FFCP PHASE1:Hg19::chr8:42033546..42033576,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033546..42033576,- | |||
|coexpression_cluster_id=C471 | |coexpression_cluster_id=C471 | ||
|description=CAGE_peak_at_chr8:42033546..42033576,- | |description=CAGE_peak_at_chr8:42033546..42033576,- | ||
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|ontology_enrichment_celltype=CL:0000183!3.93e-15!59;CL:0000187!1.21e-14!54;CL:0000680!2.48e-14!57;CL:0000056!2.48e-14!57;CL:0000355!2.48e-14!57;CL:0000192!3.36e-13!42;CL:0000514!3.36e-13!42;CL:0000055!3.42e-12!180;CL:0000393!6.81e-12!60;CL:0000211!6.81e-12!60;CL:0000359!1.50e-10!32;CL:0000222!1.68e-07!119 | |ontology_enrichment_celltype=CL:0000183!3.93e-15!59;CL:0000187!1.21e-14!54;CL:0000680!2.48e-14!57;CL:0000056!2.48e-14!57;CL:0000355!2.48e-14!57;CL:0000192!3.36e-13!42;CL:0000514!3.36e-13!42;CL:0000055!3.42e-12!180;CL:0000393!6.81e-12!60;CL:0000211!6.81e-12!60;CL:0000359!1.50e-10!32;CL:0000222!1.68e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.69e-14;32!CL:0002595;1.60e-12;5!CL:0000192;9.07e-11;43!CL:1000306;4.28e-09;4!CL:0002547;4.28e-09;4!CL:0002539;5.61e-09;10!CL:0002593;6.85e-09;2!CL:0002195;5.77e-08;2!CL:0002571;5.77e-08;2 | |ontology_enrichment_celltype_v019=CL:0000359;3.69e-14;32!CL:0002595;1.60e-12;5!CL:0000192;9.07e-11;43!CL:1000306;4.28e-09;4!CL:0002547;4.28e-09;4!CL:0002539;5.61e-09;10!CL:0002593;6.85e-09;2!CL:0002195;5.77e-08;2!CL:0002571;5.77e-08;2 | ||
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|ontology_enrichment_development_v019=CL:0000514;9.07e-11;43 | |ontology_enrichment_development_v019=CL:0000514;9.07e-11;43 | ||
|ontology_enrichment_disease=DOID:2394!2.53e-07!14 | |ontology_enrichment_disease=DOID:2394!2.53e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.22e-13;3!DOID:127;7.22e-13;3!DOID:2394;2.87e-12;14!DOID:0060072;9.57e-10;4 | |ontology_enrichment_disease_v019=DOID:0060084;7.22e-13;3!DOID:127;7.22e-13;3!DOID:2394;2.87e-12;14!DOID:0060072;9.57e-10;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.56e-13,3;DOID:127,7.56e-13,3;DOID:2394,2.03e-12,14;DOID:0060072,9.90e-10,4 | |||
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| ||
|short_description=p@chr8:42033546..42033576,- | |short_description=p@chr8:42033546..42033576,- | ||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033546..42033576, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033546..42033576, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.36e-14 | 32 |
smooth muscle cell | 1.48e-13 | 43 |
smooth muscle myoblast | 1.48e-13 | 43 |
smooth muscle cell of the subclavian artery | 1.08e-12 | 5 |
muscle precursor cell | 2.72e-12 | 58 |
myoblast | 2.72e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.72e-12 | 58 |
muscle cell | 1.75e-11 | 55 |
electrically responsive cell | 5.11e-10 | 61 |
electrically active cell | 5.11e-10 | 61 |
fibroblast of tunica adventitia of artery | 4.13e-09 | 4 |
fibroblast of the aortic adventitia | 4.13e-09 | 4 |
aortic smooth muscle cell | 7.18e-09 | 10 |
smooth muscle cell of the internal thoracic artery | 7.58e-09 | 2 |
mesodermal cell | 3.88e-08 | 121 |
hepatic stem cell | 8.89e-08 | 2 |
hepatic mesenchymal stem cell | 8.89e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.56e-13 | 3 |
leiomyoma | 7.56e-13 | 3 |
ovarian cancer | 2.03e-12 | 14 |
benign neoplasm | 9.90e-10 | 4 |