FFCP PHASE1:Hg19::chr6:151127384..151127385,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:151127384..151127385,+ | |||
|description=CAGE_peak_at_chr6:151127384..151127385,+ | |description=CAGE_peak_at_chr6:151127384..151127385,+ | ||
|id=chr6:151127384..151127385,+ | |id=chr6:151127384..151127385,+ | ||
|ontology_enrichment_celltype=CL:0002605;2.12e-10;3!CL:0000945;6.50e-09;24!CL:0000236;3.35e-08;13!CL:0000128;2.26e-07;7!CL:0000126;2.26e-07;7!CL:0000127;2.26e-07;7 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002605;2.12e-10;3!CL:0000945;6.50e-09;24!CL:0000236;3.35e-08;13!CL:0000128;2.26e-07;7!CL:0000126;2.26e-07;7!CL:0000127;2.26e-07;7 | ||
|ontology_enrichment_disease=DOID:0060058;8.73e-08;10 | |ontology_enrichment_celltype_v019_2=CL:0002605,1.72e-10,3;CL:0000945,5.57e-09,24;CL:0000826,5.57e-09,24;CL:0000128,1.48e-07,7;CL:0000126,1.48e-07,7;CL:0000127,1.48e-07,7;CL:0002453,1.48e-07,7;CL:0000236,1.67e-07,14 | ||
|ontology_enrichment_uberon=UBERON:0000922;1.75e-08;49!UBERON:0000956;5.71e-08;25!UBERON:0000203;5.71e-08;25!UBERON:0003528;9.83e-08;34!UBERON:0002020;9.83e-08;34!UBERON:0001897;3.10e-07;2!UBERON:0010225;3.10e-07;2!UBERON:0002148;9.96e-07;2!UBERON:0006331;9.96e-07;2!UBERON:0009662;9.96e-07;2 | |ontology_enrichment_development_v019=UBERON:0006965;9.96e-07;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.10e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-23!115;UBERON:0001049!2.16e-14!57;UBERON:0005068!2.16e-14!57;UBERON:0006241!2.16e-14!57;UBERON:0007135!2.16e-14!57;UBERON:0002020!2.12e-12!34;UBERON:0003528!2.12e-12!34;UBERON:0001893!6.02e-12!34;UBERON:0002791!1.37e-11!33;UBERON:0003075!2.07e-11!86;UBERON:0007284!2.07e-11!86;UBERON:0002780!2.66e-11!41;UBERON:0001890!2.66e-11!41;UBERON:0006240!2.66e-11!41;UBERON:0002616!3.19e-11!59;UBERON:0002346!3.73e-11!90;UBERON:0000956!6.59e-11!25;UBERON:0000203!6.59e-11!25;UBERON:0001869!8.50e-11!32;UBERON:0003080!8.85e-11!42;UBERON:0001017!9.91e-11!82;UBERON:0005743!4.47e-10!86;UBERON:0000955!2.49e-09!69;UBERON:0006238!2.49e-09!69;UBERON:0001950!6.92e-09!20;UBERON:0002619!1.30e-08!22;UBERON:0000073!2.26e-08!94;UBERON:0001016!2.26e-08!94;UBERON:0003056!7.43e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.75e-08;49!UBERON:0000956;5.71e-08;25!UBERON:0000203;5.71e-08;25!UBERON:0003528;9.83e-08;34!UBERON:0002020;9.83e-08;34!UBERON:0001897;3.10e-07;2!UBERON:0010225;3.10e-07;2!UBERON:0002148;9.96e-07;2!UBERON:0006331;9.96e-07;2!UBERON:0009662;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.49e-10,82;UBERON:0007284,1.49e-10,82;UBERON:0002346,7.77e-10,86;UBERON:0001049,1.46e-09,56;UBERON:0005068,1.46e-09,56;UBERON:0006241,1.46e-09,56;UBERON:0007135,1.46e-09,56;UBERON:0010371,2.90e-08,104;UBERON:0003528,3.27e-08,34;UBERON:0002020,3.27e-08,34;UBERON:0000956,6.42e-08,25;UBERON:0000203,6.42e-08,25;UBERON:0000073,1.09e-07,53;UBERON:0002616,1.09e-07,53;UBERON:0001017,2.94e-07,81;UBERON:0001016,4.96e-07,89;UBERON:0001897,5.51e-07,2;UBERON:0010225,5.51e-07,2;UBERON:0002148,7.22e-07,2;UBERON:0006331,7.22e-07,2;UBERON:0009662,7.22e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,2.57612388417951,2.46373965131192,2.51085279189606,0.305653622991805,0.164201178899891,0.393553906568396,0,0,0,0,0.30120591877825,0,1.47187681102573,1.9903692548239,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,2.98711155796555,1.20118796110804,0,0.661044872784862,0,3.98449078376614,1.17447437874188,2.29363936875137,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.664601683750863,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,1.79616152611729,0.221729397462564,1.75669571386252,0.392937226493138,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0,0.417989933073621,0.775250277507987,1.42306505074684,1.67360306382335,0.402829317109147,0,0.732186172644509,0,0,0.982297011124877,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,0,