FFCP PHASE1:Hg19::chr5:140887589..140887627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:140887589..140887627,+ | |||
|coexpression_cluster_id=C4468 | |||
|description=CAGE_peak_at_chr5:140887589..140887627,+ | |description=CAGE_peak_at_chr5:140887589..140887627,+ | ||
|id=chr5:140887589..140887627,+ | |id=chr5:140887589..140887627,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.13e-35!180;CL:0000680!4.97e-19!57;CL:0000056!4.97e-19!57;CL:0000355!4.97e-19!57;CL:0000187!9.39e-18!54;CL:0000183!1.48e-17!59;CL:0000057!7.07e-17!75;CL:0000192!2.16e-16!42;CL:0000514!2.16e-16!42;CL:0000393!1.68e-14!60;CL:0000211!1.68e-14!60;CL:0000359!8.04e-14!32 | |ontology_enrichment_celltype=CL:0000055!1.13e-35!180;CL:0000680!4.97e-19!57;CL:0000056!4.97e-19!57;CL:0000355!4.97e-19!57;CL:0000187!9.39e-18!54;CL:0000183!1.48e-17!59;CL:0000057!7.07e-17!75;CL:0000192!2.16e-16!42;CL:0000514!2.16e-16!42;CL:0000393!1.68e-14!60;CL:0000211!1.68e-14!60;CL:0000359!8.04e-14!32 | ||
|ontology_enrichment_celltype_v019=CL:0000327;5.89e-11;15!CL:0000499;1.16e-10;28!CL:0000359;4.73e-10;32!CL:0000192;4.96e-08;43!CL:0000153;1.09e-07;9!CL:0000447;1.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.89e-12,58;CL:0000056,3.89e-12,58;CL:0000355,3.89e-12,58;CL:0000057,1.26e-11,76;CL:0000192,1.58e-11,43;CL:0000514,1.58e-11,43;CL:0000327,7.67e-11,15;CL:0000499,9.33e-11,28;CL:0000359,1.11e-10,32;CL:0000187,1.63e-10,55;CL:0000048,2.62e-09,427;CL:0000723,8.51e-09,433;CL:0000393,1.07e-08,61;CL:0000211,1.07e-08,61;CL:0000034,3.81e-08,441;CL:0000153,8.64e-08,9;CL:0000447,8.64e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000514;4.96e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.17e-22!83;UBERON:0002329!1.17e-22!83;UBERON:0003077!1.17e-22!83;UBERON:0003059!1.17e-22!83;UBERON:0007282!1.17e-22!83;UBERON:0009618!1.17e-22!83;UBERON:0007285!1.17e-22!83;UBERON:0004290!7.53e-20!70;UBERON:0002385!3.33e-18!63;UBERON:0001015!3.33e-18!63;UBERON:0000383!3.33e-18!63;UBERON:0001134!4.18e-17!61;UBERON:0002036!4.18e-17!61;UBERON:0003082!4.18e-17!61;UBERON:0000486!5.79e-16!82;UBERON:0005256!1.57e-14!143;UBERON:0002100!1.92e-08!216;UBERON:0001637!2.03e-08!42;UBERON:0003509!2.03e-08!42;UBERON:0004572!2.03e-08!42;UBERON:0000475!6.06e-08!365;UBERON:0004573!7.79e-08!33;UBERON:0004571!7.79e-08!33;UBERON:0001135!1.02e-07!15;UBERON:0003102!1.58e-07!95;UBERON:0004872!3.25e-07!84;UBERON:0002049!3.48e-07!79;UBERON:0007798!3.48e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.19e-08;8!UBERON:0000982;3.19e-08;8!UBERON:0004770;3.19e-08;8!UBERON:0011135;6.17e-07;5!UBERON:0002216;6.17e-07;5!UBERON:0011134;6.17e-07;5!UBERON:0002209;6.17e-07;5!UBERON:0002213;6.17e-07;5!UBERON:0007844;6.17e-07;5!UBERON:0011138;6.17e-07;5!UBERON:0001130;6.17e-07;5!UBERON:0001066;6.17e-07;5!UBERON:0001468;6.17e-07;5!UBERON:0001013;6.58e-07;14!UBERON:0004573;7.99e-07;33!UBERON:0004571;7.99e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.04e-13,73;UBERON:0002329,8.14e-13,71;UBERON:0003059,8.14e-13,71;UBERON:0007282,8.14e-13,71;UBERON:0004290,8.14e-13,71;UBERON:0009618,8.14e-13,71;UBERON:0003077,1.72e-12,72;UBERON:0007285,1.72e-12,72;UBERON