FFCP PHASE1:Hg19::chr6:138014261..138014274,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:138014261..138014274,+
|short_description=p@chr6:138014261..138014274,+
|description=CAGE_peak_at_chr6:138014261..138014274,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:138014261..138014274,+ | |||
|description=CAGE_peak_at_chr6:138014261..138014274,+ | |||
|id=chr6:138014261..138014274,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.31e-09!16;CL:0002166!1.08e-08!3;CL:1000497!2.29e-08!18;CL:0002518!2.29e-08!18;CL:1000507!1.62e-07!12;CL:1000494!1.62e-07!12;CL:0002681!8.47e-07!13;CL:0002584!8.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.13e-17;15!CL:1000497;1.38e-15;17!CL:0002518;1.38e-15;17!CL:0000222;9.60e-12;1!CL:0000313;9.60e-12;1!CL:1000507;2.41e-10;10!CL:1000494;2.41e-10;10!CL:0002188;2.91e-09;5!CL:0002681;1.68e-08;12!CL:0002584;1.68e-08;12!CL:1000746;7.41e-07;7!CL:1000612;7.41e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.59e-18,15;CL:1000497,1.08e-15,17;CL:0002518,1.08e-15,17;CL:0000313,1.81e-11,1;CL:1000507,2.20e-10,10;CL:1000494,2.20e-10,10;CL:0002188,2.36e-09,5;CL:0002681,1.48e-08,12;CL:0002584,1.48e-08,12;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.64e-12;1 | |||
|ontology_enrichment_disease=DOID:193!7.64e-21!29;DOID:120!3.61e-20!27;DOID:2394!9.76e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.60e-12;1!DOID:2394;3.05e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.81e-11,1;DOID:2394,3.87e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000992!1.32e-14!13;UBERON:0003886!9.99e-14!63;UBERON:0002118!8.49e-13!5;UBERON:0004532!8.49e-13!5;UBERON:0000991!3.33e-12!21;UBERON:0009196!3.33e-12!21;UBERON:0009117!3.33e-12!21;UBERON:0005564!3.33e-12!21;UBERON:0002553!9.05e-12!70;UBERON:0004876!1.13e-11!20;UBERON:0004176!1.56e-11!22;UBERON:0006555!2.04e-11!17;UBERON:0005103!2.04e-11!17;UBERON:0000083!2.04e-11!17;UBERON:0009201!2.04e-11!17;UBERON:0004819!2.04e-11!17;UBERON:0006553!2.04e-11!17;UBERON:0003074!2.04e-11!17;UBERON:0003060!2.04e-11!17;UBERON:0003133!9.72e-11!48;UBERON:0000080!1.13e-10!18;UBERON:0002120!1.13e-10!18;UBERON:0004875!1.13e-10!18;UBERON:0005721!1.13e-10!18;UBERON:0005754!1.13e-10!18;UBERON:0007297!1.13e-10!18;UBERON:0003914!2.45e-10!118;UBERON:0004211!1.31e-09!16;UBERON:0001285!1.31e-09!16;UBERON:0007684!1.31e-09!16;UBERON:0003220!1.31e-09!16;UBERON:0004208!1.31e-09!16;UBERON:0005156!5.31e-09!59;UBERON:0000990!5.31e-09!59;UBERON:0003887!7.21e-09!21;UBERON:0003134!1.86e-08!37;UBERON:0000474!1.86e-08!37;UBERON:0000058!3.10e-08!26;UBERON:0003103!1.41e-07!69;UBERON:0009773!1.62e-07!12;UBERON:0001231!1.62e-07!12;UBERON:0004810!1.62e-07!12;UBERON:0003064!1.77e-07!37;UBERON:0003100!2.40e-07!41;UBERON:0000464!7.27e-07!104;UBERON:0001225!8.47e-07!13;UBERON:0008987!8.47e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.13e-17;15!UBERON:0004819;1.13e-17;15!UBERON:0001285;1.13e-17;15!UBERON:0007684;1.13e-17;15!UBERON:0001301;9.60e-12;1!UBERON:0004911;9.60e-12;1!UBERON:0002113;5.13e-11;24!UBERON:0011143;5.13e-11;24!UBERON:0004211;2.41e-10;10!UBERON:0009773;2.41e-10;10!UBERON:0001231;2.41e-10;10!UBERON:0004810;2.41e-10;10!UBERON:0000489