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FFCP PHASE1:Mm9::chr7:3332421..3332455,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3621|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:3332421..3332455,+|id=chr7:3332421..3332455,+|ontology_enrichment_celltype=CL:0002319!2.02e-16!43;CL:0000221!2.05e-16!44;CL:0000133!2.05e-16!44;CL:0000540!3.20e-15!33;CL:0000047!3.20e-15!33;CL:0000031!3.20e-15!33;CL:0000404!3.20e-15!33;CL:0000055!1.57e-13!50;CL:0000393!8.39e-13!39;CL:0000211!8.39e-13!39;CL:0000117!2.96e-10!23;CL:0000337!2.96e-10!23|ontology_enrichment_celltype_v019_2=CL:0000221,2.24e-17,44;CL:0000133,2.24e-17,44;CL:0002319,2.26e-17,43;CL:0000540,3.51e-17,33;CL:0000047,3.51e-17,33;CL:0000031,3.51e-17,33;CL:0000404,3.51e-17,33;CL:0000393,4.75e-13,39;CL:0000211,4.75e-13,39;CL:0000117,1.68e-11,23;CL:0000337,1.68e-11,23;CL:0000107,4.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.38e-27!73;UBERON:0005743!6.38e-27!73;UBERON:0000073!5.23e-26!75;UBERON:0001016!5.23e-26!75;UBERON:0004121!2.31e-24!102;UBERON:0000924!2.31e-24!102;UBERON:0006601!2.31e-24!102;UBERON:0002346!5.30e-20!71;UBERON:0003075!5.30e-20!71;UBERON:0007284!5.30e-20!71;UBERON:0000033!2.22e-17!63;UBERON:0001049!1.32e-15!52;UBERON:0005068!1.32e-15!52;UBERON:0006241!1.32e-15!52;UBERON:0007135!1.32e-15!52;UBERON:0000955!9.59e-15!50;UBERON:0006238!9.59e-15!50;UBERON:0003056!1.94e-14!49;UBERON:0002616!3.67e-14!49;UBERON:0003080!7.77e-11!40;UBERON:0002780!2.00e-10!39;UBERON:0001890!2.00e-10!39;UBERON:0006240!2.00e-10!39;UBERON:0002020!3.33e-10!34;UBERON:0000153!7.41e-09!94;UBERON:0000468!1.99e-08!333;UBERON:0002791!3.00e-08!29;UBERON:0003528!3.00e-08!29;UBERON:0001893!3.00e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-30,73;UBERON:0001016,1.44e-28,75;UBERON:0004121,3.01e-26,95;UBERON:0000924,3.01e-26,95;UBERON:0006601,3.01e-26,95;UBERON:0002346,5.79e-24,64;UBERON:0003075,5.79e-24,64;UBERON:0007284,5.79e-24,64;UBERON:0010371,3.77e-19,73;UBERON:0000073,3.92e-18,54;UBERON:0001049,2.49e-17,52;UBERON:0005068,2.49e-17,52;UBERON:0006241,2.49e-17,52;UBERON:0007135,2.49e-17,52;UBERON:0003056,2.55e-16,49;UBERON:0000955,3.92e-15,47;UBERON:0006238,3.92e-15,47;UBERON:0002616,1.75e-14,46;UBERON:0010314,2.08e-13,92;UBERON:0003080,2.25e-12,40;UBERON:0002780,6.68e-12,39;UBERON:0001890,6.68e-12,39;UBERON:0006240,6.68e-12,39;UBERON:0002020,1.92e-11,34;UBERON:0003528,3.27e-09,29;UBERON:0002791,3.27e-09,29;UBERON:0001893,3.27e-09,29;UBERON:0002410,4.80e-07,9;UBERON:0000956,6.09e-07,21;UBERON:0001869,6.09e-07,21;UBERON:0000203,6.09e-07,21|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.506884656097573,2.20256102594018,0.782391344348039,5.66865406589161,1.09843091367236,1.74986909166855,2.51975558925653,12.9377307928474,0,0,0,0,0.286533439938757,0.515672092277442,3.84401275633236,5.28990979272033,6.97214543856797,1.35537812827653,3.55717918444456,0,0,0,7.19040265244171,8.83702102239575,4.66603255388149,3.37514845829227,5.04779907243317,4.28476476605705,4.63823935998388,5.87955836231779,6.22995561618536,8.27296907949019,4.40463523997555,3.83062014255563,2.76491759861238,3.29715719325485,2.8361169516747,4.68822033501084,3.35019598801657,2.25105044012672,3.20876320331301,3.24091444021034,5.55249555116501,3.54158947068071,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0.517875767294343,0,1.73485326766136,1.52232739156071,2.99800146432876,0.904335843315735,1.41106448562846,0,0,0.433798070759735,0,0.970601099684455,0.662524555381181,0,0,4.9772735491963,6.91174132484402,0,0,0,0,4.19413790333504,4.11750542536764,1.63350657746724,4.17178368461463,3.3243009452943,3.53239675751252,5.02947915510049,2.64782346010822,0.248813941220186,0,0.210441855886474,9.88915366516548,3.90833577536904,6.48223667299257,8.59017461663576,5.23881043465224,4.99643509110914,5.24729657534481,3.62184719034622,14.6586235194333,11.1572587299013,13.1963343122962,5.04150184583422,8.06337022754234,1.74126083261083,1.64625709126355,4.17971960318836,0,0,0,3.10688658803253,1.40715635988658,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.492502392237286,0.324275238183423,0.292399974850665,0.219550115291051,0.402619256281115,2.3131894342054,1.3377599609307,0,0,8.31824177087412,5.80591679651096,4.89696353023955,2.21851877085677,2.66853652613844,2.09248188723815,0,0.494096864172033,0,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,3.79335801906163,2.17072173958485,0,3.05476991767971,2.32742984601151,1.33258057791605,0.505892296994058,0,0.470996183524124,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0,0,0,0,0,3.22135400009824,4.56301934037672,0.848725428875941,1.40814148973101,1.34005005953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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=3621
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr7:3332421..3332455,+
|description=CAGE_peak_at_chr7:3332421..3332455,+
|id=chr7:3332421..3332455,+
|ontology_enrichment_celltype=CL:0002319!2.02e-16!43;CL:0000221!2.05e-16!44;CL:0000133!2.05e-16!44;CL:0000540!3.20e-15!33;CL:0000047!3.20e-15!33;CL:0000031!3.20e-15!33;CL:0000404!3.20e-15!33;CL:0000055!1.57e-13!50;CL:0000393!8.39e-13!39;CL:0000211!8.39e-13!39;CL:0000117!2.96e-10!23;CL:0000337!2.96e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000221,2.24e-17,44;CL:0000133,2.24e-17,44;CL:0002319,2.26e-17,43;CL:0000540,3.51e-17,33;CL:0000047,3.51e-17,33;CL:0000031,3.51e-17,33;CL:0000404,3.51e-17,33;CL:0000393,4.75e-13,39;CL:0000211,4.75e-13,39;CL:0000117,1.68e-11,23;CL:0000337,1.68e-11,23;CL:0000107,4.80e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.38e-27!73;UBERON:0005743!6.38e-27!73;UBERON:0000073!5.23e-26!75;UBERON:0001016!5.23e-26!75;UBERON:0004121!2.31e-24!102;UBERON:0000924!2.31e-24!102;UBERON:0006601!2.31e-24!102;UBERON:0002346!5.30e-20!71;UBERON:0003075!5.30e-20!71;UBERON:0007284!5.30e-20!71;UBERON:0000033!2.22e-17!63;UBERON:0001049!1.32e-15!52;UBERON:0005068!1.32e-15!52;UBERON:0006241!1.32e-15!52;UBERON:0007135!1.32e-15!52;UBERON:0000955!9.59e-15!50;UBERON:0006238!9.59e-15!50;UBERON:0003056!1.94e-14!49;UBERON:0002616!3.67e-14!49;UBERON:0003080!7.77e-11!40;UBERON:0002780!2.00e-10!39;UBERON:0001890!2.00e-10!39;UBERON:0006240!2.00e-10!39;UBERON:0002020!3.33e-10!34;UBERON:0000153!7.41e-09!94;UBERON:0000468!1.99e-08!333;UBERON:0002791!3.00e-08!29;UBERON:0003528!3.00e-08!29;UBERON:0001893!3.00e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-30,73;UBERON:0001016,1.44e-28,75;UBERON:0004121,3.01e-26,95;UBERON:0000924,3.01e-26,95;UBERON:0006601,3.01e-26,95;UBERON:0002346,5.79e-24,64;UBERON:0003075,5.79e-24,64;UBERON:0007284,5.79e-24,64;UBERON:0010