FFCP PHASE1:Mm9::chr14:119720863..119720874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:119720863..119720874,+ | |||
|description=CAGE_peak_at_chr14:119720863..119720874,+ | |description=CAGE_peak_at_chr14:119720863..119720874,+ | ||
|id=chr14:119720863..119720874,+ | |id=chr14:119720863..119720874,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.80e-11!10;UBERON:0000411!2.80e-11!10;UBERON:0001950!2.80e-11!10;UBERON:0002048!5.12e-11!14;UBERON:0000117!5.12e-11!14;UBERON:0000171!5.12e-11!14;UBERON:0000170!5.12e-11!14;UBERON:0005597!5.12e-11!14;UBERON:0000118!5.12e-11!14;UBERON:0000955!5.39e-09!50;UBERON:0006238!5.39e-09!50;UBERON:0005153!1.87e-08!17;UBERON:0005178!1.87e-08!17;UBERON:0005181!1.87e-08!17;UBERON:0002224!1.87e-08!17;UBERON:0000915!1.87e-08!17;UBERON:0008947!1.87e-08!17;UBERON:0003258!1.87e-08!17;UBERON:0002616!2.43e-08!49;UBERON:0002619!4.12e-08!17;UBERON:0002020!1.23e-07!34;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0003080!1.35e-07!40;UBERON:0001049!1.74e-07!52;UBERON:0005068!1.74e-07!52;UBERON:0006241!1.74e-07!52;UBERON:0007135!1.74e-07!52;UBERON:0000033!3.85e-07!63;UBERON:0000956!5.06e-07!21;UBERON:0001869!5.06e-07!21;UBERON:0000203!5.06e-07!21;UBERON:0002780!7.18e-07!39;UBERON:0001890!7.18e-07!39;UBERON:0006240!7.18e-07!39 | |ontology_enrichment_uberon=UBERON:0002021!2.80e-11!10;UBERON:0000411!2.80e-11!10;UBERON:0001950!2.80e-11!10;UBERON:0002048!5.12e-11!14;UBERON:0000117!5.12e-11!14;UBERON:0000171!5.12e-11!14;UBERON:0000170!5.12e-11!14;UBERON:0005597!5.12e-11!14;UBERON:0000118!5.12e-11!14;UBERON:0000955!5.39e-09!50;UBERON:0006238!5.39e-09!50;UBERON:0005153!1.87e-08!17;UBERON:0005178!1.87e-08!17;UBERON:0005181!1.87e-08!17;UBERON:0002224!1.87e-08!17;UBERON:0000915!1.87e-08!17;UBERON:0008947!1.87e-08!17;UBERON:0003258!1.87e-08!17;UBERON:0002616!2.43e-08!49;UBERON:0002619!4.12e-08!17;UBERON:0002020!1.23e-07!34;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0003080!1.35e-07!40;UBERON:0001049!1.74e-07!52;UBERON:0005068!1.74e-07!52;UBERON:0006241!1.74e-07!52;UBERON:0007135!1.74e-07!52;UBERON:0000033!3.85e-07!63;UBERON:0000956!5.06e-07!21;UBERON:0001869!5.06e-07!21;UBERON:0000203!5.06e-07!21;UBERON:0002780!7.18e-07!39;UBERON:0001890!7.18e-07!39;UBERON:0006240!7.18e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.18e-43,10;UBERON:0000411,4.18e-43,10;UBERON:0001950,4.18e-43,10;UBERON:0002619,2.44e-25,17;UBERON:0000956,1.73e-20,21;UBERON:0001869,1.73e-20,21;UBERON:0000203,1.73e-20,21;UBERON:0003528,3.85e-19,29;UBERON:0002791,3.85e-19,29;UBERON:0001893,3.85e-19,29;UBERON:0002020,2.79e-16,34;UBERON:0002780,3.76e-14,39;UBERON:0001890,3.76e-14,39;UBERON:0006240,3.76e-14,39;UBERON:0003080,8.68e-14,40;UBERON:0002616,6.12e-12,46;UBERON:0000955,1.12e-11,47;UBERON:0006238,1.12e-11,47;UBERON:0003056,3.49e-11,49;UBERON:0001049,1.63e-10,52;UBERON:0005068,1.63e-10,52;UBERON:0006241,1.63e-10,52;UBERON:0007135,1.63e-10,52;UBERON:0000073,4.15e-10,54;UBERON:0001851,1.03e-09,1;UBERON:0005889,1.03e-09,1;UBERON:0002346,1.86e-08,64;UBERON:0003075,1.86e-08,64;UBERON:0007284,1.86e-08,64;UBERON:0010371,2.37e-07,73;UBERON:0001017,2.37e-07,73;UBERON:0001016,3.85e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,1.37250180845588,0.125654352112864,0.173824320192276,1.27857728665165,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0.696710015581316,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.509235257325564,2.11221223459652,0.502518772325447,0.476087281772027,0.780534591431195,0.630540576424764,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,3.22227665555024,4.01026859407578,3.09335728218638,0,2.2661816921691,0.675022500231806,0.900642406448441,2.26571204492102,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,1.37250180845588,0.125654352112864,0.173824320192276,1.27857728665165,0,0.162241263067758,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0.696710015581316,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.509235257325564,2.11221223459652,0.502518772325447,0.476087281772027,0.780534591431195,0.630540576424764,0.664394068946325,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.493647061806363,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,3.22227665555024,4.01026859407578,3.09335728218638,0,2.2661816921691,0.675022500231806,0.900642406448441,2.26571204492102,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr14:119720863..119720874,+ | |short_description=p@chr14:119720863..119720874,+ | ||
}} | }} |
Latest revision as of 23:46, 3 August 2015
Short description: | p@chr14:119720863..119720874, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:119720863..119720874, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.18e-43 | 10 |
visual cortex | 4.18e-43 | 10 |
neocortex | 4.18e-43 | 10 |
regional part of cerebral cortex | 2.44e-25 | 17 |
cerebral cortex | 1.73e-20 | 21 |
cerebral hemisphere | 1.73e-20 | 21 |
pallium | 1.73e-20 | 21 |
brain grey matter | 3.85e-19 | 29 |
regional part of telencephalon | 3.85e-19 | 29 |
telencephalon | 3.85e-19 | 29 |
gray matter | 2.79e-16 | 34 |
regional part of forebrain | 3.76e-14 | 39 |
forebrain | 3.76e-14 | 39 |
future forebrain | 3.76e-14 | 39 |
anterior neural tube | 8.68e-14 | 40 |
regional part of brain | 6.12e-12 | 46 |
brain | 1.12e-11 | 47 |
future brain | 1.12e-11 | 47 |
pre-chordal neural plate | 3.49e-11 | 49 |
neural tube | 1.63e-10 | 52 |
neural rod | 1.63e-10 | 52 |
future spinal cord | 1.63e-10 | 52 |
neural keel | 1.63e-10 | 52 |
regional part of nervous system | 4.15e-10 | 54 |
cortex | 1.03e-09 | 1 |
zygote cortex | 1.03e-09 | 1 |
neurectoderm | 1.86e-08 | 64 |
neural plate | 1.86e-08 | 64 |
presumptive neural plate | 1.86e-08 | 64 |
ecto-epithelium | 2.37e-07 | 73 |
central nervous system | 2.37e-07 | 73 |
nervous system | 3.85e-07 | 75 |