FFCP PHASE1:Hg19::chr5:156540141..156540159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:156540141..156540159,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr5:156540141..156540159,- | |description=CAGE_peak_at_chr5:156540141..156540159,- | ||
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|ontology_enrichment_celltype_v019=CL:0000860;4.32e-89;33!CL:0002057;4.32e-89;33!CL:0000473;3.24e-63;39!CL:0000234;3.24e-63;39!CL:0000576;1.20e-44;48!CL:0000766;6.04e-23;69!CL:0000763;1.08e-12;100!CL:0002087;3.63e-12;104!CL:0000840;1.19e-10;5!CL:0000738;1.48e-08;136!CL:0002581;4.72e-08;1!CL:0000990;2.92e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;4.32e-89;33!CL:0002057;4.32e-89;33!CL:0000473;3.24e-63;39!CL:0000234;3.24e-63;39!CL:0000576;1.20e-44;48!CL:0000766;6.04e-23;69!CL:0000763;1.08e-12;100!CL:0002087;3.63e-12;104!CL:0000840;1.19e-10;5!CL:0000738;1.48e-08;136!CL:0002581;4.72e-08;1!CL:0000990;2.92e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.39e-76,42;CL:0002057,3.39e-76,42;CL:0002194,7.83e-68,59;CL:0000576,7.83e-68,59;CL:0000040,7.83e-68,59;CL:0000559,7.83e-68,59;CL:0000473,3.54e-66,48;CL:0000234,3.54e-66,48;CL:0002009,1.65e-65,61;CL:0000839,2.66e-60,66;CL:0000557,2.37e-59,67;CL:0000766,5.39e-55,72;CL:0000763,2.12e-35,108;CL:0000049,2.12e-35,108;CL:0002087,5.33e-33,115;CL:0002031,1.87e-31,120;CL:0000738,2.90e-27,136;CL:0002032,2.28e-22,161;CL:0000837,2.28e-22,161;CL:0000037,2.95e-21,168;CL:0000988,5.92e-20,177;CL:0000134,9.75e-12,354;CL:0002320,2.04e-11,361;CL:0000840,1.23e-10,5;CL:0001029,1.23e-10,5;CL:0000219,2.78e-10,386;CL:0000048,6.83e-09,427;CL:0000723,1.06e-08,433;CL:0000034,1.88e-08,441;CL:0002581,4.41e-08,1;CL:0000990,2.98e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-54;42!CL:0000049;1.68e-12;108 | |ontology_enrichment_development_v019=CL:0002057;1.53e-54;42!CL:0000049;1.68e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.41e-50!80;UBERON:0002390!6.20e-47!102;UBERON:0003061!6.20e-47!102;UBERON:0001474!3.38e-46!86;UBERON:0002193!2.12e-43!112;UBERON:0004765!1.63e-37!101;UBERON:0001434!1.63e-37!101;UBERON:0002405!2.43e-36!115;UBERON:0002204!6.25e-19!167;UBERON:0003081!4.33e-17!216;UBERON:0002384!6.28e-10!375;UBERON:0001896!2.74e-07!3;UBERON:0005290!2.74e-07!3;UBERON:0010096!2.74e-07!3 | |ontology_enrichment_uberon=UBERON:0002371!1.41e-50!80;UBERON:0002390!6.20e-47!102;UBERON:0003061!6.20e-47!102;UBERON:0001474!3.38e-46!86;UBERON:0002193!2.12e-43!112;UBERON:0004765!1.63e-37!101;UBERON:0001434!1.63e-37!101;UBERON:0002405!2.43e-36!115;UBERON:0002204!6.25e-19!167;UBERON:0003081!4.33e-17!216;UBERON:0002384!6.28e-10!375;UBERON:0001896!2.74e-07!3;UBERON:0005290!2.74e-07!3;UBERON:0010096!2.74e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.47e-52,76;UBERON:0001474,7.50e-48,82;UBERON:0004765,2.89e-43,90;UBERON:0002405,9.56e-42,93;UBERON:0002390,2.03e-39,98;UBERON:0003061,2.03e-39,98;UBERON:0001434,1.50e-38,100;UBERON:0002193,2.12e-35,108;UBERON:0002204,2.07e-21,167;UBERON:0003081,7.82e-17,203;UBERON:0002384,5.61e-11,371;UBERON:0000926,3.14e-09,315;UBERON:0004120,3.14e-09,315;UBERON:0006603,3.14e-09,315 | |||
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| ||
|short_description=p@chr5:156540141..156540159,- | |short_description=p@chr5:156540141..156540159,- | ||
}} | }} |
Latest revision as of 12:15, 30 July 2015
Short description: | p@chr5:156540141..156540159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:156540141..156540159, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.47e-52 | 76 |
bone element | 7.50e-48 | 82 |
skeletal element | 2.89e-43 | 90 |
immune system | 9.56e-42 | 93 |
hematopoietic system | 2.03e-39 | 98 |
blood island | 2.03e-39 | 98 |
skeletal system | 1.50e-38 | 100 |
hemolymphoid system | 2.12e-35 | 108 |
musculoskeletal system | 2.07e-21 | 167 |
lateral plate mesoderm | 7.82e-17 | 203 |
connective tissue | 5.61e-11 | 371 |
mesoderm | 3.14e-09 | 315 |
mesoderm-derived structure | 3.14e-09 | 315 |
presumptive mesoderm | 3.14e-09 | 315 |