:0002385,4.33e-12,64;UBERON:0001015,4.33e-12,64;UBERON:0000383,4.33e-12,64;UBERON:0000486,2.32e-11,83;UBERON:0001134,9.07e-11,62;UBERON:0002036,9.07e-11,62;UBERON:0003082,9.07e-11,62;UBERON:0007503,9.97e-11,78;UBERON:0005256,9.46e-10,122;UBERON:0003104,2.82e-09,160;UBERON:0009142,2.82e-09,160;UBERON:0004905,2.81e-08,8;UBERON:0000982,2.81e-08,8;UBERON:0004770,2.81e-08,8;UBERON:0002204,8.11e-08,167;UBERON:0001637,1.48e-07,42;UBERON:0003509,1.48e-07,42;UBERON:0004572,1.48e-07,42;UBERON:0004573,1.79e-07,33;UBERON:0004571,1.79e-07,33;UBERON:0011135,5.29e-07,5;UBERON:0002216,5.29e-07,5;UBERON:0011134,5.29e-07,5;UBERON:0002209,5.29e-07,5;UBERON:0002213,5.29e-07,5;UBERON:0005856,5.29e-07,5;UBERON:0005866,5.29e-07,5;UBERON:0005863,5.29e-07,5;UBERON:0007844,5.29e-07,5;UBERON:0011138,5.29e-07,5;UBERON:0001130,5.29e-07,5;UBERON:0001066,5.29e-07,5;UBERON:0001468,5.29e-07,5;UBERON:0001013,7.78e-07,14 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.563817616383885,0,0.446961094427288,0,0,1.26343974685366,1.56711376919903,0.245733936501509,0,0,0,4.82688776544182,2.65117900582333,0.672325146451775,1.80808358407193,0.730310090387373,1.46379839637152,0.246242116153576,0,0.626909442956176,0,0,0.125542639594803,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,2.89151321907653,6.51739283826656,4.77993512570718,3.1811437882044,3.89307896242109,0.0945348171640679,0.443458794925128,0.175669571386252,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,0.529636723252875,1.14734648299525,1.06400514659507,0.560677600142307,0,0.98667019366864,1.55605517699883,0.269421344139376,0.163461903113459,0.605429710579726,0,2.34321431833797,4.05808099879417,2.2818872861778,2.69007624993242,0.587172493218824,0.647491777472526,0.421352420106746,1.63323337003915,0.245668634623536,2.58314452939414,2.37600571456411,2.47266929278557,3.64064544775211,2.87447256726495,0.505008341862199,0.625592599359821,1.93944880838928,1.31693286264251,1.22595118319608,2.55404700141215,0.453728732640084,0,1.92201649936711,2.7551147150743,0.300091096084402,2.47326070172253,0.515281080091258,1.48893485065272,0.168776332241266,0.389748020644795,0.252433774244115,4.32634523618807,12.2851003182297,0,0.403008392910561,1.01736355386293,0,0,0,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,2.3218396401599,9.38443326170461,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,4.41026134156626,0,0,0.590789906681404,0,0,0.343135620597051,0.329250856225877,0,0,0,1.95484983186195,2.07986957055916,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0,0.253991577168676,1.14596527667483,0,1.71072446022705,0.205654985406647,0.300343057843917,0.285826432630578,1.68196626518041,0,1.0267360014933,0.387815147273333,17.8828222925941,3.381211010224,0.26593811658487,0,1.28603687131071,0,1.3321108950805,0.57191197463259,2.17048642156577,0,1.30294473717494,0.355391948742546,0,0.904318131178758,2.61460037580088,0.199945982364114,0,0,0,3.59437283237374,2.29723871668228,1.42636905040718,1.01346914667305,2.26023954805422,1.25342674267927,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.08575535922538,7.50255781589516,1.62759014219841,