Personal tools

FFCP PHASE1:Mm9::chr12:3834789..3834813,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=68
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr12:3834789..3834813,+
|description=CAGE_peak_at_chr12:3834789..3834813,+
|description=CAGE_peak_at_chr12:3834789..3834813,+
|id=chr12:3834789..3834813,+
|id=chr12:3834789..3834813,+
|ontology_enrichment_celltype=CL:0000624!1.59e-07!8
|ontology_enrichment_celltype=CL:0000624!1.59e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000624,8.21e-26,8;CL:0000791,6.51e-23,9;CL:0000789,6.51e-23,9;CL:0002420,6.51e-23,9;CL:0002419,6.51e-23,9;CL:0000790,6.51e-23,9;CL:0000084,1.08e-18,11;CL:0000827,1.08e-18,11;CL:0000838,4.18e-17,12;CL:0000893,5.58e-16,6;CL:0002489,5.58e-16,6;CL:0000898,5.58e-16,6;CL:0000809,5.58e-16,6;CL:0000810,5.58e-16,6;CL:0000895,5.58e-16,6;CL:0000808,5.58e-16,6;CL:0000894,5.58e-16,6;CL:0000806,5.58e-16,6;CL:0000807,5.58e-16,6;CL:0000805,5.58e-16,6;CL:0002425,5.58e-16,6;CL:0002436,5.58e-16,6;CL:0002427,5.58e-16,6;CL:0002428,5.58e-16,6;CL:0002429,5.58e-16,6;CL:0002433,5.58e-16,6;CL:0002431,5.58e-16,6;CL:0002432,5.58e-16,6;CL:0000542,9.19e-16,13;CL:0000051,9.19e-16,13;CL:0000738,5.77e-12,17;CL:0002087,5.77e-12,17;CL:0002031,1.07e-10,25;CL:0000988,3.30e-08,32;CL:0002032,3.30e-08,32;CL:0000037,3.30e-08,32;CL:0000837,3.30e-08,32;CL:0002320,4.49e-07,46;CL:0000134,4.49e-07,46;CL:0000815,4.68e-07,1;CL:0000792,4.68e-07,1
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.12e-10!29;UBERON:0002370!1.74e-08!23;UBERON:0000974!1.74e-08!23;UBERON:0004807!1.74e-08!23;UBERON:0005058!1.74e-08!23;UBERON:0003351!1.74e-08!23;UBERON:0009113!1.74e-08!23;UBERON:0003295!1.74e-08!23;UBERON:0009722!1.74e-08!23;UBERON:0005562!1.74e-08!23;UBERON:0007690!1.74e-08!23;UBERON:0006562!8.49e-08!24;UBERON:0003408!8.49e-08!24;UBERON:0001557!8.49e-08!24;UBERON:0001042!8.49e-08!24;UBERON:0008814!8.49e-08!24;UBERON:0009145!8.49e-08!24;UBERON:0000065!2.10e-07!41;UBERON:0001004!5.60e-07!42
|ontology_enrichment_uberon=UBERON:0004177!3.12e-10!29;UBERON:0002370!1.74e-08!23;UBERON:0000974!1.74e-08!23;UBERON:0004807!1.74e-08!23;UBERON:0005058!1.74e-08!23;UBERON:0003351!1.74e-08!23;UBERON:0009113!1.74e-08!23;UBERON:0003295!1.74e-08!23;UBERON:0009722!1.74e-08!23;UBERON:0005562!1.74e-08!23;UBERON:0007690!1.74e-08!23;UBERON:0006562!8.49e-08!24;UBERON:0003408!8.49e-08!24;UBERON:0001557!8.49e-08!24;UBERON:0001042!8.49e-08!24;UBERON:0008814!8.49e-08!24;UBERON:0009145!8.49e-08!24;UBERON:0000065!2.10e-07!41;UBERON:0001004!5.60e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.49e-08,23;UBERON:0000974,1.49e-08,23;UBERON:0004807,1.49e-08,23;UBERON:0005058,1.49e-08,23;UBERON:0003351,1.49e-08,23;UBERON:0009113,1.49e-08,23;UBERON:0003295,1.49e-08,23;UBERON:0009722,1.49e-08,23;UBERON:0005562,1.49e-08,23;UBERON:0007690,1.49e-08,23;UBERON:0006562,3.53e-08,24;UBERON:0003408,3.53e-08,24;UBERON:0001557,3.53e-08,24;UBERON:0001042,3.53e-08,24;UBERON:0008814,3.53e-08,24;UBERON:0009145,3.53e-08,24;UBERON:0000077,2.88e-07,35;UBERON:0000072,3.20e-07,27;UBERON:0002384,4.49e-07,46
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,2.1950964985068,51.52867230751,65.0699383175142,42.6332740881507,41.4815226775749,0.684802919724823,0.437102012094987,0,0,1.39912375625629,0.315462165358238,0.274228867211478,0.84877930359606,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0.520455980298408,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0.662524555381181,0,0,0,0,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0.457500602818626,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0,0.204109497453984,0,0,0,0,0,0.879755620819744,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.610953983535943,0.387904974335251,0.280543279561274,0.442655759869801,0.295220295959204,0.156998727841375,0.123397163921801,0,0.333690211432188,0.786235980452812,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,1.24138163549592,0.713475270408282,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0.412773735926445,0,0.565105371014073,0.546776910884101,0.457556346413045,1.5298058699447,1.25956307091292,1.52019971184866,0,0.158167996790568,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.448549638131936,0,0.388902376688095,0.387479470433193,0.337912250981556,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0.389762468933385,0.179026695667481,0.39736270956253,0.480781798079875,1.18151621739662,0.504832249740738,0.533447646584999,0.907435666231565,0.487289403698762,1.15454209968395,0.935015217452552,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0,0,0.619747364743864,0,0,0,0.644613162144895,0,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,2.1950964985068,51.52867230751,65.0699383175142,42.6332740881507,41.4815226775749,0.684802919724823,0.437102012094987,0,0,1.39912375625629,0.315462165358238,0.274228867211478,0.84877930359606,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.335565212115473,1.45072428402269,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,0.520455980298408,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0.662524555381181,0,0,0,0,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0.457500602818626,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0,0.204109497453984,0,0,0,0,0,0.879755620819744,0,0,0,0.411564272815887,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.610953983535943,0.387904974335251,0.280543279561274,0.442655759869801,0.295220295959204,0.156998727841375,0.123397163921801,0,0.333690211432188,0.786235980452812,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,1.24138163549592,0.713475270408282,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0.412773735926445,0,0.565105371014073,0.546776910884101,0.457556346413045,1.5298058699447,1.25956307091292,1.52019971184866,0,0.158167996790568,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.448549638131936,0,0.388902376688095,0.387479470433193,0.337912250981556,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0.389762468933385,0.179026695667481,0.39736270956253,0.480781798079875,1.18151621739662,0.504832249740738,0.533447646584999,0.907435666231565,0.487289403698762,1.15454209968395,0.935015217452552,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0,0,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0,0,0.619747364743864,0,0,0,0.644613162144895,0,0.220591419119515,0.231867835620421
|short_description=p@chr12:3834789..3834813,+
|short_description=p@chr12:3834789..3834813,+
}}
}}

