FFCP PHASE1:Hg19::chr6:34213226..34213258,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:34213226..34213258,+ | |||
|coexpression_cluster_id=C4595 | |||
|description=CAGE_peak_at_chr6:34213226..34213258,+ | |||
|id=chr6:34213226..34213258,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.86e-25!679;CL:0000004!1.86e-25!679;CL:0000255!1.86e-25!679;CL:0000012!4.65e-25!682;CL:0002321!6.16e-22!248;CL:0000220!4.39e-21!246;CL:0000144!2.07e-17!625;CL:0000003!2.52e-16!722;CL:0000222!4.69e-16!119;CL:0000066!5.29e-15!254;CL:0002371!2.96e-13!591;CL:0000183!2.61e-12!59;CL:0000055!3.53e-12!180;CL:0000393!1.19e-11!60;CL:0000211!1.19e-11!60;CL:0000187!1.11e-10!54;CL:0000680!3.36e-10!57;CL:0000056!3.36e-10!57;CL:0000355!3.36e-10!57;CL:0000071!8.06e-09!18;CL:0002546!8.06e-09!18;CL:0000115!9.28e-09!35;CL:0000192!2.50e-08!42;CL:0000514!2.50e-08!42;CL:0002139!4.24e-08!24;CL:0002078!2.14e-07!44;CL:1000449!2.48e-07!16;CL:0000063!2.78e-07!578;CL:0000076!7.95e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.53e-09;18!CL:0002139;1.21e-08;24!CL:0000115;2.02e-08;36!CL:1000449;4.10e-08;15!CL:0002681;5.07e-07;12!CL:0002584;5.07e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.99e-22,250;CL:0000222,1.41e-17,121;CL:0000066,1.04e-13,253;CL:0000393,4.41e-12,61;CL:0000211,4.41e-12,61;CL:0000187,8.25e-11,55;CL:0000680,3.53e-10,58;CL:0000056,3.53e-10,58;CL:0000355,3.53e-10,58;CL:0000115,4.00e-10,36;CL:0000071,1.58e-09,18;CL:0002546,1.58e-09,18;CL:0002078,5.92e-09,45;CL:0002139,1.89e-08,24;CL:0000192,1.90e-08,43;CL:0000514,1.90e-08,43;CL:1000449,3.14e-08,15;CL:0000213,2.37e-07,58;CL:0000215,2.37e-07,58;CL:0000076,2.56e-07,63;CL:0002681,2.94e-07,12;CL:0002584,2.94e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.53e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.38e-13!118;UBERON:0000490!6.44e-13!138;UBERON:0005256!4.89e-12!143;UBERON:0000055!1.16e-11!69;UBERON:0001981!1.99e-11!60;UBERON:0007500!1.99e-11!60;UBERON:0004537!1.99e-11!60;UBERON:0006965!1.99e-11!60;UBERON:0002049!8.69e-11!79;UBERON:0007798!8.69e-11!79;UBERON:0004290!1.20e-10!70;UBERON:0001637!2.27e-10!42;UBERON:0003509!2.27e-10!42;UBERON:0004572!2.27e-10!42;UBERON:0000914!2.69e-10!83;UBERON:0002329!2.69e-10!83;UBERON:0003077!2.69e-10!83;UBERON:0003059!2.69e-10!83;UBERON:0007282!2.69e-10!83;UBERON:0009618!2.69e-10!83;UBERON:0007285!2.69e-10!83;UBERON:0000486!2.24e-09!82;UBERON:0004872!4.18e-09!84;UBERON:0001986!8.06e-09!18;UBERON:0004638!8.06e-09!18;UBERON:0004852!8.06e-09!18;UBERON:0003104!1.05e-08!238;UBERON:0009142!1.05e-08!238;UBERON:0001134!3.53e-08!61;UBERON:0002036!3.53e-08!61;UBERON:0003082!3.53e-08!61;UBERON:0000487!5.46e-08!22;UBERON:0002100!5.50e-08!216;UBERON:0004573!1.34e-07!33;UBERON:0004571!1.34e-07!33;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0000926!1.75e-07!448;UBERON:0004120!1.75e-07!448;UBERON:0006603!1.75e-07!448;UBERON:0004211!2.48e-07!16;UBERON:0001285!2.48e-07!16;UBERON:0007684!2.48e-07!16;UBERON:0003220!2.48e-07!16;UBERON:0004208!2.48e-07!16;UBERON:0006555!8.48e-07!17;UBERON:0005103!8.48e-07!17;UBERON:0000083!8.48e-07!17;UBERON:0009201!8.48e-07!17;UBERON:0004819!8.48e-07!17;UBERON:0006553!8.48e-07!17;UBERON:0003074!8.48e-07!17;UBERON:0003060!8.48e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;6.20e-10;74!UBERON:0004638;1.53e-09;18!UBERON:0001986;1.53e-09;18!UBERON:0004852;1.53e-09;18!UBERON:0007500;8.49e-09;56!UBERON:0001981;8.49e-09;56!UBERON:0004537;8.49e-09;56!UBERON:0000487;9.00e-09;22!UBERON:0001637;2.41e-08;42!UBERON:0003509;2.41e-08;42!UBERON:0004572;2.41e-08;42!UBERON:0006555;4.10e-08;15!UBERON:0004819;4.10e-08;15!UBERON:0001285;4.10e-08;15!UBERON:0007684;4.10e-08;15!UBERON:0004573;1.28e-07;33!UBERON:0004571;1.28e-07;33!UBERON:0000490;1.42e-07;33!UBERON:0000353;3.09e-07;15!UBERON:0000055;3.18e-07;65!UBERON:0001225;5.07e-07;12!UBERON:0008987;5.07e-07;12!UBERON:0000025;8.24e-07;93 | |||
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| |||
|short_description=p@chr6:34213226..34213258,+ | |||
}} |
Latest revision as of 00:52, 31 July 2015
Short description: | p@chr6:34213226..34213258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:34213226..34213258, + |
Coexpression cluster: | C4595_iPS_Fibroblast_Alveolar_meningioma_Endothelial_choriocarcinoma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.99e-22 | 250 |
mesodermal cell | 1.41e-17 | 121 |
epithelial cell | 1.04e-13 | 253 |
electrically responsive cell | 4.41e-12 | 61 |
electrically active cell | 4.41e-12 | 61 |
muscle cell | 8.25e-11 | 55 |
muscle precursor cell | 3.53e-10 | 58 |
myoblast | 3.53e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.53e-10 | 58 |
endothelial cell | 4.00e-10 | 36 |
blood vessel endothelial cell | 1.58e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.58e-09 | 18 |
meso-epithelial cell | 5.92e-09 | 45 |
endothelial cell of vascular tree | 1.89e-08 | 24 |
smooth muscle cell | 1.90e-08 | 43 |
smooth muscle myoblast | 1.90e-08 | 43 |
epithelial cell of nephron | 3.14e-08 | 15 |
lining cell | 2.37e-07 | 58 |
barrier cell | 2.37e-07 | 58 |
squamous epithelial cell | 2.56e-07 | 63 |
kidney cortical cell | 2.94e-07 | 12 |
renal cortical epithelial cell | 2.94e-07 | 12 |