FFCP PHASE1:Hg19::chr6:68596984..68596998,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:68596984..68596998,- | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr6:68596984..68596998,- | |description=CAGE_peak_at_chr6:68596984..68596998,- | ||
|id=chr6:68596984..68596998,- | |id=chr6:68596984..68596998,- | ||
|ontology_enrichment_celltype=CL:0000763!4.93e-20!112;CL:0000049!4.93e-20!112;CL:0000054!1.62e-17!2;CL:0000137!1.62e-17!2;CL:0000092!1.62e-17!2;CL:0002032!1.33e-12!165;CL:0000837!1.33e-12!165;CL:0000037!5.83e-12!172;CL:0000566!5.83e-12!172;CL:0000988!3.96e-11!182 | |ontology_enrichment_celltype=CL:0000763!4.93e-20!112;CL:0000049!4.93e-20!112;CL:0000054!1.62e-17!2;CL:0000137!1.62e-17!2;CL:0000092!1.62e-17!2;CL:0002032!1.33e-12!165;CL:0000837!1.33e-12!165;CL:0000037!5.83e-12!172;CL:0000566!5.83e-12!172;CL:0000988!3.96e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.82e-11;2!CL:0000137;1.82e-11;2!CL:0000092;1.82e-11;2!CL:0000763;3.77e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000054,1.82e-11,2;CL:0000137,1.82e-11,2;CL:0000092,1.82e-11,2;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000049;1.55e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.01e-63!31;DOID:1240!4.29e-50!39;DOID:1036!2.93e-49!8;DOID:2531!3.33e-48!51;DOID:0060083!3.33e-48!51;DOID:0050686!8.21e-18!137;DOID:200!1.62e-17!2;DOID:4305!1.62e-17!2;DOID:162!2.61e-14!235;DOID:14566!6.20e-14!239;DOID:0060085!7.98e-10!1;DOID:3165!7.98e-10!1;DOID:0060121!7.98e-10!1;DOID:2438!7.98e-10!1;DOID:4418!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.06e-61;8!DOID:8692;1.46e-51;31!DOID:1240;3.27e-33;39!DOID:2531;1.09e-26;51!DOID:0060083;1.09e-26;51!DOID:0060085;1.53e-21;1!DOID:3165;1.53e-21;1!DOID:0060121;1.53e-21;1!DOID:2438;1.53e-21;1!DOID:4418;1.53e-21;1!DOID:200;1.82e-11;2!DOID:4305;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.75e-61,8;DOID:8692,5.84e-51,31;DOID:1240,1.76e-40,39;DOID:2531,2.84e-38,51;DOID:0060083,2.84e-38,51;DOID:0060085,1.53e-21,1;DOID:3165,1.53e-21,1;DOID:0060121,1.53e-21,1;DOID:2438,1.53e-21,1;DOID:4418,1.53e-21,1;DOID:0050686,6.15e-14,137;DOID:200,1.82e-11,2;DOID:4305,1.82e-11,2;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.00e-09!1;UBERON:0009842!3.00e-09!1;UBERON:0003704!3.00e-09!1;UBERON:0001171!3.00e-09!1;UBERON:0001172!3.00e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr6:68596984..68596998,- | |short_description=p@chr6:68596984..68596998,- | ||
}} | }} |
Latest revision as of 02:47, 31 July 2015
Short description: | p@chr6:68596984..68596998, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:68596984..68596998, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
bone matrix secreting cell | 1.82e-11 | 2 |
osteocyte | 1.82e-11 | 2 |
osteoclast | 1.82e-11 | 2 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.75e-61 | 8 |
myeloid leukemia | 5.84e-51 | 31 |
leukemia | 1.76e-40 | 39 |
hematologic cancer | 2.84e-38 | 51 |
immune system cancer | 2.84e-38 | 51 |
organ system benign neoplasm | 1.53e-21 | 1 |
skin benign neoplasm | 1.53e-21 | 1 |
integumentary system benign neoplasm | 1.53e-21 | 1 |
dermis tumor | 1.53e-21 | 1 |
cutaneous fibrous histiocytoma | 1.53e-21 | 1 |
organ system cancer | 6.15e-14 | 137 |
giant cell tumor | 1.82e-11 | 2 |
bone giant cell tumor | 1.82e-11 | 2 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |