FFCP PHASE1:Hg19::chr8:62626662..62626685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:62626662..62626685,- | |||
|description=CAGE_peak_at_chr8:62626662..62626685,- | |description=CAGE_peak_at_chr8:62626662..62626685,- | ||
|id=chr8:62626662..62626685,- | |id=chr8:62626662..62626685,- | ||
|ontology_enrichment_celltype=CL:0000860;2.66e-30;33!CL:0002057;2.66e-30;33!CL:0000473;2.91e-24;39!CL:0000234;2.91e-24;39!CL:0000576;6.26e-13;48!CL:0000766;8.26e-09;69 | |ontology_enrichment_celltype=CL:0000860!2.83e-09!45;CL:0002057!3.25e-09!42;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0002009!2.54e-08!65;CL:0000057!2.66e-08!75;CL:0000012!4.94e-07!682 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.66e-30;33!CL:0002057;2.66e-30;33!CL:0000473;2.91e-24;39!CL:0000234;2.91e-24;39!CL:0000576;6.26e-13;48!CL:0000766;8.26e-09;69 | ||
|ontology_enrichment_disease=DOID:2394;4.80e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000860,1.94e-25,42;CL:0002057,1.94e-25,42;CL:0000473,1.48e-24,48;CL:0000234,1.48e-24,48;CL:0002194,3.69e-19,59;CL:0000576,3.69e-19,59;CL:0000040,3.69e-19,59;CL:0000559,3.69e-19,59;CL:0002009,3.11e-18,61;CL:0000766,7.95e-18,72;CL:0000839,3.60e-16,66;CL:0000557,8.52e-16,67;CL:0000048,1.71e-10,427;CL:0000034,2.05e-10,441;CL:0000723,4.90e-10,433;CL:0000763,8.71e-09,108;CL:0000049,8.71e-09,108;CL:0000134,2.89e-08,354;CL:0002320,3.70e-08,361 | ||
|ontology_enrichment_uberon=UBERON:0000992;1.44e-08;13!UBERON:0002119;7.77e-07;4 | |ontology_enrichment_development_v019=CL:0002057;1.35e-19;42 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.80e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.77e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000480!2.11e-08!626;UBERON:0000467!2.17e-08!625;UBERON:0002204!9.59e-08!167;UBERON:0000062!1.29e-07!511;UBERON:0000468!2.79e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.44e-08;13!UBERON:0002119;7.77e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,3.39e-14,100;UBERON:0001474,3.71e-14,82;UBERON:0002371,6.97e-14,76;UBERON:0004765,7.80e-14,90;UBERON:0002204,1.42e-13,167;UBERON:0002405,2.01e-11,93;UBERON:0000992,4.10e-09,13;UBERON:0002390,7.55e-09,98;UBERON:0003061,7.55e-09,98;UBERON:0002193,1.29e-08,108;UBERON:0002384,2.58e-08,371;UBERON:0002119,1.72e-07,4 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,1.04474251279935,0,0,0.436882744260345,0,0.618831764800233,0.331397375727916,2.01697543935533,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0.164201178899891,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0.647787332037959,0,0.726991193897824,2.26725566213286,1.69808842831471,2.55671940596253,2.46700732813095,3.71647645074124,3.45230870786581,3.33008918487831,2.12834006899727,3.7922024881028,1.93645405075148,0,1.88242339542605,2.45615535052061,1.79778787556068,0.306083892370903,1.60464513538047,2.55734850319616,1.9791078011203,4.3882004676759,1.70489900213078,1.7412554317715,2.8369261234557,3.11411124497787,4.01997864410789,4.17186334736161,4.12658804939722,1.21079900526674,2.57794345191295,3.48108626184973,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,2.01210257911091,0,0,0,0.289693037921647,0,0.973269740605272,0.472674085820339,0.665188192387692,0.87834785693126,0.0654895377488563,0,0,0.97364218096405,0.696518949197069,1.32957960518865,0.238490624305342,0.571994910780128,0.74291500265913,0.79504962946682,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.208994966536811,1.03366703667732,1.77883131343355,0.66944122552934,0.402829317109147,0,0,0,0.81014194788176,0.267899184852239,1.34717623575702,0.563057402416611,0,0,0.366403487860815,1.31780417436063,7.75560528296651,0.436094052142534,0,0.506522046658319,1.85372853138506,0,0.709336764396714,0.560677600142307,0,0.49333509683432,1.55605517699883,1.0776853765575,1.14423332179421,0.302714855289863,3.45705554687999,0.70296429550139,0.936480230490962,1.1409436430889,1.19558944441441,0.469737994575059,0.971237666208789,0.280901613404497,1.42907919878425,0.245668634623536,2.06651562351531,0,0.741800787835671,0,0,1.17835279767846,0.125118519871964,1.6623846