FFCP PHASE1:Hg19::chr6:28852480..28852486,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:28852480..28852486,- to FFCP PHASE1:Hg19::chr6:28852480..28852486,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:28852480..28852486,- | |||
|coexpression_cluster_id=C3683 | |||
|description=CAGE_peak_at_chr6:28852480..28852486,- | |||
|id=chr6:28852480..28852486,- | |||
|ontology_enrichment_celltype=CL:0000037!1.22e-30!172;CL:0000566!1.22e-30!172;CL:0000084!1.09e-28!25;CL:0000827!1.09e-28!25;CL:0000988!1.33e-28!182;CL:0002032!2.84e-27!165;CL:0000837!2.84e-27!165;CL:0000791!2.67e-24!18;CL:0000789!2.67e-24!18;CL:0002420!2.67e-24!18;CL:0002419!2.67e-24!18;CL:0000790!2.67e-24!18;CL:0000738!3.41e-24!140;CL:0000542!8.20e-24!53;CL:0000051!8.20e-24!53;CL:0000838!3.87e-23!52;CL:0002031!4.74e-20!124;CL:0002087!6.18e-20!119;CL:0000625!2.46e-15!11;CL:0000624!3.66e-09!6;CL:0000763!2.15e-08!112;CL:0000049!2.15e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.56e-53;18!CL:0000789;3.56e-53;18!CL:0002419;3.56e-53;18!CL:0000084;2.20e-50;25!CL:0000625;1.21e-32;11!CL:0000624;7.80e-19;6!CL:0000542;3.99e-18;53!CL:0000623;4.39e-11;3!CL:0000898;3.59e-10;3!CL:0002087;3.03e-08;104!CL:0000815;4.08e-07;2!CL:0000792;4.08e-07;2!CL:0002677;4.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.58e-53,18;CL:0000789,2.58e-53,18;CL:0002420,2.58e-53,18;CL:0002419,2.58e-53,18;CL:0000790,2.58e-53,18;CL:0000084,2.05e-50,25;CL:0000827,2.05e-50,25;CL:0000838,2.81e-34,52;CL:0000542,1.70e-33,53;CL:0000051,1.70e-33,53;CL:0000625,7.90e-33,11;CL:0002087,4.42e-22,115;CL:0000037,4.54e-22,168;CL:0000988,1.08e-21,177;CL:0000738,1.30e-21,136;CL:0002032,2.86e-19,161;CL:0000837,2.86e-19,161;CL:0000624,8.72e-19,6;CL:0002031,7.17e-18,120;CL:0000623,4.62e-11,3;CL:0000825,4.62e-11,3;CL:0000898,3.27e-10,3;CL:0000893,5.47e-08,2;CL:0002489,5.47e-08,2;CL:0000809,5.47e-08,2;CL:0000808,5.47e-08,2;CL:0000894,5.47e-08,2;CL:0000806,5.47e-08,2;CL:0000807,5.47e-08,2;CL:0000805,5.47e-08,2;CL:0002425,5.47e-08,2;CL:0000815,4.02e-07,2;CL:0000792,4.02e-07,2;CL:0002677,4.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.56e-53;18!CL:0000051;3.99e-18;53!CL:0002425;5.94e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!1.92e-09!51;DOID:0060083!1.92e-09!51;DOID:1240!6.26e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.67e-09!15;UBERON:0000179!7.67e-09!15;UBERON:0000463!7.67e-09!15;UBERON:0002390!1.33e-08!102;UBERON:0003061!1.33e-08!102;UBERON:0002193!1.81e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.84e-09;15!UBERON:0000179;7.84e-09;15!UBERON:0000463;7.84e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.00e-09,15;UBERON:0000179,8.00e-09,15;UBERON:0000463,8.00e-09,15;UBERON:0002370,2.12e-08,4;UBERON:0005058,2.12e-08,4;UBERON:0009113,2.12e-08,4;UBERON:0003295,2.12e-08,4;UBERON:0005562,2.12e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,2.30297638858328,0.928896739896456,0,0,0,0.0774672005803016,0.284338464974843,0.880801318004542,1.10799081706375,1.40381113229099,3.68918480216948,0,0,0,0,0,0.242584061187816,0,0.411167888021826,1.54853185447552,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.68152568894461,0,6.09800287352883,2.35806457649499,5.55124047298675,0.668745981562712,5.86660079940463,8.5220605032252,5.84480185223734,0.445641827540694,1.47302953737419,1.55073726208535,2.43723477388514,0.384273959177026,0.390178042679635,1.47994114143309,0.829050053357545,0,6.82118190545478,4.54819407752512,6.27213142829861,0.679856056185397,6.89796888483458,5.84166657320471,9.1087089127021,3.18565414324097,2.60433381542567,2.85135613334512,1.6563263098555,2.55973222308837,3.74792179657038,3.55165878066025,3.28451198768419,12.2980113367087,5.08136371988664,6.37227377084316,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6853560818542,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2980540620193,11.0337225713079,6.253199670926,11.5508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,2.5885704098234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0,0.411362273086194,1.29694662238543,0,1.58625035258854,0,0,0,0.185803175125719,0,1.4939787103167,0.318852545457645,0,1.53204296105893,0.635020748171649,0,0.842391534340376,4.10822422259746,0,0,0,0.321176150207399,0,3.83261613921294,0.343505344755765,0,0,0,0.19538809540204,0,0,0.270455678475983,8.65987116794332,0,0,0,0,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,1