0.207970861530807,1.42743191037729,0.788512075169673,1.63997980989798,3.00946099727719,2.27407504055985,0,0,0.921845842708516,1.82455590382974,6.06983588134496,1.02943027143257,0,0,0,0,0,0.604780586659361,1.48864684691266,0.153461973288062,0,0.896974044789907,1.53512174720011,0.64341568457443,2.96836132889982,0.462629081407967,1.59805552781814,0.821271560138091,2.07701771673448,0.697262270759755,0,0,0,1.26295892981067,0.728364672026868,1.70461739447251,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.9273691048295,0.183138929636687,0.247528499761764,0.574265537996172,0,0,1.06337790121334,0.308097234229289,0.307007349452259,0.275673144969061,1.07420244868274,0.435050081742686,0.596586391912706,0.534192213880424,0,0,0,0,2.78907329578371,1.5740617341532,0.6970372701606,0.924100740528266,4.7907542728532,2.60979897622522,2.22389062924704,0.572499546967965,1.116475108079,0.316379424718726,0.953150969619124,0.511795582622668,1.28381696410176,9.22789418985217,2.35484592059769,0.899362287916574,0.823611089208164,0.942499218765491,2.42618977887979,0,2.10629228119491,3.41343617362713,2.43713489631284,1.05650146756755,0.409499734223957,3.25232493493539,7.910568163417,1.65409603063837,2.65375590096488,2.19225442626881,1.73632660280006,1.9676842561399,0.405820753925408,1.8589409885985,0.845086807596724,0.430234056612155,0.982490410131212,3.21003946333125,0,6.75544432952525,9.22025700287725,1.13841952129715,3.84928192269481,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.28853842595289,0,0,0,0,0,0,0,1.36940807419915,0,0,0,0.321176150207399,0,0,0,1.22896305723383,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.996239941255349,0.276283915531148,0,0,0,4.0435146396035,0,0,0,2.56472854656027,0,7.77958931012458,0,0.278304294485554,0,0,0,2.89999830173917,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,2.23155749661011,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,3.29762656060626,0,1.80784592624426,0.822251547880505,0.397429223405979,0.2532431838235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| ||
|short_description=p@chr5:140887589..140887627,+ | |short_description=p@chr5:140887589..140887627,+ | ||
}} | }} |
Latest revision as of 10:42, 30 July 2015
Short description: | p@chr5:140887589..140887627, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:140887589..140887627, + |
Coexpression cluster: | C4468_Mesenchymal_Fibroblast_Synoviocyte_Hair_leiomyoma_mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.89e-12 | 58 |
myoblast | 3.89e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.89e-12 | 58 |
fibroblast | 1.26e-11 | 76 |
smooth muscle cell | 1.58e-11 | 43 |
smooth muscle myoblast | 1.58e-11 | 43 |
extracellular matrix secreting cell | 7.67e-11 | 15 |
stromal cell | 9.33e-11 | 28 |
vascular associated smooth muscle cell | 1.11e-10 | 32 |
muscle cell | 1.63e-10 | 55 |
multi fate stem cell | 2.62e-09 | 427 |
somatic stem cell | 8.51e-09 | 433 |
electrically responsive cell | 1.07e-08 | 61 |
electrically active cell | 1.07e-08 | 61 |
stem cell | 3.81e-08 | 441 |
GAG secreting cell | 8.64e-08 | 9 |
carbohydrate secreting cell | 8.64e-08 | 9 |