FFCP PHASE1:Mm9::chr15:6547859..6547870,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2990|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:6547859..6547870,+|id=chr15:6547859..6547870,+|ontology_enrichment_celltype=CL:0000791!4.07e-10!9;CL:0000789!4.07e-10!9;CL:0002420!4.07e-10!9;CL:0002419!4.07e-10!9;CL:0000790!4.07e-10!9;CL:0000624!5.03e-09!8;CL:0000084!5.48e-09!11;CL:0000827!5.48e-09!11;CL:0000838!5.67e-08!12;CL:0002031!5.92e-08!25;CL:0000738!1.42e-07!17;CL:0002087!1.42e-07!17;CL:0000542!4.03e-07!13;CL:0000051!4.03e-07!13;CL:0000893!6.69e-07!6;CL:0002489!6.69e-07!6;CL:0000898!6.69e-07!6;CL:0000809!6.69e-07!6;CL:0000810!6.69e-07!6;CL:0000895!6.69e-07!6;CL:0000808!6.69e-07!6;CL:0000894!6.69e-07!6;CL:0000806!6.69e-07!6;CL:0000807!6.69e-07!6;CL:0000805!6.69e-07!6;CL:0002425!6.69e-07!6;CL:0002436!6.69e-07!6;CL:0002427!6.69e-07!6;CL:0002428!6.69e-07!6;CL:0002429!6.69e-07!6;CL:0002433!6.69e-07!6;CL:0002431!6.69e-07!6;CL:0002432!6.69e-07!6;CL:0000988!9.72e-07!32;CL:0002032!9.72e-07!32;CL:0000037!9.72e-07!32;CL:0000566!9.72e-07!32;CL:0000837!9.72e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,3.54e-14,9;CL:0000789,3.54e-14,9;CL:0002420,3.54e-14,9;CL:0002419,3.54e-14,9;CL:0000790,3.54e-14,9;CL:0000738,7.22e-13,17;CL:0002087,7.22e-13,17;CL:0002031,1.12e-12,25;CL:0000084,1.72e-11,11;CL:0000827,1.72e-11,11;CL:0000624,3.33e-11,8;CL:0000838,1.76e-10,12;CL:0000542,1.26e-09,13;CL:0000051,1.26e-09,13;CL:0000988,1.61e-09,32;CL:0002032,1.61e-09,32;CL:0000037,1.61e-09,32;CL:0000837,1.61e-09,32;CL:0002476,9.06e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.81e-11,3;DOID:4045,9.81e-11,3|ontology_enrichment_uberon=UBERON:0004177!6.35e-16!29;UBERON:0002390!3.80e-14!45;UBERON:0003061!3.80e-14!45;UBERON:0002370!1.49e-13!23;UBERON:0000974!1.49e-13!23;UBERON:0004807!1.49e-13!23;UBERON:0005058!1.49e-13!23;UBERON:0003351!1.49e-13!23;UBERON:0009113!1.49e-13!23;UBERON:0003295!1.49e-13!23;UBERON:0009722!1.49e-13!23;UBERON:0005562!1.49e-13!23;UBERON:0007690!1.49e-13!23;UBERON:0002193!1.67e-13!48;UBERON:0006562!1.06e-12!24;UBERON:0003408!1.06e-12!24;UBERON:0001557!1.06e-12!24;UBERON:0001042!1.06e-12!24;UBERON:0008814!1.06e-12!24;UBERON:0009145!1.06e-12!24;UBERON:0005057!1.12e-10!51;UBERON:0002405!1.16e-10!70;UBERON:0000072!1.55e-10!27;UBERON:0000065!5.81e-08!41;UBERON:0001004!1.33e-07!42;UBERON:0000063!2.20e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.88e-19,23;UBERON:0000974,2.88e-19,23;UBERON:0004807,2.88e-19,23;UBERON:0005058,2.88e-19,23;UBERON:0003351,2.88e-19,23;UBERON:0009113,2.88e-19,23;UBERON:0003295,2.88e-19,23;UBERON:0009722,2.88e-19,23;UBERON:0005562,2.88e-19,23;UBERON:0007690,2.88e-19,23;UBERON:0006562,2.26e-18,24;UBERON:0003408,2.26e-18,24;UBERON:0001557,2.26e-18,24;UBERON:0001042,2.26e-18,24;UBERON:0008814,2.26e-18,24;UBERON:0009145,2.26e-18,24;UBERON:0002390,1.55e-16,45;UBERON:0003061,1.55e-16,45;UBERON:0000072,4.37e-16,27;UBERON:0002193,2.62e-15,48;UBERON:0002405,2.62e-15,48;UBERON:0004177,7.99e-15,29;UBERON:0005057,7.99e-15,29;UBERON:0000077,6.65e-12,35;UBERON:0007811,1.64e-11,36;UBERON:0000490,3.85e-10,66;UBERON:0000065,7.72e-10,41;UBERON:0001004,1.49e-09,42;UBERON:0000153,2.80e-09,43;UBERON:0003929,4.70e-08,55;UBERON:0002368,3.49e-07,60;UBERON:0003081,4.65e-07,87|phase1_expression=0,0,0,0,0,0.33575854382378,0,4.26106967357202,1.12630977721333,0.468129052643987,0.513653904676515,0.638177271962691,5.13602189793617,8.04267702254776,0.999329285446988,0,0,1.10411757875383,0.274228867211478,1.27316895539409,0.340173160604279,