.72318727645497,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,3.44743373241465,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0.225595660617181,0,0,0,2.70192184266644,0,0,0,0,0,0,0.611030144933625,2.07564790076435,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.884612114798832,43.8944384690318,0.414752765588989,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.337017719270924,0.196854963029498,0.169346664131569,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,8.3210479532199,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,1.39991177098451,0.106691729694141,0,0,0,0,0,0.383683113910955,0,0.629063767423586,0,0.169732529954025,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0.9555033757741,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0,0.219881033490858,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18270532516606,2.41167717140561,0.829169439458779,0.103432995861895,0,0,0.516711278688049,8.00763814416567,0,0.0636471582781649,0,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,2.30297638858328,0.928896739896456,0,0,0,0.0774672005803016,0.284338464974843,0.880801318004542,1.10799081706375,1.40381113229099,3.68918480216948,0,0,0,0,0,0.242584061187816,0,0.411167888021826,1.54853185447552,0,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.68152568894461,0,6.09800287352883,2.35806457649499,5.55124047298675,0.668745981562712,5.86660079940463,8.5220605032252,5.84480185223734,0.445641827540694,1.47302953737419,1.55073726208535,2.43723477388514,0.384273959177026,0.390178042679635,1.47994114143309,0.829050053357545,0,6.82118190545478,4.54819407752512,6.27213142829861,0.679856056185397,6.89796888483458,5.84166657320471,9.1087089127021,3.18565414324097,2.60433381542567,2.85135613334512,1.6563263098555,2.55973222308837,3.74792179657038,3.55165878066025,3.28451198768419,12.2980113367087,5.08136371988664,6.37227377084316,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6853560818542,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.6312121671319,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2980540620193,11.0337225713079,6.253199670926,11.5508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,2.5885704098234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0,0.411362273086194,1.29694662238543,0,1.58625035258854,0,0,0,0.185803175125719,0,1.4939787103167,0.318852545457645,0,1.53204296105893,0.635020748171649,0,0.842391534340376,4.10822422259746,0,0,0,0.321176150207399,0,3.83261613921294,0.343505344755765,0,0,0,0.19538809540204,0,0,0.270455678475983,8.65987116794332,0,0,0,0,0.445773537109913,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,1.72318727645497,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,3.44743373241465,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0.225595660617181,0,0,0,2.70192184266644,0,0,0,0,0,0,0.611030144933625,2.07564790076435,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.884612114798832,43.8944384690318,0.414752765588989,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.337017719270924,0.196854963029498,0.169346664131569,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,8.3210479532199,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,1.39991177098451,0.106691729694141,0,0,0,0,0,0.383683113910955,0,0.629063767423586,0,0.169732529954025,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,1.15233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0.9555033757741,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0,0.219881033490858,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18270532516606,2.41167717140561,0.829169439458779,0.103432995861895,0,0,0.516711278688049,8.00763814416567,0,0.0636471582781649,0,0.217716747896961,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr6:28852480..28852486,- | |||
}} | }} |
Latest revision as of 23:17, 30 July 2015
Short description: | p@chr6:28852480..28852486, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:28852480..28852486, - |
Coexpression cluster: | C3683_embryonic_NK_Natural_Hodgkin_CD8_mesothelioma_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 8.00e-09 | 15 |
haemolymphatic fluid | 8.00e-09 | 15 |
organism substance | 8.00e-09 | 15 |
thymus | 2.12e-08 | 4 |
hemolymphoid system gland | 2.12e-08 | 4 |
thymic region | 2.12e-08 | 4 |
pharyngeal gland | 2.12e-08 | 4 |
thymus primordium | 2.12e-08 | 4 |