FFCP PHASE1:Mm9::chr9:40812645..40812656,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=291|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:40812645..40812656,-|id=chr9:40812645..40812656,-|ontology_enrichment_celltype=CL:0000791!1.46e-16!9;CL:0000789!1.46e-16!9;CL:0002420!1.46e-16!9;CL:0002419!1.46e-16!9;CL:0000790!1.46e-16!9;CL:0000893!7.60e-15!6;CL:0002489!7.60e-15!6;CL:0000898!7.60e-15!6;CL:0000809!7.60e-15!6;CL:0000810!7.60e-15!6;CL:0000895!7.60e-15!6;CL:0000808!7.60e-15!6;CL:0000894!7.60e-15!6;CL:0000806!7.60e-15!6;CL:0000807!7.60e-15!6;CL:0000805!7.60e-15!6;CL:0002425!7.60e-15!6;CL:0002436!7.60e-15!6;CL:0002427!7.60e-15!6;CL:0002428!7.60e-15!6;CL:0002429!7.60e-15!6;CL:0002433!7.60e-15!6;CL:0002431!7.60e-15!6;CL:0002432!7.60e-15!6;CL:0000624!2.45e-14!8;CL:0000084!2.93e-13!11;CL:0000827!2.93e-13!11;CL:0000838!5.08e-12!12;CL:0002031!1.49e-11!25;CL:0000542!5.66e-11!13;CL:0000051!5.66e-11!13;CL:0000988!8.48e-10!32;CL:0002032!8.48e-10!32;CL:0000037!8.48e-10!32;CL:0000566!8.48e-10!32;CL:0000837!8.48e-10!32;CL:0000738!5.04e-08!17;CL:0002087!5.04e-08!17|ontology_enrichment_celltype_v019_2=CL:0000893,1.47e-45,6;CL:0002489,1.47e-45,6;CL:0000898,1.47e-45,6;CL:0000809,1.47e-45,6;CL:0000810,1.47e-45,6;CL:0000895,1.47e-45,6;CL:0000808,1.47e-45,6;CL:0000894,1.47e-45,6;CL:0000806,1.47e-45,6;CL:0000807,1.47e-45,6;CL:0000805,1.47e-45,6;CL:0002425,1.47e-45,6;CL:0002436,1.47e-45,6;CL:0002427,1.47e-45,6;CL:0002428,1.47e-45,6;CL:0002429,1.47e-45,6;CL:0002433,1.47e-45,6;CL:0002431,1.47e-45,6;CL:0002432,1.47e-45,6;CL:0000791,1.18e-43,9;CL:0000789,1.18e-43,9;CL:0002420,1.18e-43,9;CL:0002419,1.18e-43,9;CL:0000790,1.18e-43,9;CL:0000084,8.77e-36,11;CL:0000827,8.77e-36,11;CL:0000624,2.69e-34,8;CL:0000838,7.89e-33,12;CL:0000542,2.50e-30,13;CL:0000051,2.50e-30,13;CL:0000738,2.95e-23,17;CL:0002087,2.95e-23,17;CL:0002031,7.05e-16,25;CL:0000988,1.97e-12,32;CL:0002032,1.97e-12,32;CL:0000037,1.97e-12,32;CL:0000837,1.97e-12,32;CL:0000625,2.59e-12,1;CL:0002320,1.16e-08,46;CL:0000134,1.16e-08,46;CL:0000219,2.24e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.00e-21!29;UBERON:0003408!2.03e-20!24;UBERON:0002193!7.54e-20!48;UBERON:0002390!2.67e-19!45;UBERON:0003061!2.67e-19!45;UBERON:0002370!1.37e-18!23;UBERON:0000974!1.37e-18!23;UBERON:0004807!1.37e-18!23;UBERON:0005058!1.37e-18!23;UBERON:0003351!1.37e-18!23;UBERON:0009113!1.37e-18!23;UBERON:0003295!1.37e-18!23;UBERON:0009722!1.37e-18!23;UBERON:0005562!1.37e-18!23;UBERON:0007690!1.37e-18!23;UBERON:0006562!1.16e-17!24;UBERON:0001557!1.16e-17!24;UBERON:0001042!1.16e-17!24;UBERON:0008814!1.16e-17!24;UBERON:0009145!1.16e-17!24;UBERON:0000072!2.69e-15!27;UBERON:0002405!3.80e-13!70;UBERON:0001004!2.03e-11!42;UBERON:0005057!2.11e-11!51;UBERON:0000063!5.52e-11!35;UBERON:0000065!3.35e-10!41;UBERON:0003081!3.61e-10!88;UBERON:0002530!4.24e-09!65;UBERON:0001041!1.78e-07!92;UBERON:0002368!7.72e-07!60;UBERON:0000077!8.04e-07!97;UBERON:0003929!9.43e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.55e-12,1;UBERON:0001097,1.55e-12,1;UBERON:0003968,1.55e-12,1;UBERON:0001467,1.55e-12,1;UBERON:0002370,3.76e-12,23;UBERON:0000974,3.76e-12,23;UBERON:0004807,3.76e-12,23;UBERON:0005058,3.76e-12,23;UBERON:0003351,3.76e-12,23;UBERON:0009113,3.76e-12,23;UBERON:0003295,3.76e-12,23;UBERON:0009722,3.76e-12,23;UBERON:0005562,3.76e-12,23;UBERON:0007690,3.76e-12,23;UBERON:0006562,1.18e-11,24;UBERON:0003408,1.18e-11,24;UBERON:0001557,1.18e-11,24;UBERON:0001042,1.18e-11,24;UBERON:0008814,1.18e-11,24;UBERON:0009145,1.18e-11,24;UBERON:0000072,2.20e-10,27;UBERON:0004177,1.11e-09,29;UBERON:0005057,1.11e-09,29;UBERON:0002384,1.16e-08,46;UBERON:0002193,2.50e-08,48;UBERON:0002405,2.50e-08,48;UBERON:0000077,4.74e-08,35;UBERON:0007811,7.86e-08,36;UBERON:0000065,6.84e-07,41;UBERON:0001004,9.93e-07,42|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,3.04283884218592,1.36974374580404,3.66951931378547,1.19840510951844,2.53519167015092,0,0.404950534779652,0,0.946386496074713,0.548457734422955,0.84877930359606,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0.29688427812965,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.27338845544205,0.686334519619568,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0,0.480781798079875,0.295379054349154,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:40812645..40812656,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=291 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:40812645..40812656,- | |||
|description=CAGE_peak_at_chr9:40812645..40812656,- | |||
|id=chr9:40812645..40812656,- | |||
|ontology_enrichment_celltype=CL:0000791!1.46e-16!9;CL:0000789!1.46e-16!9;CL:0002420!1.46e-16!9;CL:0002419!1.46e-16!9;CL:0000790!1.46e-16!9;CL:0000893!7.60e-15!6;CL:0002489!7.60e-15!6;CL:0000898!7.60e-15!6;CL:0000809!7.60e-15!6;CL:0000810!7.60e-15!6;CL:0000895!7.60e-15!6;CL:0000808!7.60e-15!6;CL:0000894!7.60e-15!6;CL:0000806!7.60e-15!6;CL:0000807!7.60e-15!6;CL:0000805!7.60e-15!6;CL:0002425!7.60e-15!6;CL:0002436!7.60e-15!6;CL:0002427!7.60e-15!6;CL:0002428!7.60e-15!6;CL:0002429!7.60e-15!6;CL:0002433!7.60e-15!6;CL:0002431!7.60e-15!6;CL:0002432!7.60e-15!6;CL:0000624!2.45e-14!8;CL:0000084!2.93e-13!11;CL:0000827!2.93e-13!11;CL:0000838!5.08e-12!12;CL:0002031!1.49e-11!25;CL:0000542!5.66e-11!13;CL:0000051!5.66e-11!13;CL:0000988!8.48e-10!32;CL:0002032!8.48e-10!32;CL:0000037!8.48e-10!32;CL:0000566!8.48e-10!32;CL:0000837!8.48e-10!32;CL:0000738!5.04e-08!17;CL:0002087!5.04e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.47e-45,6;CL:0002489,1.47e-45,6;CL:0000898,1.47e-45,6;CL:0000809,1.47e-45,6;CL:0000810,1.47e-45,6;CL:0000895,1.47e-45,6;CL:0000808,1.47e-45,6;CL:0000894,1.47e-45,6;CL:0000806,1.47e-45,6;CL:0000807,1.47e-45,6;CL:0000805,1.47e-45,6;CL:0002425,1.47e-45,6;CL:0002436,1.47e-45,6;CL:0002427,1.47e-45,6;CL:0002428,1.47e-45,6;CL:0002429,1.47e-45,6;CL:0002433,1.47e-45,6;CL:0002431,1.47e-45,6;CL:0002432,1.47e-45,6;CL:0000791,1.18e-43,9;CL:0000789,1.18e-43,9;CL:0002420,1.18e-43,9;CL:0002419,1.18e-43,9;CL:0000790,1.18e-43,9;CL:0000084,8.77e-36,11;CL:0000827,8.77e-36,11;CL:0000624,2.69e-34,8;CL:0000838,7.89e-33,12;CL:0000542,2.50e-30,13;CL:0000051,2.50e-30,13;CL:0000738,2.95e-23,17;CL:0002087,2.95e-23,17;CL:0002031,7.05e-16,25;CL:0000988,1.97e-12,32;CL:0002032,1.97e-12,32;CL:0000037,1.97e-12,32;CL:0000837,1.97e-12,32;CL:0000625,2.59e-12,1;CL:0002320,1.16e-08,46;CL:0000134,1.16e-08,46;CL:0000219,2.24e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.00e-21!29;UBERON:0003408!2.03e-20!24;UBERON:0002193!7.54e-20!48;UBERON:0002390!2.67e-19!45;UBERON:0003061!2.67e-19!45;UBERON:0002370!1.37e-18!23;UBERON:0000974!1.37e-18!23;UBERON:0004807!1.37e-18!23;UBERON:0005058!1.37e-18!23;UBERON:0003351!1.37e-18!23;UBERON:0009113!1.37e-18!23;UBERON:0003295!1.37e-18!23;UBERON:0009722!1.37e-18!23;UBERON:0005562!1.37e-18!23;UBERON:0007690!1.37e-18!23;UBERON:0006562!1.16e-17!24;UBERON:0001557!1.16e-17!24;UBERON:0001042!1.16e-17!24;UBERON:0008814!1.16e-17!24;UBERON:0009145!1.16e-17!24;UBERON:0000072!2.69e-15!27;UBERON:0002405!3.80e-13!70;UBERON:0001004!2.03e-11!42;UBERON:0005057!2.11e-11!51;UBERON:0000063!5.52e-11!35;UBERON:0000065!3.35e-10!41;UBERON:0003081!3.61e-10!88;UBERON:0002530!4.24e-09!65;UBERON:0001041!1.78e-07!92;UBERON:0002368!7.72e-07!60;UBERON:0000077!8.04e-07!97;UBERON:0003929!9.43e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.55e-12,1;UBERON:0001097,1.55e-12,1;UBERON:0003968,1.55e-12,1;UBERON:0001467,1.55e-12,1;UBERON:0002370,3.76e-12,23;UBERON:0000974,3.76e-12,23;UBERON:0004807,3.76e-12,23;UBERON:0005058,3.76e-12,23;UBERON:0003351,3.76e-12,23;UBERON:0009113,3.76e-12,23;UBERON:0003295,3.76e-12,23;UBERON:0009722,3.76e-12,23;UBERON:0005562,3.76e-12,23;UBERON:0007690,3.76e-12,23;UBERON:0006562,1.18e-11,24;UBERON:0003408,1.18e-11,24;UBERON:0001557,1.18e-11,24;UBERON:0001042,1.18e-11,24;UBERON:0008814,1.18e-11,24;UBERON:0009145,1.18e-11,24;UBERON:0000072,2.20e-10,27;UBERON:0004177,1.11e-09,29;UBERON:0005057,1.11e-09,29;UBERON:0002384,1.16e-08,46;UBERON:0002193,2.50e-08,48;UBERON:0002405,2.50e-08,48;UBERON:0000077,4.74e-08,35;UBERON:0007811,7.86e-08,36;UBERON:0000065,6.84e-07,41;UBERON:0001004,9.93e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,3.04283884218592,1.36974374580404,3.66951931378547,1.19840510951844,2.53519167015092,0,0.404950534779652,0,0.946386496074713,0.548457734422955,0.84877930359606,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0.29688427812965,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0.27338845544205,0.686334519619568,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0,0.480781798079875,0.295379054349154,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.288635524920988,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:40812645..40812656,- | |||
}} |
Latest revision as of 02:27, 5 August 2015
Short description: | p@chr9:40812645..40812656, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:40812645..40812656, - |
Coexpression cluster: | MCL_coexpression_mm9:291 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.55e-12 | 1 |
axillary lymph node | 1.55e-12 | 1 |
peripheral lymph node | 1.55e-12 | 1 |
shoulder | 1.55e-12 | 1 |
thymus | 3.76e-12 | 23 |
neck | 3.76e-12 | 23 |
respiratory system epithelium | 3.76e-12 | 23 |
hemolymphoid system gland | 3.76e-12 | 23 |
pharyngeal epithelium | 3.76e-12 | 23 |
thymic region | 3.76e-12 | 23 |
pharyngeal gland | 3.76e-12 | 23 |
entire pharyngeal arch endoderm | 3.76e-12 | 23 |
thymus primordium | 3.76e-12 | 23 |
early pharyngeal endoderm | 3.76e-12 | 23 |
pharynx | 1.18e-11 | 24 |
gland of gut | 1.18e-11 | 24 |
upper respiratory tract | 1.18e-11 | 24 |
chordate pharynx | 1.18e-11 | 24 |
pharyngeal arch system | 1.18e-11 | 24 |
pharyngeal region of foregut | 1.18e-11 | 24 |
segment of respiratory tract | 2.20e-10 | 27 |
hemopoietic organ | 1.11e-09 | 29 |
immune organ | 1.11e-09 | 29 |
connective tissue | 1.16e-08 | 46 |
hemolymphoid system | 2.50e-08 | 48 |
immune system | 2.50e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 4.74e-08 | 35 |
craniocervical region | 7.86e-08 | 36 |
respiratory tract | 6.84e-07 | 41 |
respiratory system | 9.93e-07 | 42 |