795,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0,0,0,0,0,0,1.35339005608971,0,0,0,0,0,0,0.623224249527161,0,0,0,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,1.56262495439963,0,0,0,0,0,0,1.41620002574687,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.277349346026277,0,0,0,0,0,0,0.0730893170861856,0,0,0.176512253383001,0,0,0,0,0,0.0801588202515337,0,0,1.15272333723285,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0.866851769704557,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0.701139929541673,0,0.189403005275089,0,0,0.915360273587694,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.71553273099941,0.521988583930423,0,0,0,0,0,0.219284049578707,0,0,0.675769762612291,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.533458648470704,0.172214979660816,0,0,0,0,3.58104239650225,0,0.786329709279482,0,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39086617842064,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0.509781344063451,0,0,0,0,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0.506328996723799,0.389748020644795,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0,0,0,0,0,0,1.35339005608971,0,0,0,0,0,0,0.623224249527161,0,0,0,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,1.56262495439963,0,0,0,0,0,0,1.41620002574687,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.277349346026277,0,0,0,0,0,0,0.0730893170861856,0,0,0.176512253383001,0,0,0,0,0,0.0801588202515337,0,0,1.15272333723285,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0.866851769704557,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0.701139929541673,0,0.189403005275089,0,0,0.915360273587694,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.71553273099941,0.521988583930423,0,0,0,0,0,0.219284049578707,0,0,0.675769762612291,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.533458648470704,0.172214979660816,0,0,0,0,3.58104239650225,0,0.786329709279482,0,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39086617842064,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0.509781344063451,0,0,0,0,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:151237545..151237563,- | |||
}} | }} |
Latest revision as of 02:12, 30 July 2015
Short description: | p@chr4:151237545..151237563, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:151237545..151237563, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.03e-09 | 2 |
steroid hormone secreting cell | 6.88e-07 | 3 |
retinal pigment epithelial cell | 9.12e-07 | 3 |
epithelial cell of stomach | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.12e-09 | 2 |
carcinosarcoma | 1.12e-09 | 2 |