FFCP PHASE1:Hg19::chr5:146864161..146864177,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:146864161..146864177,+
|short_description=p@chr5:146864161..146864177,+
|description=CAGE_peak_at_chr5:146864161..146864177,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:146864161..146864177,+ | |||
|coexpression_cluster_id=C565 | |||
|description=CAGE_peak_at_chr5:146864161..146864177,+ | |||
|id=chr5:146864161..146864177,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.65e-19!42;CL:0000860!4.55e-17!45;CL:0002320!6.29e-15!365;CL:0000557!1.12e-14!71;CL:0000134!1.13e-14!358;CL:0000766!3.49e-13!76;CL:0000219!1.08e-12!390;CL:0002009!1.24e-12!65;CL:0000839!9.39e-12!70;CL:0002194!3.86e-11!63;CL:0000576!3.86e-11!63;CL:0000040!3.86e-11!63;CL:0000559!3.86e-11!63;CL:0002393!3.93e-11!9;CL:0002397!3.93e-11!9;CL:0000034!9.04e-11!444;CL:0000048!2.26e-10!430;CL:0000723!7.77e-10!436;CL:0000763!3.09e-09!112;CL:0000049!3.09e-09!112;CL:0000569!9.19e-07!4;CL:0000011!9.19e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000569;2.74e-14;4!CL:0002393;4.43e-14;6!CL:0002397;4.43e-14;6!CL:0000048;4.79e-14;58!CL:0000034;6.84e-14;69!CL:0000723;7.73e-14;61!CL:0000134;5.37e-13;55!CL:0000767;9.54e-12;3!CL:0001014;8.59e-08;2!CL:0001016;8.59e-08;2!CL:0002195;2.00e-07;2!CL:0002571;2.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,1.30e-15,354;CL:0002320,4.42e-15,361;CL:0000569,2.57e-14,4;CL:0000011,2.57e-14,4;CL:0000219,3.24e-13,386;CL:0000034,1.08e-12,441;CL:0000767,8.17e-12,3;CL:0000048,6.16e-11,427;CL:0000723,1.27e-10,433;CL:0002393,4.08e-09,9;CL:0002397,4.08e-09,9;CL:0001014,1.30e-07,2;CL:0001016,1.30e-07,2;CL:0002195,2.45e-07,2;CL:0002571,2.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;2.74e-14;4 | |||
|ontology_enrichment_disease=DOID:2394!3.12e-16!14;DOID:193!1.85e-10!29;DOID:120!2.80e-10!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.87e-24;14!DOID:120;1.37e-13;27!DOID:193;1.74e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.50e-24,14;DOID:120,8.24e-14,27;DOID:193,1.09e-12,29 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-16!80;UBERON:0001474!3.01e-15!86;UBERON:0002384!3.28e-14!375;UBERON:0002390!9.67e-14!102;UBERON:0003061!9.67e-14!102;UBERON:0002193!2.01e-13!112;UBERON:0002405!4.36e-13!115;UBERON:0004765!1.11e-12!101;UBERON:0001434!1.11e-12!101;UBERON:0000992!1.94e-09!13;UBERON:0003081!6.51e-09!216;UBERON:0002118!1.64e-07!5;UBERON:0004532!1.64e-07!5;UBERON:0002119!8.44e-07!4;UBERON:0004531!8.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.19e-09;13!UBERON:0002119;5.04e-09;4!UBERON:0002371;3.06e-07;12!UBERON:0002118;4.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.33e-14,371;UBERON:0002371,1.09e-09,76;UBERON:0000992,1.20e-09,13;UBERON:0002119,4.93e-09,4;UBERON:0001474,1.08e-08,82;UBERON:0004765,1.40e-07,90;UBERON:0002405,3.26e-07,93;UBERON:0002118,4.11e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,4.98978217526377,5.72819656269481,0,0,0,0,0,31.1216465694938,5.53995408531877,1.00272223735071,3.47217393145363,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,1.89185783910868,1.03423704220986,0.645484683583826,1.35426486594342,0.188242339542605,0,1.12361742222542,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.852449501065388,0,0,0,0.502497330513487,0,1.52032191293582,0,0.368277635987565,0.949387162322653,0.422510572623884,1.27562579979026,1.25795187305026,0.112328631146495,0.750884464207532,0.803627933485401,0.570025487482497,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,99.1284964342694,13.4522055115569,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,1.72101972449288,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,1.07633781413317,0,0,1.50045548042201,0,3.09168648054755,0,0.843881661206331,0,0.504867548488229,0,0,3.19508633264953,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,1.42977993658148,0,0,0.325736184293735,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0.177561725313127,1.23190734020714,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0.667852230137435,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0,3.73124343213044,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,1.27746588066972,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0.544017803369474,1.0027595760908,1.53172788381731,1.31149052283922,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.895528817321244,2.80455971816669,3.32883516901568,3.21985108967651,4.27665432979378,3.55924488638614,4.34796129954155,2.26846385644859,1.39893480524502,3.69637874974085