371,3.77e-19,73;UBERON:0000073,3.92e-18,54;UBERON:0001049,2.49e-17,52;UBERON:0005068,2.49e-17,52;UBERON:0006241,2.49e-17,52;UBERON:0007135,2.49e-17,52;UBERON:0003056,2.55e-16,49;UBERON:0000955,3.92e-15,47;UBERON:0006238,3.92e-15,47;UBERON:0002616,1.75e-14,46;UBERON:0010314,2.08e-13,92;UBERON:0003080,2.25e-12,40;UBERON:0002780,6.68e-12,39;UBERON:0001890,6.68e-12,39;UBERON:0006240,6.68e-12,39;UBERON:0002020,1.92e-11,34;UBERON:0003528,3.27e-09,29;UBERON:0002791,3.27e-09,29;UBERON:0001893,3.27e-09,29;UBERON:0002410,4.80e-07,9;UBERON:0000956,6.09e-07,21;UBERON:0001869,6.09e-07,21;UBERON:0000203,6.09e-07,21
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.506884656097573,2.20256102594018,0.782391344348039,5.66865406589161,1.09843091367236,1.74986909166855,2.51975558925653,12.9377307928474,0,0,0,0,0.286533439938757,0.515672092277442,3.84401275633236,5.28990979272033,6.97214543856797,1.35537812827653,3.55717918444456,0,0,0,7.19040265244171,8.83702102239575,4.66603255388149,3.37514845829227,5.04779907243317,4.28476476605705,4.63823935998388,5.87955836231779,6.22995561618536,8.27296907949019,4.40463523997555,3.83062014255563,2.76491759861238,3.29715719325485,2.8361169516747,4.68822033501084,3.35019598801657,2.25105044012672,3.20876320331301,3.24091444021034,5.55249555116501,3.54158947068071,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0.517875767294343,0,1.73485326766136,1.52232739156071,2.99800146432876,0.904335843315735,1.41106448562846,0,0,0.433798070759735,0,0.970601099684455,0.662524555381181,0,0,4.9772735491963,6.91174132484402,0,0,0,0,4.19413790333504,4.11750542536764,1.63350657746724,4.17178368461463,3.3243009452943,3.53239675751252,5.02947915510049,2.64782346010822,0.248813941220186,0,0.210441855886474,9.88915366516548,3.90833577536904,6.48223667299257,8.59017461663576,5.23881043465224,4.99643509110914,5.24729657534481,3.62184719034622,14.6586235194333,11.1572587299013,13.1963343122962,5.04150184583422,8.06337022754234,1.74126083261083,1.64625709126355,4.17971960318836,0,0,0,3.10688658803253,1.40715635988658,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.329119699826961,0.492502392237286,0.324275238183423,0.292399974850665,0.219550115291051,0.402619256281115,2.3131894342054,1.3377599609307,0,0,8.31824177087412,5.80591679651096,4.89696353023955,2.21851877085677,2.66853652613844,2.09248188723815,0,0.494096864172033,0,0.397912944082302,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,3.79335801906163,2.17072173958485,0,3.05476991767971,2.32742984601151,1.33258057791605,0.505892296994058,0,0.470996183524124,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0,0,0,0,0,0,3.22135400009824,4.56301934037672,0.848725428875941,1.40814148973101,1.34005005953453,1.42826184531608,0.195133647857799,0.945810864637146,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,3.69266356971921,5.50894926983355,2.29508923527346,1.00988370881749,7.2566890465739,10.9322848403059,11.2020166821055,5.25731355495614,3.56477878531831,4.52922449262132,5.66734982344852,5.84511715822624,5.92931666919785,6.42642632843614,0.425820255624806,4.62970569534864,3.09485222771795,2.14461159864296,0,1.94224508923985,1.81394134178851,0.377210159511796,1.18120757152309,0.307435147943927,0.775284879504663,0,1.06949213515416,0,0,1.03135543248187,0