929051,0,1.22595118319608,0.600952235626387,0.113432183160021,0.89694817844431,0.213557388818567,0.847727604638247,0.300091096084402,0.618315175430633,1.03056216018252,0.558350568994769,2.36286865137773,0.584622030967192,1.00973509697646,0.828449087780694,0.646584227275248,0.355009592516614,0.604512589365842,0,0.386521706326594,1.36373060295417,1.14721838155602,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,0.928735856063958,0,0.828147600278907,0.337169380156203,0.241011029883482,0.661763836394364,0,0.237270619111097,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.686271241194102,0.109750285408626,0,0.502644862058154,0.370353780634118,0.977424915930974,0,1.44331342025273,0.463721619900307,0.469634776943287,0.144366447761074,0,0.761016608938393,0.790204397959275,0,0.738651018262192,1.17002132569619,1.33768046059855,0,1.17587489739202,0.283550194484773,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0.4400297149257,0.517086863031111,0,0,0.531876233169741,0,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.602878754119172,2.61460037580088,1.19967589418468,0,0,0,0.239624855491583,0,1.42636905040718,0.868687840005475,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0.736148950314839,1.00034104211935,0.271265023699736,0.831883446123229,0.356857977594324,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0.737476674166813,1.21637060255316,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0,1.02341449813341,0.804269605718038,1.48418066444991,0.462629081407967,0.887808626565635,0.657017248110473,0,1.04589340613963,0.362578348774867,0.601519410909855,0.184161977871793,0.34444334449382,0.910455840033585,0.786746489756545,0,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0.330037999682352,0.574265537996172,0,0,0.096670718292122,0.616194468458578,0.614014698904518,0.689182862422653,2.25582514223375,0.870100163485371,1.10794615640931,0.0890320356467374,0.661139661443912,0.960950336825531,2.4246415373971,0.708104465988849,0,0.94443704049192,0,0.924100740528266,0.532306030317022,0,0,1.28812398067792,1.116475108079,0,0.762520775695299,0,0.42793898803392,0,2.35484592059769,0.899362287916574,1.09814811894422,1.06031162111118,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,1.22849920267187,0.424216295861138,0,0,0,0,0.578775534266688,0,0.405820753925408,0.6196469961995,0.281695602532241,0.573645408816206,0.294747123039363,1.07001315444375,1.06428319221179,0.211107635297664,0.658589785919804,0,0,0.384888450902048,0,0,0.470719003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| ||
|short_description=p@chr8:62626662..62626685,- | |short_description=p@chr8:62626662..62626685,- | ||
}} | }} |
Latest revision as of 19:16, 31 July 2015
Short description: | p@chr8:62626662..62626685, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:62626662..62626685, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.94e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-25 | 42 |
defensive cell | 1.48e-24 | 48 |
phagocyte | 1.48e-24 | 48 |
monopoietic cell | 3.69e-19 | 59 |
monocyte | 3.69e-19 | 59 |
monoblast | 3.69e-19 | 59 |
promonocyte | 3.69e-19 | 59 |
macrophage dendritic cell progenitor | 3.11e-18 | 61 |
myeloid leukocyte | 7.95e-18 | 72 |
myeloid lineage restricted progenitor cell | 3.60e-16 | 66 |
granulocyte monocyte progenitor cell | 8.52e-16 | 67 |
multi fate stem cell | 1.71e-10 | 427 |
stem cell | 2.05e-10 | 441 |
somatic stem cell | 4.90e-10 | 433 |
myeloid cell | 8.71e-09 | 108 |
common myeloid progenitor | 8.71e-09 | 108 |
mesenchymal cell | 2.89e-08 | 354 |
connective tissue cell | 3.70e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 3.39e-14 | 100 |
bone element | 3.71e-14 | 82 |
bone marrow | 6.97e-14 | 76 |
skeletal element | 7.80e-14 | 90 |
musculoskeletal system | 1.42e-13 | 167 |
immune system | 2.01e-11 | 93 |
female gonad | 4.10e-09 | 13 |
hematopoietic system | 7.55e-09 | 98 |
blood island | 7.55e-09 | 98 |
hemolymphoid system | 1.29e-08 | 108 |
connective tissue | 2.58e-08 | 371 |
left ovary | 1.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.77e-08 | 14 |