,4.77890301491107,0.899606224327209,7.14209601630793,4.56176828624941,1.86089200190596,1.5652351854352,10.5180326298053,2.66563648518157,2.44122439922797,5.27361111687422,0.537052785212442,4.64033759878494,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0.80057074828547,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.177404740325278,0,1.37190407549935,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,1.91107787795487,0,0,0,0,0,0,0.971421986118279,0.935757853848423,0.596852325484105,0,0,0,0.150962843566674,0,0,1.41095188908457,0,0.235676547101626,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.0645889098360061,0,0.784923038064294,0,0,0.435433495793923,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,4.98978217526377,5.72819656269481,0,0,0,0,0,31.1216465694938,5.53995408531877,1.00272223735071,3.47217393145363,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,1.89185783910868,1.03423704220986,0.645484683583826,1.35426486594342,0.188242339542605,0,1.12361742222542,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.852449501065388,0,0,0,0.502497330513487,0,1.52032191293582,0,0.368277635987565,0.949387162322653,0.422510572623884,1.27562579979026,1.25795187305026,0.112328631146495,0.750884464207532,0.803627933485401,0.570025487482497,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,99.1284964342694,13.4522055115569,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,1.72101972449288,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,1.07633781413317,0,0,1.50045548042201,0,3.09168648054755,0,0.843881661206331,0,0.504867548488229,0,0,3.19508633264953,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.576479813667846,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,1.42977993658148,0,0,0.325736184293735,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0.177561725313127,1.23190734020714,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0.667852230137435,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0,3.73124343213044,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,1.27746588066972,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0.544017803369474,1.0027595760908,1.53172788381731,1.31149052283922,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.895528817321244,2.80455971816669,3.32883516901568,3.21985108967651,4.27665432979378,3.55924488638614,4.34796129954155,2.26846385644859,1.39893480524502,3.69637874974085,4.77890301491107,0.899606224327209,7.14209601630793,4.56176828624941,1.86089200190596,1.5652351854352,10.5180326298053,2.66563648518157,2.44122439922797,5.27361111687422,0.537052785212442,4.64033759878494,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0.80057074828547,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0.177404740325278,0,1.37190407549935,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,1.91107787795487,0,0,0,0,0,0,0.971421986118279,0.935757853848423,0.596852325484105,0,0,0,0.150962843566674,0,0,1.41095188908457,0,0.235676547101626,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.0645889098360061,0,0.784923038064294,0,0,0.435433495793923,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr5:146864161..146864177,+ | |||
}} | }} |
Latest revision as of 11:11, 30 July 2015
Short description: | p@chr5:146864161..146864177, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:146864161..146864177, + |
Coexpression cluster: | C565_CD34_CD133_acute_thymus_Hodgkin_Burkitt_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 1.30e-15 | 354 |
connective tissue cell | 4.42e-15 | 361 |
cardiac mesenchymal cell | 2.57e-14 | 4 |
migratory trunk neural crest cell | 2.57e-14 | 4 |
motile cell | 3.24e-13 | 386 |
stem cell | 1.08e-12 | 441 |
basophil | 8.17e-12 | 3 |
multi fate stem cell | 6.16e-11 | 427 |
somatic stem cell | 1.27e-10 | 433 |
intermediate monocyte | 4.08e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.08e-09 | 9 |
CD1a-positive Langerhans cell | 1.30e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.30e-07 | 2 |
hepatic stem cell | 2.45e-07 | 2 |
hepatic mesenchymal stem cell | 2.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.33e-14 | 371 |
bone marrow | 1.09e-09 | 76 |
female gonad | 1.20e-09 | 13 |
left ovary | 4.93e-09 | 4 |
bone element | 1.08e-08 | 82 |
skeletal element | 1.40e-07 | 90 |
immune system | 3.26e-07 | 93 |
right ovary | 4.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.50e-24 | 14 |
female reproductive organ cancer | 8.24e-14 | 27 |
reproductive organ cancer | 1.09e-12 | 29 |