FFCP PHASE1:Hg19::chr6:149461279..149461299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:149461279..149461299,+ | |||
|coexpression_cluster_id=C2513 | |coexpression_cluster_id=C2513 | ||
|description=CAGE_peak_at_chr6:149461279..149461299,+ | |description=CAGE_peak_at_chr6:149461279..149461299,+ | ||
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|ontology_enrichment_celltype=CL:0000084!1.68e-28!25;CL:0000827!1.68e-28!25;CL:0000791!4.38e-24!18;CL:0000789!4.38e-24!18;CL:0002420!4.38e-24!18;CL:0002419!4.38e-24!18;CL:0000790!4.38e-24!18;CL:0000838!9.44e-23!52;CL:0000542!3.48e-22!53;CL:0000051!3.48e-22!53;CL:0000988!1.09e-20!182;CL:0000037!6.74e-19!172;CL:0000566!6.74e-19!172;CL:0000625!1.09e-16!11;CL:0002032!5.63e-16!165;CL:0000837!5.63e-16!165;CL:0000738!4.27e-14!140;CL:0002087!1.15e-12!119;CL:0000080!1.22e-10!6;CL:0002031!4.96e-10!124;CL:0000623!4.34e-08!3;CL:0000825!4.34e-08!3;CL:0000624!6.46e-07!6 | |ontology_enrichment_celltype=CL:0000084!1.68e-28!25;CL:0000827!1.68e-28!25;CL:0000791!4.38e-24!18;CL:0000789!4.38e-24!18;CL:0002420!4.38e-24!18;CL:0002419!4.38e-24!18;CL:0000790!4.38e-24!18;CL:0000838!9.44e-23!52;CL:0000542!3.48e-22!53;CL:0000051!3.48e-22!53;CL:0000988!1.09e-20!182;CL:0000037!6.74e-19!172;CL:0000566!6.74e-19!172;CL:0000625!1.09e-16!11;CL:0002032!5.63e-16!165;CL:0000837!5.63e-16!165;CL:0000738!4.27e-14!140;CL:0002087!1.15e-12!119;CL:0000080!1.22e-10!6;CL:0002031!4.96e-10!124;CL:0000623!4.34e-08!3;CL:0000825!4.34e-08!3;CL:0000624!6.46e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-30;25!CL:0000791;1.96e-15;18!CL:0000789;1.96e-15;18!CL:0002419;1.96e-15;18!CL:0000624;2.42e-12;6!CL:0000898;1.82e-11;3!CL:0002127;7.97e-10;1!CL:0000911;7.97e-10;1!CL:0000814;7.97e-10;1!CL:0000542;3.24e-09;53!CL:0000895;4.15e-09;1 | |ontology_enrichment_celltype_v019=CL:0000084;2.35e-30;25!CL:0000791;1.96e-15;18!CL:0000789;1.96e-15;18!CL:0002419;1.96e-15;18!CL:0000624;2.42e-12;6!CL:0000898;1.82e-11;3!CL:0002127;7.97e-10;1!CL:0000911;7.97e-10;1!CL:0000814;7.97e-10;1!CL:0000542;3.24e-09;53!CL:0000895;4.15e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.17e-30,25;CL:0000827,2.17e-30,25;CL:0000893,2.44e-17,2;CL:0002489,2.44e-17,2;CL:0000809,2.44e-17,2;CL:0000808,2.44e-17,2;CL:0000894,2.44e-17,2;CL:0000806,2.44e-17,2;CL:0000807,2.44e-17,2;CL:0000805,2.44e-17,2;CL:0002425,2.44e-17,2;CL:0000838,1.06e-16,52;CL:0000542,2.37e-16,53;CL:0000051,2.37e-16,53;CL:0000791,1.68e-15,18;CL:0000789,1.68e-15,18;CL:0002420,1.68e-15,18;CL:0002419,1.68e-15,18;CL:0000790,1.68e-15,18;CL:0000624,1.95e-12,6;CL:0000898,1.43e-11,3;CL:0002127,7.98e-10,1;CL:0000914,7.98e-10,1;CL:0000911,7.98e-10,1;CL:0000814,7.98e-10,1;CL:0002042,7.98e-10,1;CL:0002039,7.98e-10,1;CL:0002040,7.98e-10,1;CL:0002041,7.98e-10,1;CL:0000810,3.00e-09,1;CL:0000895,3.00e-09,1;CL:0002436,3.00e-09,1;CL:0002427,3.00e-09,1;CL:0002428,3.00e-09,1;CL:0002429,3.00e-09,1;CL:0002433,3.00e-09,1;CL:0002431,3.00e-09,1;CL:0002432,3.00e-09,1;CL:0000988,1.25e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002425;3.38e-17;2!CL:0000790;1.96e-15;18!CL:0000051;3.24e-09;53!CL:0002427;4.15e-09;1 | |ontology_enrichment_development_v019=CL:0002425;3.38e-17;2!CL:0000790;1.96e-15;18!CL:0000051;3.24e-09;53!CL:0002427;4.15e-09;1 | ||
