FFCP PHASE1:Hg19::chr4:2802687..2802711,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:2802687..2802711,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr4:2802687..2802711,- | |description=CAGE_peak_at_chr4:2802687..2802711,- | ||
|id=chr4:2802687..2802711,- | |id=chr4:2802687..2802711,- | ||
|ontology_enrichment_celltype=CL:0000766!2.09e-51!76;CL:0002057!1.77e-46!42;CL:0000557!8.89e-45!71;CL:0000860!3.84e-42!45;CL:0002009!1.38e-40!65;CL:0000839!1.52e-40!70;CL:0002194!4.21e-39!63;CL:0000576!4.21e-39!63;CL:0000040!4.21e-39!63;CL:0000559!4.21e-39!63;CL:0000763!1.73e-38!112;CL:0000049!1.73e-38!112;CL:0000738!2.12e-33!140;CL:0000988!5.08e-29!182;CL:0000037!9.82e-29!172;CL:0000566!9.82e-29!172;CL:0002032!4.32e-27!165;CL:0000837!4.32e-27!165;CL:0002031!1.62e-25!124;CL:0002087!3.11e-24!119;CL:0002393!2.12e-11!9;CL:0002397!2.12e-11!9;CL:0000094!1.78e-10!8;CL:0002320!6.47e-10!365;CL:0000134!4.55e-09!358;CL:0000219!7.71e-09!390;CL:0000081!2.08e-08!11 | |ontology_enrichment_celltype=CL:0000766!2.09e-51!76;CL:0002057!1.77e-46!42;CL:0000557!8.89e-45!71;CL:0000860!3.84e-42!45;CL:0002009!1.38e-40!65;CL:0000839!1.52e-40!70;CL:0002194!4.21e-39!63;CL:0000576!4.21e-39!63;CL:0000040!4.21e-39!63;CL:0000559!4.21e-39!63;CL:0000763!1.73e-38!112;CL:0000049!1.73e-38!112;CL:0000738!2.12e-33!140;CL:0000988!5.08e-29!182;CL:0000037!9.82e-29!172;CL:0000566!9.82e-29!172;CL:0002032!4.32e-27!165;CL:0000837!4.32e-27!165;CL:0002031!1.62e-25!124;CL:0002087!3.11e-24!119;CL:0002393!2.12e-11!9;CL:0002397!2.12e-11!9;CL:0000094!1.78e-10!8;CL:0002320!6.47e-10!365;CL:0000134!4.55e-09!358;CL:0000219!7.71e-09!390;CL:0000081!2.08e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.11e-68;33!CL:0002057;3.11e-68;33!CL:0000576;3.46e-51;48!CL:0000473;2.74e-50;39!CL:0000234;2.74e-50;39!CL:0000766;2.71e-39;69!CL:0000094;1.95e-20;8!CL:0000763;5.29e-18;100!CL:0002393;2.58e-16;6!CL:0002397;2.58e-16;6!CL:0002087;1.33e-14;104!CL:0000081;2.11e-14;11!CL:0000738;3.69e-11;136!CL:0000775;3.42e-09;3!CL:0000988;1.79e-08;177!CL:0000767;6.35e-08;3!CL:0000875;9.75e-08;3!CL:0002396;9.75e-08;3!CL:0000226;1.01e-07;3!CL:0000842;1.01e-07;3!CL:0000128;1.70e-07;7!CL:0000126;1.70e-07;7!CL:0000127;1.70e-07;7!CL:0002603;4.46e-07;3!CL:0000771;9.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.42e-97,42;CL:0002057,6.42e-97,42;CL:0000473,2.89e-87,48;CL:0000234,2.89e-87,48;CL:0000766,6.38e-82,72;CL:0002194,3.14e-67,59;CL:0000576,3.14e-67,59;CL:0000040,3.14e-67,59;CL:0000559,3.14e-67,59;CL:0002009,1.20e-64,61;CL:0000557,1.81e-63,67;CL:0000839,9.94e-62,66;CL:0000763,2.98e-54,108;CL:0000049,2.98e-54,108;CL:0000738,1.92e-47,136;CL:0002087,6.66e-39,115;CL:0000037,1.75e-38,168;CL:0000988,3.43e-37,177;CL:0002032,6.29e-36,161;CL:0000837,6.29e-36,161;CL:0002031,4.05e-33,120;CL:0002393,2.63e-22,9;CL:0002397,2.63e-22,9;CL:0000094,2.36e-20,8;CL:0000219,5.67e-15,386;CL:0002320,2.39e-14,361;CL:0000081,2.41e-14,11;CL:0000134,3.19e-14,354;CL:0000048,1.20e-09,427;CL:0000723,2.69e-09,433;CL:0000775,3.43e-09,3;CL:0000034,7.65e-09,441;CL:0000767,7.61e-08,3;CL:0000226,8.17e-08,3;CL:0000842,8.17e-08,3;CL:0000875,9.88e-08,3;CL:0002396,9.88e-08,3;CL:0000128,1.42e-07,7;CL:0000126,1.42e-07,7;CL:0000127,1.42e-07,7;CL:0002453,1.42e-07,7;CL:0002603,4.31e-07,3;CL:0000771,9.95e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.97e-69;42!CL:0000049;5.08e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.82e-47!102;UBERON:0003061!8.82e-47!102;UBERON:0002193!2.28e-41!112;UBERON:0002371!5.26e-40!80;UBERON:0001474!7.52e-37!86;UBERON:0004765!2.56e-31!101;UBERON:0001434!2.56e-31!101;UBERON:0002405!7.67e-29!115;UBERON:0002204!5.76e-15!167;UBERON:0002616!5.11e-14!59;UBERON:0001049!7.68e-14!57;UBERON:0005068!7.68e-14!57;UBERON:0006241!7.68e-14!57;UBERON:0007135!7.68e-14!57;UBERON:0003081!9.66e-14!216;UBERON:0002020!7.30e-13!34;UBERON:0003528!7.30e-13!34;UBERON:0001893!2.10e-12!34;UBERON:0002791!4.65e-12!33;UBERON:0001869!2.25e-11!32;UBERON:0000955!9.41e-11!69;UBERON:0006238!9.41e-11!69;UBERON:0001017!1.75e-10!82;UBERON:0005743!4.68e-10!86;UBERON:0002780!5.28e-10!41;UBERON:0001890!5.28e-10!41;UBERON:0006240!5.28e-10!41;UBERON:0007023!1.20e-09!115;UBERON:0000178!1.29e-09!15;UBERON:0000179!1.29e-09!15;UBERON:0000463!1.29e-09!15;UBERON:0003080!1.37e-09!42;UBERON:0003075!1.72e-09!86;UBERON:0007284!1.72e-09!86;UBERON:0002384!7.24e-09!375;UBERON:0002346!1.46e-08!90;UBERON:0000956!1.52e-08!25;UBERON:0000203!1.52e-08!25;UBERON:0000073!5.07e-08!94;UBERON:0001016!5.07e-08!94;UBERON:0000479!3.00e-07!787;UBERON:0003056!3.75e-07!61 | |ontology_enrichment_uberon=UBERON:0002390!8.82e-47!102;UBERON:0003061!8.82e-47!102;UBERON:0002193!2.28e-41!112;UBERON:0002371!5.26e-40!80;UBERON:0001474!7.52e-37!86;UBERON:0004765!2.56e-31!101;UBERON:0001434!2.56e-31!101;UBERON:0002405!7.67e-29!115;UBERON:0002204!5.76e-15!167;UBERON:0002616!5.11e-14!59;UBERON:0001049!7.68e-14!57;UBERON:0005068!7.68e-14!57;UBERON:0006241!7.68e-14!57;UBERON:0007135!7.68e-14!57;UBERON:0003081!9.66e-14!216;UBERON:0002020!7.30e-13!34;UBERON:0003528!7.30e-13!34;UBERON:0001893!2.10e-12!34;UBERON:0002791!4.65e-12!33;UBERON:0001869!2.25e-11!32;UBERON:0000955!9.41e-11!69;UBERON:0006238!9.41e-11!69;UBERON:0001017!1.75e-10!82;UBERON:0005743!4.68e-10!86;UBERON:0002780!5.28e-10!41;UBERON:0001890!5.28e-10!41;UBERON:0006240!5.28e-10!41;UBERON:0007023!1.20e-09!115;UBERON:0000178!1.29e-09!15;UBERON:0000179!1.29e-09!15;UBERON:0000463!1.29e-09!15;UBERON:0003080!1.37e-09!42;UBERON:0003075!1.72e-09!86;UBERON:0007284!1.72e-09!86;UBERON:0002384!7.24e-09!375;UBERON:0002346!1.46e-08!90;UBERON:0000956!1.52e-08!25;UBERON:0000203!1.52e-08!25;UBERON:0000073!5.07e-08!94;UBERON:0001016!5.07e-08!94;UBERON:0000479!3.00e-07!787;UBERON:0003056!3.75e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.23e-17;15!UBERON:0000179;2.23e-17;15!UBERON:0000463;2.23e-17;15!UBERON:0002390;4.32e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-65,98;UBERON:0003061,1.33e-65,98;UBERON:0002193,3.68e-58,108;UBERON:0002371,1.67e-54,76;UBERON:0001474,1.30e-49,82;UBERON:0004765,4.25e-44,90;UBERON:0002405,2.83e-42,93;UBERON:0001434,1.92e-38,100;UBERON:0003081,2.96e-26,203;UBERON:0002204,3.67e-19,167;UBERON:0000178,1.84e-17,15;UBERON:0000179,1.84e-17,15;UBERON:0000463,1.84e-17,15;UBERON:0002384,1.61e-13,371;UBERON:0000926,4.93e-13,315;UBERON:0004120,4.93e-13,315;UBERON:0006603,4.93e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,1.60057375499824,2.44800829493104,1.25381888591235,1.71741592278634,1.36874425072884,0.753255837568817,0.152826811495903,0.328402357799783,0.157421562627358,7.08055698328027,2.30297638858328,11.3015770020735,0,0,0,0,0,0.293600439334847,24.9297933839345,62.1687787157439,23.8711957787437,0.223915474239924,0,0.257575567634187,5.96132778996215,8.31327076115381,14.3124596100812,13.248455103624,14.3908760807639,11.4591357231188,11.507695692886,8.19714260893122,10.8781825748749,10.6871161028352,7.74581620300591,17.6054432572644,9.97684399575805,12.0078706025452,11.6856211911444,10.1007684482398,9.9487