,6.12207719706455,4.13947788104814,3.64372959553707,3.19212420556092,3.92411398724555,3.1264313914403,1.522324745573,0.23467170806371,0,0.220528398054962,0,0.645857706783622,0.422190474497091,0.238744688006273,0.164140899745061,0.291480836629851,3.70850604021019,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,1.90934123603023,7.43389584915668,4.47302827679067,2.70013352054503,2.50905955217362,2.18362563746178,1.07891477107857,1.32245529160537,0,0.648074866458964,0,0,2.39226473670366,1.32366792365678,3.11121901350476,1.93739735216597,3.04121025883401,3.87278887530988,1.5624526181274,0.419437377702843,0,0,0,1.01362607645082,1.1298205288131,0,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,1.10992976687032,0.448569283047378,0.167884616364078,0.19318959403219,0.750729901804728,1.83151624267265,0.214368379079066,0,2.25900737046827,3.68260189205742,2.86447756719698,3.43706364687375,2.05524755931193,3.7769694869485,2.70009000092722,2.2516060161211,3.17199686288943,1.03552062350364,7.16132698330819,11.1726964552289,4.95127456686989,3.16038732188782,3.35381060204772,1.10306105070008,1.55572709461131,1.64828045791115,0.64183841918363,2.77966932940177,3.04175159868288,2.07488975524684,2.06011316433741,1.92075457214608,2.01024141344646,0.952587382566147,0.927074607558844,0.964546102318525,2.88460130562315,1.47198920134397,1.37147700954166,0.70990322463735,1.43061713968393,2.32554266611726,1.12931256498397,1.52306294205018,2.37806364734604,1.8414879800649,1.35804113845862,2.24456908663095,1.54225523561426,1.18205378850676,2.45538625901814,2.01417893541756,1.54325288784913,2.99772693525535,2.10538447600868,1.28922632428979,3.25190164517034,0.441182838239031,0.927471342481686
|short_description=p@chr7:3332421..3332455,+
}}

Latest revision as of 02:40, 5 August 2015

Short description:p@chr7:3332421..3332455, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:3332421..3332455, +
Coexpression cluster:MCL_coexpression_mm9:3621
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr7:3332421..3332455+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C69.89
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E214.66
forelimb, embryo E12.CNhs10600.359-14H211.16
forelimb, embryo E13.CNhs10589.384-1E213.20
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I87.16
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.11e-3073
nervous system1.44e-2875
ectoderm-derived structure3.01e-2695
ectoderm3.01e-2695
presumptive ectoderm3.01e-2695
neurectoderm5.79e-2464
neural plate5.79e-2464
presumptive neural plate5.79e-2464
ecto-epithelium3.77e-1973
regional part of nervous system3.92e-1854
neural tube2.49e-1752
neural rod2.49e-1752
future spinal cord2.49e-1752
neural keel2.49e-1752
pre-chordal neural plate2.55e-1649
brain3.92e-1547
future brain3.92e-1547
regional part of brain1.75e-1446
structure with developmental contribution from neural crest2.08e-1392
anterior neural tube2.25e-1240
regional part of forebrain6.68e-1239
forebrain6.68e-1239
future forebrain6.68e-1239
gray matter1.92e-1134
brain grey matter3.27e-0929
regional part of telencephalon3.27e-0929
telencephalon3.27e-0929
autonomic nervous system4.80e-079
cerebral cortex6.09e-0721
cerebral hemisphere6.09e-0721
pallium6.09e-0721
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