FFCP PHASE1:Hg19::chr6:30737776..30737794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30737776..30737794,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr6:30737776..30737794,+ | |description=CAGE_peak_at_chr6:30737776..30737794,+ | ||
|id=chr6:30737776..30737794,+ | |id=chr6:30737776..30737794,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.12e-47!42;CL:0000860!1.13e-43!45;CL:0002009!3.18e-29!65;CL:0002194!3.19e-28!63;CL:0000576!3.19e-28!63;CL:0000040!3.19e-28!63;CL:0000559!3.19e-28!63;CL:0000557!4.41e-26!71;CL:0000839!1.24e-24!70;CL:0000766!4.42e-22!76;CL:0000763!1.16e-13!112;CL:0000049!1.16e-13!112;CL:0002087!2.28e-12!119;CL:0002031!1.30e-11!124;CL:0000738!2.92e-10!140;CL:0002621!1.38e-08!3;CL:0002320!1.65e-07!365;CL:0000134!2.31e-07!358;CL:0000037!5.23e-07!172;CL:0000566!5.23e-07!172;CL:0002032!5.78e-07!165;CL:0000837!5.78e-07!165;CL:0000048!6.08e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.12e-47!42;CL:0000860!1.13e-43!45;CL:0002009!3.18e-29!65;CL:0002194!3.19e-28!63;CL:0000576!3.19e-28!63;CL:0000040!3.19e-28!63;CL:0000559!3.19e-28!63;CL:0000557!4.41e-26!71;CL:0000839!1.24e-24!70;CL:0000766!4.42e-22!76;CL:0000763!1.16e-13!112;CL:0000049!1.16e-13!112;CL:0002087!2.28e-12!119;CL:0002031!1.30e-11!124;CL:0000738!2.92e-10!140;CL:0002621!1.38e-08!3;CL:0002320!1.65e-07!365;CL:0000134!2.31e-07!358;CL:0000037!5.23e-07!172;CL:0000566!5.23e-07!172;CL:0002032!5.78e-07!165;CL:0000837!5.78e-07!165;CL:0000048!6.08e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.70e-109;33!CL:0002057;6.70e-109;33!CL:0000473;3.57e-74;39!CL:0000234;3.57e-74;39!CL:0000576;5.58e-50;48!CL:0000766;1.20e-26;69!CL:0002087;6.49e-14;104!CL:0000763;1.72e-13;100!CL:0000738;6.76e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.58e-93,42;CL:0002057,1.58e-93,42;CL:0000473,2.15e-81,48;CL:0000234,2.15e-81,48;CL:0002194,2.12e-64,59;CL:0000576,2.12e-64,59;CL:0000040,2.12e-64,59;CL:0000559,2.12e-64,59;CL:0002009,3.31e-62,61;CL:0000839,2.71e-57,66;CL:0000557,2.13e-56,67;CL:0000766,2.76e-52,72;CL:0000763,8.59e-34,108;CL:0000049,8.59e-34,108;CL:0002087,1.59e-31,115;CL:0002031,4.56e-30,120;CL:0000738,4.12e-26,136;CL:0002032,1.73e-21,161;CL:0000837,1.73e-21,161;CL:0000037,1.94e-20,168;CL:0000988,3.29e-19,177;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-67;42!CL:0000049;1.05e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.98e-22!80;UBERON:0001474!1.19e-21!86;UBERON:0004765!6.37e-20!101;UBERON:0001434!6.37e-20!101;UBERON:0002193!3.76e-17!112;UBERON:0002390!5.46e-17!102;UBERON:0003061!5.46e-17!102;UBERON:0002405!1.27e-16!115;UBERON:0002204!3.13e-11!167;UBERON:0001949!1.38e-08!3;UBERON:0003081!1.69e-07!216;UBERON:0002384!5.39e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!2.98e-22!80;UBERON:0001474!1.19e-21!86;UBERON:0004765!6.37e-20!101;UBERON:0001434!6.37e-20!101;UBERON:0002193!3.76e-17!112;UBERON:0002390!5.46e-17!102;UBERON:0003061!5.46e-17!102;UBERON:0002405!1.27e-16!115;UBERON:0002204!3.13e-11!167;UBERON:0001949!1.38e-08!3;UBERON:0003081!1.69e-07!216;UBERON:0002384!5.39e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.91e-09;1!UBERON:0009842;9.91e-09;1!UBERON:0003704;9.91e-09;1!UBERON:0001171;9.91e-09;1!UBERON:0001172;9.91e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-49,76;UBERON:0001474,1.52e-45,82;UBERON:0004765,3.25e-41,90;UBERON:0002405,8.82e-40,93;UBERON:0002390,1.39e-37,98;UBERON:0003061,1.39e-37,98;UBERON:0001434,9.13e-37,100;UBERON:0002193,8.59e-34,108;UBERON:0002204,1.39e-20,167;UBERON:0003081,5.97e-18,203;UBERON:0000926,3.80e-10,315;UBERON:0004120,3.80e-10,315;UBERON:0006603,3.80e-10,315;UBERON:0002384,5.43e-10,371;UBERON:0001282,9.17e-09,1;UBERON:0009842,9.17e-09,1;UBERON:0003704,9.17e-09,1;UBERON:0001171,9.17e-09,1;UBERON:0001172,9.17e-09,1 | |||
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| ||
|short_description=p@chr6:30737776..30737794,+ | |short_description=p@chr6:30737776..30737794,+ | ||
}} | }} |
Latest revision as of 23:42, 30 July 2015
Short description: | p@chr6:30737776..30737794, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:30737776..30737794, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.58e-93 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-93 | 42 |
defensive cell | 2.15e-81 | 48 |
phagocyte | 2.15e-81 | 48 |
monopoietic cell | 2.12e-64 | 59 |
monocyte | 2.12e-64 | 59 |
monoblast | 2.12e-64 | 59 |
promonocyte | 2.12e-64 | 59 |
macrophage dendritic cell progenitor | 3.31e-62 | 61 |
myeloid lineage restricted progenitor cell | 2.71e-57 | 66 |
granulocyte monocyte progenitor cell | 2.13e-56 | 67 |
myeloid leukocyte | 2.76e-52 | 72 |
myeloid cell | 8.59e-34 | 108 |
common myeloid progenitor | 8.59e-34 | 108 |
nongranular leukocyte | 1.59e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 4.56e-30 | 120 |
leukocyte | 4.12e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.73e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-21 | 161 |
hematopoietic stem cell | 1.94e-20 | 168 |
hematopoietic cell | 3.29e-19 | 177 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-49 | 76 |
bone element | 1.52e-45 | 82 |
skeletal element | 3.25e-41 | 90 |
immune system | 8.82e-40 | 93 |
hematopoietic system | 1.39e-37 | 98 |
blood island | 1.39e-37 | 98 |
skeletal system | 9.13e-37 | 100 |
hemolymphoid system | 8.59e-34 | 108 |
musculoskeletal system | 1.39e-20 | 167 |
lateral plate mesoderm | 5.97e-18 | 203 |
mesoderm | 3.80e-10 | 315 |
mesoderm-derived structure | 3.80e-10 | 315 |
presumptive mesoderm | 3.80e-10 | 315 |
connective tissue | 5.43e-10 | 371 |
intralobular bile duct | 9.17e-09 | 1 |
acinus | 9.17e-09 | 1 |
intrahepatic bile duct | 9.17e-09 | 1 |
portal lobule | 9.17e-09 | 1 |
hepatic acinus | 9.17e-09 | 1 |