Latest revision as of 00:39, 5 August 2015

Short description:p@chr12:3834789..3834813, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:3834789..3834813, +
Coexpression cluster:MCL_coexpression_mm9:68
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr12:3834789..3834813+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E751.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F265.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E642.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F141.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell8.21e-268
mature alpha-beta T cell6.51e-239
alpha-beta T cell6.51e-239
immature T cell6.51e-239
mature T cell6.51e-239
immature alpha-beta T cell6.51e-239
T cell1.08e-1811
pro-T cell1.08e-1811
lymphoid lineage restricted progenitor cell4.18e-1712
thymocyte5.58e-166
double negative thymocyte5.58e-166
naive T cell5.58e-166
double-positive, alpha-beta thymocyte5.58e-166
CD4-positive, alpha-beta thymocyte5.58e-166
naive thymus-derived CD4-positive, alpha-beta T cell5.58e-166
DN4 thymocyte5.58e-166
DN1 thymic pro-T cell5.58e-166
DN2 thymocyte5.58e-166
DN3 thymocyte5.58e-166
immature single positive thymocyte5.58e-166
early T lineage precursor5.58e-166
mature CD4 single-positive thymocyte5.58e-166
resting double-positive thymocyte5.58e-166
double-positive blast5.58e-166
CD69-positive double-positive thymocyte5.58e-166
CD69-positive, CD4-positive single-positive thymocyte5.58e-166
CD4-positive, CD8-intermediate double-positive thymocyte5.58e-166
CD24-positive, CD4 single-positive thymocyte5.58e-166
lymphocyte9.19e-1613
common lymphoid progenitor9.19e-1613
leukocyte5.77e-1217
nongranular leukocyte5.77e-1217
hematopoietic lineage restricted progenitor cell1.07e-1025
hematopoietic cell3.30e-0832
hematopoietic oligopotent progenitor cell3.30e-0832
hematopoietic stem cell3.30e-0832
hematopoietic multipotent progenitor cell3.30e-0832
connective tissue cell4.49e-0746
mesenchymal cell4.49e-0746
regulatory T cell4.68e-071
CD4-positive, CD25-positive, alpha-beta regulatory T cell4.68e-071
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:3834789..3834813,%2B&oldid=3839265"