FFCP PHASE1:Mm9::chr12:83808041..83808052,+: Difference between revisions
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|id=chr12:83808041..83808052,+
|short_description=p@chr12:83808041..83808052,+
|description=CAGE_peak_at_chr12:83808041..83808052,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:83808041..83808052,+ | |||
|description=CAGE_peak_at_chr12:83808041..83808052,+ | |||
|id=chr12:83808041..83808052,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.99e-19!10;UBERON:0000411!1.99e-19!10;UBERON:0001950!1.99e-19!10;UBERON:0002619!3.71e-12!17;UBERON:0007100!8.78e-10!18;UBERON:0000948!8.78e-10!18;UBERON:0005498!8.78e-10!18;UBERON:0004140!8.78e-10!18;UBERON:0009881!8.78e-10!18;UBERON:0004141!8.78e-10!18;UBERON:0003084!8.78e-10!18;UBERON:0007005!8.78e-10!18;UBERON:0004139!8.78e-10!18;UBERON:0004291!8.78e-10!18;UBERON:0000025!2.08e-09!114;UBERON:0000956!2.65e-09!21;UBERON:0001869!2.65e-09!21;UBERON:0000203!2.65e-09!21;UBERON:0000955!3.79e-09!50;UBERON:0006238!3.79e-09!50;UBERON:0000033!9.16e-09!63;UBERON:0004111!3.02e-08!122;UBERON:0002616!3.05e-08!49;UBERON:0002346!9.36e-08!71;UBERON:0003075!9.36e-08!71;UBERON:0007284!9.36e-08!71;UBERON:0001049!1.68e-07!52;UBERON:0005068!1.68e-07!52;UBERON:0006241!1.68e-07!52;UBERON:0007135!1.68e-07!52;UBERON:0004535!4.08e-07!23;UBERON:0001009!4.08e-07!23;UBERON:0003056!5.61e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.74e-53,10;UBERON:0000411,1.74e-53,10;UBERON:0001950,1.74e-53,10;UBERON:0002619,1.40e-31,17;UBERON:0000956,1.33e-25,21;UBERON:0001869,1.33e-25,21;UBERON:0000203,1.33e-25,21;UBERON:0003528,1.41e-18,29;UBERON:0002791,1.41e-18,29;UBERON:0001893,1.41e-18,29;UBERON:0002020,7.40e-16,34;UBERON:0002780,7.88e-14,39;UBERON:0001890,7.88e-14,39;UBERON:0006240,7.88e-14,39;UBERON:0003080,1.75e-13,40;UBERON:0002616,1.00e-11,46;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0003056,5.25e-11,49;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0000073,5.55e-10,54;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0010314,1.48e-07,92;UBERON:0010371,2.35e-07,73;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.83115217823824,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0.329119699826961,1.14917224855367,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.460325236507177,1.71868654031819,5.84300819968538,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.83115217823824,0.324482526135515,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0.720248245844059,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0.329119699826961,1.14917224855367,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,0.460325236507177,1.71868654031819,5.84300819968538,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:83808041..83808052,+ | |||
}} | }} |
Latest revision as of 08:47, 5 August 2015
Short description: | p@chr12:83808041..83808052, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:83808041..83808052, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.74e-53 | 10 |
visual cortex | 1.74e-53 | 10 |
neocortex | 1.74e-53 | 10 |
regional part of cerebral cortex | 1.40e-31 | 17 |
cerebral cortex | 1.33e-25 | 21 |
cerebral hemisphere | 1.33e-25 | 21 |
pallium | 1.33e-25 | 21 |
brain grey matter | 1.41e-18 | 29 |
regional part of telencephalon | 1.41e-18 | 29 |
telencephalon | 1.41e-18 | 29 |
gray matter | 7.40e-16 | 34 |
regional part of forebrain | 7.88e-14 | 39 |
forebrain | 7.88e-14 | 39 |
future forebrain | 7.88e-14 | 39 |
anterior neural tube | 1.75e-13 | 40 |
regional part of brain | 1.00e-11 | 46 |
brain | 1.78e-11 | 47 |
future brain | 1.78e-11 | 47 |
pre-chordal neural plate | 5.25e-11 | 49 |
neural tube | 2.28e-10 | 52 |
neural rod | 2.28e-10 | 52 |
future spinal cord | 2.28e-10 | 52 |
neural keel | 2.28e-10 | 52 |
regional part of nervous system | 5.55e-10 | 54 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ecto-epithelium | 2.35e-07 | 73 |
central nervous system | 2.35e-07 | 73 |
nervous system | 3.72e-07 | 75 |