FFCP PHASE1:Hg19::chr6:149461279..149461299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:149461279..149461299,+ | |||
|coexpression_cluster_id=C2513 | |coexpression_cluster_id=C2513 | ||
|description=CAGE_peak_at_chr6:149461279..149461299,+ | |description=CAGE_peak_at_chr6:149461279..149461299,+ | ||
|id=chr6:149461279..149461299,+ | |id=chr6:149461279..149461299,+ | ||
|ontology_enrichment_celltype=CL:0000084;2.35e-30;25!CL:0000791;1.96e-15;18!CL:0000789;1.96e-15;18!CL:0002419;1.96e-15;18!CL:0000624;2.42e-12;6!CL:0000898;1.82e-11;3!CL:0002127;7.97e-10;1!CL:0000911;7.97e-10;1!CL:0000814;7.97e-10;1!CL:0000542;3.24e-09;53!CL:0000895;4.15e-09;1 | |ontology_enrichment_celltype=CL:0000084!1.68e-28!25;CL:0000827!1.68e-28!25;CL:0000791!4.38e-24!18;CL:0000789!4.38e-24!18;CL:0002420!4.38e-24!18;CL:0002419!4.38e-24!18;CL:0000790!4.38e-24!18;CL:0000838!9.44e-23!52;CL:0000542!3.48e-22!53;CL:0000051!3.48e-22!53;CL:0000988!1.09e-20!182;CL:0000037!6.74e-19!172;CL:0000566!6.74e-19!172;CL:0000625!1.09e-16!11;CL:0002032!5.63e-16!165;CL:0000837!5.63e-16!165;CL:0000738!4.27e-14!140;CL:0002087!1.15e-12!119;CL:0000080!1.22e-10!6;CL:0002031!4.96e-10!124;CL:0000623!4.34e-08!3;CL:0000825!4.34e-08!3;CL:0000624!6.46e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000084;2.35e-30;25!CL:0000791;1.96e-15;18!CL:0000789;1.96e-15;18!CL:0002419;1.96e-15;18!CL:0000624;2.42e-12;6!CL:0000898;1.82e-11;3!CL:0002127;7.97e-10;1!CL:0000911;7.97e-10;1!CL:0000814;7.97e-10;1!CL:0000542;3.24e-09;53!CL:0000895;4.15e-09;1 | ||
|ontology_enrichment_disease=DOID:0060060;1.21e-09;1!DOID:0060061;1.21e-09;1!DOID:8691;1.21e-09;1!DOID:0060058;7.00e-08;10 | |ontology_enrichment_celltype_v019_2=CL:0000084,2.17e-30,25;CL:0000827,2.17e-30,25;CL:0000893,2.44e-17,2;CL:0002489,2.44e-17,2;CL:0000809,2.44e-17,2;CL:0000808,2.44e-17,2;CL:0000894,2.44e-17,2;CL:0000806,2.44e-17,2;CL:0000807,2.44e-17,2;CL:0000805,2.44e-17,2;CL:0002425,2.44e-17,2;CL:0000838,1.06e-16,52;CL:0000542,2.37e-16,53;CL:0000051,2.37e-16,53;CL:0000791,1.68e-15,18;CL:0000789,1.68e-15,18;CL:0002420,1.68e-15,18;CL:0002419,1.68e-15,18;CL:0000790,1.68e-15,18;CL:0000624,1.95e-12,6;CL:0000898,1.43e-11,3;CL:0002127,7.98e-10,1;CL:0000914,7.98e-10,1;CL:0000911,7.98e-10,1;CL:0000814,7.98e-10,1;CL:0002042,7.98e-10,1;CL:0002039,7.98e-10,1;CL:0002040,7.98e-10,1;CL:0002041,7.98e-10,1;CL:0000810,3.00e-09,1;CL:0000895,3.00e-09,1;CL:0002436,3.00e-09,1;CL:0002427,3.00e-09,1;CL:0002428,3.00e-09,1;CL:0002429,3.00e-09,1;CL:0002433,3.00e-09,1;CL:0002431,3.00e-09,1;CL:0002432,3.00e-09,1;CL:0000988,1.25e-08,177 | ||
|ontology_enrichment_uberon=UBERON:0002331;4.30e-08;10 | |ontology_enrichment_development_v019=CL:0002425;3.38e-17;2!CL:0000790;1.96e-15;18!CL:0000051;3.24e-09;53!CL:0002427;4.15e-09;1 | ||