;4.27e-09;29!UBERON:0006554;8.68e-09;30!UBERON:0001008;8.68e-09;30!UBERON:0001225;1.68e-08;12!UBERON:0008987;1.68e-08;12!UBERON:0001851;6.77e-07;15!UBERON:0000353;6.77e-07;15!UBERON:0000074;7.41e-07;7!UBERON:0001229;7.41e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,1.14e-23,16;UBERON:0004819,1.14e-23,16;UBERON:0004211,8.59e-18,15;UBERON:0009773,8.59e-18,15;UBERON:0001231,8.59e-18,15;UBERON:0001285,8.59e-18,15;UBERON:0007684,8.59e-18,15;UBERON:0004208,8.59e-18,15;UBERON:0002113,1.95e-14,26;UBERON:0003918,1.95e-14,26;UBERON:0011143,1.95e-14,26;UBERON:0005095,1.95e-14,26;UBERON:0007687,1.95e-14,26;UBERON:0005103,1.88e-12,8;UBERON:0000083,1.88e-12,8;UBERON:0009201,1.88e-12,8;UBERON:0006553,1.88e-12,8;UBERON:0003074,1.88e-12,8;UBERON:0003060,1.88e-12,8;UBERON:0000489,4.79e-12,31;UBERON:0001301,5.62e-12,1;UBERON:0004911,1.81e-11,1;UBERON:0000080,3.95e-11,9;UBERON:0002120,3.95e-11,9;UBERON:0004875,3.95e-11,9;UBERON:0005721,3.95e-11,9;UBERON:0005754,3.95e-11,9;UBERON:0007297,3.95e-11,9;UBERON:0004810,2.20e-10,10;UBERON:0004876,3.34e-09,11;UBERON:0003103,4.44e-09,68;UBERON:0001225,1.48e-08,12;UBERON:0008987,1.48e-08,12;UBERON:0003887,1.77e-08,12;UBERON:0006554,8.43e-08,47;UBERON:0003914,1.21e-07,117;UBERON:0001008,1.25e-07,48;UBERON:0001851,6.12e-07,15;UBERON:0000353,6.12e-07,15;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7;UBERON:0005172,9.90e-07,54;UBERON:0005173,9.90e-07,54 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.18376766658517,0.425325291727159,0,0,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,3.38867483259425,0,2.92278449306521,2.84989398010764,0,0,1.29549549661284,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0.18532421910392,1.43124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0.842516912477962,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0.608731130888112,0.6196469961995,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,2.61172493054636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.261177619741208,1.57254001417827,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,1.14186133417987,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0.15543720058278,1.92211694986524,1.27437413730962,0.449803112163605,0.621051827505038,0,0,1.04349012362347,0,0,0.813741466409323,0.727394636810238,0.429642228169954,0.928067519756987,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,1.00669888618013,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr6:138014261..138014274,+ | |||
}} | }} |
Latest revision as of 19:59, 30 July 2015
Short description: | p@chr6:138014261..138014274, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138014261..138014274, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.59e-18 | 15 |
kidney cell | 1.08e-15 | 17 |
kidney epithelial cell | 1.08e-15 | 17 |
serous secreting cell | 1.81e-11 | 1 |
kidney tubule cell | 2.20e-10 | 10 |
nephron tubule epithelial cell | 2.20e-10 | 10 |
glomerular endothelial cell | 2.36e-09 | 5 |
kidney cortical cell | 1.48e-08 | 12 |
renal cortical epithelial cell | 1.48e-08 | 12 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.81e-11 | 1 |
ovarian cancer | 3.87e-07 | 14 |