0,0.590789906681404,3.97316789473185,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0.40101294060657,0,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.618246069886334,0.54941678891006,0.41254749960294,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0,0,1.58625035258854,0,4.81239927631679,0,0.185803175125719,0,2.63224820389132,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,4.22961015263549,0.561421621224659,0.293016358543788,0,0,0.568272293612826,0,0,0,0.994147647766298,1.1253553312841,0,0,0,1.19548792950642,0.276283915531148,0.503865495708552,1.94310496754094,0,0,0,0.537063524026827,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0.868124974666461,0,0.120596438625408,0,0.110579259931225,1.18219047581419,0.438770794307945,0.435753854075961,0.139423744278603,0.538651809526579,0,0.46112780877612,0.628303510868405,1.52106320690811,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0.163232808159148,0.141353071433941,0.649165919226273,1.99052386215701,0.353830258013357,2.4441205797345,0.889563386041866,0.741383633679017,0.939797545549098,0.741412462787447,0.802577647298789,0,4.01400536274465,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0.518440956986236,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.176512253383001,0.451961481561065,0.137041924646751,0,0.379864775735272,0,0,0.213452994739353,0,0.144090417154106,2.51980511565014,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0.788662062837943,0.279282401272254,1.3749625440701,2.15361907373044,0.199679000498991,0.858452096273142,0,0.873385142327441,0,0,0,0,0,0.393709926058995,0.254019996197353,0,0.408610218334727,0,0.275078873194468,0,1.1248694577575,0,0.182248669974074,0,0.236417121897595,0.314727528809989,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0.511164065356265,0,0.146552233678082,1.32506888912221,1.93924434542326,1.19009341568421,0.171086837884329,0,0.213574825135389,1.10043013569766,2.07119527673598,0.992332043623902,0,4.38453354171225,0.638341257770182,0.544017803369474,1.0027595760908,0.612691153526923,0.655745261419609,1.25643277000187,0,0.122026264901963,0.500763722825999,0.573409195690071,0.554645257684261,0.807253238237985,0,0.124980407962107,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0,0,0.553033744606923,2.33832370607266,0.797189041880179,0.490696182767533,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.1239357642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|short_description=p@chr6:151127384..151127385,+ | |short_description=p@chr6:151127384..151127385,+ | ||
}} | }} |
Latest revision as of 20:55, 30 July 2015
Short description: | p@chr6:151127384..151127385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:151127384..151127385, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.72e-10 | 3 |
lymphocyte of B lineage | 5.57e-09 | 24 |
pro-B cell | 5.57e-09 | 24 |
oligodendrocyte | 1.48e-07 | 7 |
macroglial cell | 1.48e-07 | 7 |
astrocyte | 1.48e-07 | 7 |
oligodendrocyte precursor cell | 1.48e-07 | 7 |
B cell | 1.67e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neural plate | 1.49e-10 | 82 |
presumptive neural plate | 1.49e-10 | 82 |
neurectoderm | 7.77e-10 | 86 |
neural tube | 1.46e-09 | 56 |
neural rod | 1.46e-09 | 56 |
future spinal cord | 1.46e-09 | 56 |
neural keel | 1.46e-09 | 56 |
ecto-epithelium | 2.90e-08 | 104 |
brain grey matter | 3.27e-08 | 34 |
gray matter | 3.27e-08 | 34 |
cerebral cortex | 6.42e-08 | 25 |
pallium | 6.42e-08 | 25 |
regional part of nervous system | 1.09e-07 | 53 |
regional part of brain | 1.09e-07 | 53 |
central nervous system | 2.94e-07 | 81 |
nervous system | 4.96e-07 | 89 |
dorsal plus ventral thalamus | 5.51e-07 | 2 |
thalamic complex | 5.51e-07 | 2 |
locus ceruleus | 7.22e-07 | 2 |
brainstem nucleus | 7.22e-07 | 2 |
hindbrain nucleus | 7.22e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.10e-08 | 10 |