998393589,8.31138263538754,3.29851300186716,2.99195486432448,2.98357325372886,9.28669563611469,14.1846306172785,16.8162007228805,9.04495194924276,9.38669253156363,9.1219314776149,9.6863920421339,11.4166067156145,11.076183560431,13.5203383239643,25.0873073958751,11.3215668574523,7.30136102452218,3.15371474967163,4.98249318760948,5.98526761856622,8.15558376516269,4.20127553658658,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,2.49861453104692,1.4206635122641,0,0,0,0.144824403882799,0,2.68280343881454,0,0,0,0,0,0.486634870302636,0.661743720148475,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,42.6558290563158,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,2.34004265139238,0.891786973732369,0,0,0,0,0,0,1.47798971368783,0.176096868026452,0.829312462163088,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0,0,10.7296933755565,0,0,0,0.514414748524284,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0,0.641715181398742,0.508189248444927,0,0,0,0,26.9642528620986,35.899375104483,35.639734155499,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,1.71571711905428,1.86091223510599,11.4328526433867,5.01619521676188,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0.307007349452259,0,0,0.580066775656914,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,10.1489521846434,12.234195314278,6.83576624608995,5.00286728461357,9.87269455406866,8.43015304550532,5.40031437238115,7.9312517629427,0,0,0,0,0,0,0,0.199579371432817,0,2.96343015813436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781552381608161,0.835218521685727,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0.844175070377856,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0.821432273351958,1.27746588066972,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0.157566364614447,0.412079291905832,0.202210631562555,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0.449947783103001,0.77380195455795,0.242998226632099,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,1.05786081394152,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,1.001527445652,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,1.11743701340006,0.41023272848151,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.826747186004736,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0.135939465953663,0.460409414939944,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,1.18818560130834,0,0,0.657887425858975,0.386747327841463,0,0,0,0,0,0,0.716697915757256,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394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| ||
|short_description=p@chr4:2802687..2802711,- | |short_description=p@chr4:2802687..2802711,- | ||
}} | }} |
Latest revision as of 04:41, 30 July 2015
Short description: | p@chr4:2802687..2802711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:2802687..2802711, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-65 | 98 |
blood island | 1.33e-65 | 98 |
hemolymphoid system | 3.68e-58 | 108 |
bone marrow | 1.67e-54 | 76 |
bone element | 1.30e-49 | 82 |
skeletal element | 4.25e-44 | 90 |
immune system | 2.83e-42 | 93 |
skeletal system | 1.92e-38 | 100 |
lateral plate mesoderm | 2.96e-26 | 203 |
musculoskeletal system | 3.67e-19 | 167 |
blood | 1.84e-17 | 15 |
haemolymphatic fluid | 1.84e-17 | 15 |
organism substance | 1.84e-17 | 15 |
connective tissue | 1.61e-13 | 371 |
mesoderm | 4.93e-13 | 315 |
mesoderm-derived structure | 4.93e-13 | 315 |
presumptive mesoderm | 4.93e-13 | 315 |