FFCP PHASE1:Hg19::chr4:77916080..77916084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:77916080..77916084,+ | |||
|description=CAGE_peak_at_chr4:77916080..77916084,+ | |description=CAGE_peak_at_chr4:77916080..77916084,+ | ||
|id=chr4:77916080..77916084,+ | |id=chr4:77916080..77916084,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,8.69e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;4.05e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,4.09e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002616!3.32e-13!59;UBERON:0000955!6.40e-13!69;UBERON:0006238!6.40e-13!69;UBERON:0002020!2.79e-12!34;UBERON:0003528!2.79e-12!34;UBERON:0002791!8.19e-12!33;UBERON:0001893!8.30e-12!34;UBERON:0001049!8.37e-12!57;UBERON:0005068!8.37e-12!57;UBERON:0006241!8.37e-12!57;UBERON:0007135!8.37e-12!57;UBERON:0003080!1.02e-11!42;UBERON:0001017!1.16e-11!82;UBERON:0001869!2.58e-11!32;UBERON:0002780!3.54e-11!41;UBERON:0001890!3.54e-11!41;UBERON:0006240!3.54e-11!41;UBERON:0000073!3.73e-11!94;UBERON:0001016!3.73e-11!94;UBERON:0005743!9.52e-11!86;UBERON:0000153!4.16e-10!129;UBERON:0007811!4.16e-10!129;UBERON:0000033!1.39e-09!123;UBERON:0000956!1.56e-09!25;UBERON:0000203!1.56e-09!25;UBERON:0002346!6.81e-09!90;UBERON:0000924!6.83e-09!173;UBERON:0006601!6.83e-09!173;UBERON:0001950!4.61e-08!20;UBERON:0002619!5.34e-08!22;UBERON:0004121!6.81e-08!169;UBERON:0003075!1.08e-07!86;UBERON:0007284!1.08e-07!86;UBERON:0003056!2.68e-07!61 | |ontology_enrichment_uberon=UBERON:0002616!3.32e-13!59;UBERON:0000955!6.40e-13!69;UBERON:0006238!6.40e-13!69;UBERON:0002020!2.79e-12!34;UBERON:0003528!2.79e-12!34;UBERON:0002791!8.19e-12!33;UBERON:0001893!8.30e-12!34;UBERON:0001049!8.37e-12!57;UBERON:0005068!8.37e-12!57;UBERON:0006241!8.37e-12!57;UBERON:0007135!8.37e-12!57;UBERON:0003080!1.02e-11!42;UBERON:0001017!1.16e-11!82;UBERON:0001869!2.58e-11!32;UBERON:0002780!3.54e-11!41;UBERON:0001890!3.54e-11!41;UBERON:0006240!3.54e-11!41;UBERON:0000073!3.73e-11!94;UBERON:0001016!3.73e-11!94;UBERON:0005743!9.52e-11!86;UBERON:0000153!4.16e-10!129;UBERON:0007811!4.16e-10!129;UBERON:0000033!1.39e-09!123;UBERON:0000956!1.56e-09!25;UBERON:0000203!1.56e-09!25;UBERON:0002346!6.81e-09!90;UBERON:0000924!6.83e-09!173;UBERON:0006601!6.83e-09!173;UBERON:0001950!4.61e-08!20;UBERON:0002619!5.34e-08!22;UBERON:0004121!6.81e-08!169;UBERON:0003075!1.08e-07!86;UBERON:0007284!1.08e-07!86;UBERON:0003056!2.68e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.44e-12;32!UBERON:0001869;4.54e-12;32!UBERON:0000956;1.17e-11;25!UBERON:0000203;1.17e-11;25!UBERON:0003528;7.65e-11;34!UBERON:0002020;7.65e-11;34!UBERON:0002619;1.33e-10;22!UBERON:0001893;5.74e-10;34!UBERON:0002780;5.90e-10;41!UBERON:0001890;5.90e-10;41!UBERON:0001871;8.21e-10;6!UBERON:0001950;4.76e-09;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,4.79e-13,32;UBERON:0001869,4.79e-13,32;UBERON:0003528,3.56e-12,34;UBERON:0002020,3.56e-12,34;UBERON:0001893,3.56e-12,34;UBERON:0002780,1.18e-11,41;UBERON:0001890,1.18e-11,41;UBERON:0003080,1.18e-11,41;UBERON:0006240,1.18e-11,41;UBERON:0000956,1.80e-11,25;UBERON:0000203,1.80e-11,25;UBERON:0002619,1.91e-10,22;UBERON:0001871,1.32e-09,6;UBERON:0001950,5.70e-09,20;UBERON:0000955,1.43e-08,68;UBERON:0006238,1.43e-08,68;UBERON:0000073,1.58e-08,53;UBERON:0002616,1.58e-08,53;UBERON:0003056,1.87e-08,61;UBERON:0001049,5.90e-08,56;UBERON:0005068,5.90e-08,56;UBERON:0006241,5.90e-08,56;UBERON:0007135,5.90e-08,56;UBERON:0002346,2.57e-07,86;UBERON:0001016,6.49e-07,89;UBERON:0001017,8.74e-07,81 | |||
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| ||
|short_description=p@chr4:77916080..77916084,+ | |short_description=p@chr4:77916080..77916084,+ | ||
}} | }} |
Latest revision as of 07:02, 30 July 2015
Short description: | p@chr4:77916080..77916084, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:77916080..77916084, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 8.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of telencephalon | 4.79e-13 | 32 |
cerebral hemisphere | 4.79e-13 | 32 |
brain grey matter | 3.56e-12 | 34 |
gray matter | 3.56e-12 | 34 |
telencephalon | 3.56e-12 | 34 |
regional part of forebrain | 1.18e-11 | 41 |
forebrain | 1.18e-11 | 41 |
anterior neural tube | 1.18e-11 | 41 |
future forebrain | 1.18e-11 | 41 |
cerebral cortex | 1.80e-11 | 25 |
pallium | 1.80e-11 | 25 |
regional part of cerebral cortex | 1.91e-10 | 22 |
temporal lobe | 1.32e-09 | 6 |
neocortex | 5.70e-09 | 20 |
brain | 1.43e-08 | 68 |
future brain | 1.43e-08 | 68 |
regional part of nervous system | 1.58e-08 | 53 |
regional part of brain | 1.58e-08 | 53 |
pre-chordal neural plate | 1.87e-08 | 61 |
neural tube | 5.90e-08 | 56 |
neural rod | 5.90e-08 | 56 |
future spinal cord | 5.90e-08 | 56 |
neural keel | 5.90e-08 | 56 |
neurectoderm | 2.57e-07 | 86 |
nervous system | 6.49e-07 | 89 |
central nervous system | 8.74e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 4.09e-07 | 3 |