FFCP PHASE1:Mm9::chr7:20282296..20282318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20282296..20282318,- | |||
|description=CAGE_peak_at_chr7:20282296..20282318,- | |description=CAGE_peak_at_chr7:20282296..20282318,- | ||
|id=chr7:20282296..20282318,- | |id=chr7:20282296..20282318,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.53e-10,5;CL:0002319,5.34e-08,43;CL:0002194,6.60e-08,4;CL:0000766,6.60e-08,4;CL:0000234,6.60e-08,4;CL:0000576,6.60e-08,4;CL:0000235,6.60e-08,4;CL:0000864,6.60e-08,4;CL:0002009,6.60e-08,4;CL:0000040,6.60e-08,4;CL:0000559,6.60e-08,4;CL:0000221,1.01e-07,44;CL:0000133,1.01e-07,44;CL:0002321,3.68e-07,70;CL:0002453,3.71e-07,8;CL:0002092,4.00e-07,3;CL:0002540,4.00e-07,3;CL:0000723,9.82e-07,91;CL:0000048,9.82e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.71e-13!22;UBERON:0007499!6.71e-13!22;UBERON:0006925!6.71e-13!22;UBERON:0009497!6.71e-13!22;UBERON:0000015!6.71e-13!22;UBERON:0002423!6.71e-13!22;UBERON:0006235!6.71e-13!22;UBERON:0008835!6.71e-13!22;UBERON:0003894!6.71e-13!22;UBERON:0004161!6.71e-13!22;UBERON:0008836!6.71e-13!22;UBERON:0002365!2.12e-12!25;UBERON:0002330!2.12e-12!25;UBERON:0009854!7.35e-12!23;UBERON:0009856!7.35e-12!23;UBERON:0000025!1.57e-09!114;UBERON:0004111!4.39e-09!122;UBERON:0001017!6.07e-09!73;UBERON:0005743!6.07e-09!73;UBERON:0004121!7.88e-09!102;UBERON:0000924!7.88e-09!102;UBERON:0006601!7.88e-09!102;UBERON:0000073!1.38e-08!75;UBERON:0001016!1.38e-08!75;UBERON:0005256!4.69e-08!47;UBERON:0003914!6.84e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.99e-24,22;UBERON:0007499,5.99e-24,22;UBERON:0006925,5.99e-24,22;UBERON:0009497,5.99e-24,22;UBERON:0000015,5.99e-24,22;UBERON:0002423,5.99e-24,22;UBERON:0006235,5.99e-24,22;UBERON:0008835,5.99e-24,22;UBERON:0003894,5.99e-24,22;UBERON:0004161,5.99e-24,22;UBERON:0008836,5.99e-24,22;UBERON:0009854,1.11e-22,23;UBERON:0009856,1.11e-22,23;UBERON:0002365,1.16e-22,25;UBERON:0002330,1.16e-22,25;UBERON:0000025,3.34e-11,114;UBERON:0004111,1.18e-10,122;UBERON:0005256,3.27e-10,45;UBERON:0003914,1.45e-09,47;UBERON:0005172,5.65e-09,49;UBERON:0005173,5.65e-09,49;UBERON:0002417,5.65e-09,49;UBERON:0000916,5.65e-09,49;UBERON:0001017,8.79e-08,73;UBERON:0001016,2.02e-07,75;UBERON:0011216,3.51e-07,194;UBERON:0000073,3.63e-07,54 | |||
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| ||
|short_description=p@chr7:20282296..20282318,- | |short_description=p@chr7:20282296..20282318,- | ||
}} | }} |
Latest revision as of 18:25, 4 August 2015
Short description: | p@chr7:20282296..20282318, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282296..20282318, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.53e-10 | 5 |
neural cell | 5.34e-08 | 43 |
monopoietic cell | 6.60e-08 | 4 |
myeloid leukocyte | 6.60e-08 | 4 |
phagocyte | 6.60e-08 | 4 |
monocyte | 6.60e-08 | 4 |
macrophage | 6.60e-08 | 4 |
tissue-resident macrophage | 6.60e-08 | 4 |
macrophage dendritic cell progenitor | 6.60e-08 | 4 |
monoblast | 6.60e-08 | 4 |
promonocyte | 6.60e-08 | 4 |
ectodermal cell | 1.01e-07 | 44 |
neurectodermal cell | 1.01e-07 | 44 |
embryonic cell | 3.68e-07 | 70 |
oligodendrocyte precursor cell | 3.71e-07 | 8 |
bone marrow cell | 4.00e-07 | 3 |
mesenchymal stem cell of the bone marrow | 4.00e-07 | 3 |
somatic stem cell | 9.82e-07 | 91 |
multi fate stem cell | 9.82e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
liver | 5.99e-24 | 22 |
epithelial sac | 5.99e-24 | 22 |
digestive gland | 5.99e-24 | 22 |
epithelium of foregut-midgut junction | 5.99e-24 | 22 |
anatomical boundary | 5.99e-24 | 22 |
hepatobiliary system | 5.99e-24 | 22 |
foregut-midgut junction | 5.99e-24 | 22 |
hepatic diverticulum | 5.99e-24 | 22 |
liver primordium | 5.99e-24 | 22 |
septum transversum | 5.99e-24 | 22 |
liver bud | 5.99e-24 | 22 |
digestive tract diverticulum | 1.11e-22 | 23 |
sac | 1.11e-22 | 23 |
exocrine gland | 1.16e-22 | 25 |
exocrine system | 1.16e-22 | 25 |
tube | 3.34e-11 | 114 |
anatomical conduit | 1.18e-10 | 122 |
trunk mesenchyme | 3.27e-10 | 45 |
epithelial tube | 1.45e-09 | 47 |
abdomen element | 5.65e-09 | 49 |
abdominal segment element | 5.65e-09 | 49 |
abdominal segment of trunk | 5.65e-09 | 49 |
abdomen | 5.65e-09 | 49 |
central nervous system | 8.79e-08 | 73 |
nervous system | 2.02e-07 | 75 |
organ system subdivision | 3.51e-07 | 194 |
regional part of nervous system | 3.63e-07 | 54 |