|ontology_enrichment_disease=DOID:2531!3.23e-07!51;DOID:0060083!3.23e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.21e-09;1!DOID:0060061;1.21e-09;1!DOID:8691;1.21e-09;1!DOID:0060058;7.00e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.32e-09,1;DOID:0060061,1.32e-09,1;DOID:8691,1.32e-09,1;DOID:0060058,7.42e-08,10;DOID:2531,5.78e-07,51;DOID:0060083,5.78e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.82e-15!15;UBERON:0000179!7.82e-15!15;UBERON:0000463!7.82e-15!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.30e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.99e-09,4;UBERON:0005058,3.99e-09,4;UBERON:0009113,3.99e-09,4;UBERON:0003295,3.99e-09,4;UBERON:0005562,3.99e-09,4;UBERON:0002331,4.30e-08,10;UBERON:0000358,4.30e-08,10;UBERON:0000307,4.30e-08,10;UBERON:0000091,4.30e-08,10;UBERON:0000087,4.30e-08,10;UBERON:0007010,4.30e-08,10;UBERON:0007806,4.30e-08,10;UBERON:0008780,4.30e-08,10;UBERON:0005728,4.30e-08,10 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.157421562627358,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,1.57204305099666,0.205601498999509,2.00623794468814,0,0.473447805734733,0,7.35309015442146,2.06224135232386,0.221533894583621,1.08321545506006,0.768547918354051,3.64166173167659,1.64437904603676,6.07970039128866,3.18783394308558,0.14828656316206,0,0,7.59172596073693,1.91610246800961,0.34362744548263,1.26509846009751,1.27426165729639,0.651083453856419,0.950452044448374,0.752875595388864,2.30375900077953,0,0.473554504088034,0,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7708168225695,0.788123040807709,0.431255149719035,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.822724546172388,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,1.59663497146253,0.191505370132367,0,0,1.40398589056729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0.146508179271894,0,2.00598091699461,0,0,0,0,0,0,0,5.27372397525631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0.189753732724185,0.476809736941136,0,0,0,0,0,0.265372693510018,0,8.00607047437679,11.8621381388643,13.7836973347201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0.163565394255844,0,0,0,7.19954625077748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr6:149461279..149461299,+ | |short_description=p@chr6:149461279..149461299,+ | ||
}} | }} |
Latest revision as of 20:46, 30 July 2015
Short description: | p@chr6:149461279..149461299, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:149461279..149461299, + |
Coexpression cluster: | C2513_cord_mycosis_CD4_thymus_NK_chronic_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.99e-09 | 4 |
hemolymphoid system gland | 3.99e-09 | 4 |
thymic region | 3.99e-09 | 4 |
pharyngeal gland | 3.99e-09 | 4 |
thymus primordium | 3.99e-09 | 4 |
umbilical cord | 4.30e-08 | 10 |
blastocyst | 4.30e-08 | 10 |
blastula | 4.30e-08 | 10 |
bilaminar disc | 4.30e-08 | 10 |
inner cell mass | 4.30e-08 | 10 |
cleaving embryo | 4.30e-08 | 10 |
connecting stalk | 4.30e-08 | 10 |
inner cell mass derived epiblast | 4.30e-08 | 10 |
extraembryonic mesoderm | 4.30e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.32e-09 | 1 |
cutaneous T cell lymphoma | 1.32e-09 | 1 |
mycosis fungoides | 1.32e-09 | 1 |
lymphoma | 7.42e-08 | 10 |
hematologic cancer | 5.78e-07 | 51 |
immune system cancer | 5.78e-07 | 51 |