|ontology_enrichment_disease=DOID:2531!3.23e-07!51;DOID:0060083!3.23e-07!51 | |ontology_enrichment_disease=DOID:2531!3.23e-07!51;DOID:0060083!3.23e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.21e-09;1!DOID:0060061;1.21e-09;1!DOID:8691;1.21e-09;1!DOID:0060058;7.00e-08;10 | |ontology_enrichment_disease_v019=DOID:0060060;1.21e-09;1!DOID:0060061;1.21e-09;1!DOID:8691;1.21e-09;1!DOID:0060058;7.00e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.32e-09,1;DOID:0060061,1.32e-09,1;DOID:8691,1.32e-09,1;DOID:0060058,7.42e-08,10;DOID:2531,5.78e-07,51;DOID:0060083,5.78e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.82e-15!15;UBERON:0000179!7.82e-15!15;UBERON:0000463!7.82e-15!15 | |ontology_enrichment_uberon=UBERON:0000178!7.82e-15!15;UBERON:0000179!7.82e-15!15;UBERON:0000463!7.82e-15!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.30e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.30e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.99e-09,4;UBERON:0005058,3.99e-09,4;UBERON:0009113,3.99e-09,4;UBERON:0003295,3.99e-09,4;UBERON:0005562,3.99e-09,4;UBERON:0002331,4.30e-08,10;UBERON:0000358,4.30e-08,10;UBERON:0000307,4.30e-08,10;UBERON:0000091,4.30e-08,10;UBERON:0000087,4.30e-08,10;UBERON:0007010,4.30e-08,10;UBERON:0007806,4.30e-08,10;UBERON:0008780,4.30e-08,10;UBERON:0005728,4.30e-08,10 | |||
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| ||
|short_description=p@chr6:149461279..149461299,+ | |short_description=p@chr6:149461279..149461299,+ | ||
}} | }} |
Latest revision as of 20:46, 30 July 2015
Short description: | p@chr6:149461279..149461299, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:149461279..149461299, + |
Coexpression cluster: | C2513_cord_mycosis_CD4_thymus_NK_chronic_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.99e-09 | 4 |
hemolymphoid system gland | 3.99e-09 | 4 |
thymic region | 3.99e-09 | 4 |
pharyngeal gland | 3.99e-09 | 4 |
thymus primordium | 3.99e-09 | 4 |
umbilical cord | 4.30e-08 | 10 |
blastocyst | 4.30e-08 | 10 |
blastula | 4.30e-08 | 10 |
bilaminar disc | 4.30e-08 | 10 |
inner cell mass | 4.30e-08 | 10 |
cleaving embryo | 4.30e-08 | 10 |
connecting stalk | 4.30e-08 | 10 |
inner cell mass derived epiblast | 4.30e-08 | 10 |
extraembryonic mesoderm | 4.30e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.32e-09 | 1 |
cutaneous T cell lymphoma | 1.32e-09 | 1 |
mycosis fungoides | 1.32e-09 | 1 |
lymphoma | 7.42e-08 | 10 |
hematologic cancer | 5.78e-07 | 51 |
immune system cancer | 5.78e-07 | 51 |