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,2.3440060335714,2.09409497589519,2.94115744015507,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,5.07753499407941,5.71359458542189,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0.505157755894224,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0,0,0.478364305972461,0,0.518054945597687,0.144649058581512,9.04747703635634,15.2293591469239,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.27338845544205,0.915112692826091,0.339956859987711,0.139951452323658,0.552799895217695,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.405450430580328,0.410843828659309,0.25984164595559,0,0.198681354781265,1.20195449519969,2.36303243479324,2.1202954489111,2.89585865288999,2.01652370273681,1.65678397257579,3.07877893249054,3.27255326108393,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr15:6547859..6547870,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2990 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:6547859..6547870,+ | |||
|description=CAGE_peak_at_chr15:6547859..6547870,+ | |||
|id=chr15:6547859..6547870,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.07e-10!9;CL:0000789!4.07e-10!9;CL:0002420!4.07e-10!9;CL:0002419!4.07e-10!9;CL:0000790!4.07e-10!9;CL:0000624!5.03e-09!8;CL:0000084!5.48e-09!11;CL:0000827!5.48e-09!11;CL:0000838!5.67e-08!12;CL:0002031!5.92e-08!25;CL:0000738!1.42e-07!17;CL:0002087!1.42e-07!17;CL:0000542!4.03e-07!13;CL:0000051!4.03e-07!13;CL:0000893!6.69e-07!6;CL:0002489!6.69e-07!6;CL:0000898!6.69e-07!6;CL:0000809!6.69e-07!6;CL:0000810!6.69e-07!6;CL:0000895!6.69e-07!6;CL:0000808!6.69e-07!6;CL:0000894!6.69e-07!6;CL:0000806!6.69e-07!6;CL:0000807!6.69e-07!6;CL:0000805!6.69e-07!6;CL:0002425!6.69e-07!6;CL:0002436!6.69e-07!6;CL:0002427!6.69e-07!6;CL:0002428!6.69e-07!6;CL:0002429!6.69e-07!6;CL:0002433!6.69e-07!6;CL:0002431!6.69e-07!6;CL:0002432!6.69e-07!6;CL:0000988!9.72e-07!32;CL:0002032!9.72e-07!32;CL:0000037!9.72e-07!32;CL:0000566!9.72e-07!32;CL:0000837!9.72e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.54e-14,9;CL:0000789,3.54e-14,9;CL:0002420,3.54e-14,9;CL:0002419,3.54e-14,9;CL:0000790,3.54e-14,9;CL:0000738,7.22e-13,17;CL:0002087,7.22e-13,17;CL:0002031,1.12e-12,25;CL:0000084,1.72e-11,11;CL:0000827,1.72e-11,11;CL:0000624,3.33e-11,8;CL:0000838,1.76e-10,12;CL:0000542,1.26e-09,13;CL:0000051,1.26e-09,13;CL:0000988,1.61e-09,32;CL:0002032,1.61e-09,32;CL:0000037,1.61e-09,32;CL:0000837,1.61e-09,32;CL:0002476,9.06e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.81e-11,3;DOID:4045,9.81e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.35e-16!29;UBERON:0002390!3.80e-14!45;UBERON:0003061!3.80e-14!45;UBERON:0002370!1.49e-13!23;UBERON:0000974!1.49e-13!23;UBERON:0004807!1.49e-13!23;UBERON:0005058!1.49e-13!23;UBERON:0003351!1.49e-13!23;UBERON:0009113!1.49e-13!23;UBERON:0003295!1.49e-13!23;UBERON:0009722!1.49e-13!23;UBERON:0005562!1.49e-13!23;UBERON:0007690!1.49e-13!23;UBERON:0002193!1.67e-13!48;UBERON:0006562!1.06e-12!24;UBERON:0003408!1.06e-12!24;UBERON:0001557!1.06e-12!24;UBERON:0001042!1.06e-12!24;UBERON:0008814!1.06e-12!24;UBERON:0009145!1.06e-12!24;UBERON:0005057!1.12e-10!51;UBERON:0002405!1.16e-10!70;UBERON:0000072!1.55e-10!27;UBERON:0000065!5.81e-08!41;UBERON:0001004!1.33e-07!42;UBERON:0000063!2.20e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.88e-19,23;UBERON:0000974,2.88e-19,23;UBERON:0004807,2.88e-19,23;UBERON:0005058,2.88e-19,23;UBERON:0003351,2.88e-19,23;UBERON:0009113,2.88e-19,23;UBERON:0003295,2.88e-19,23;UBERON:0009722,2.88e-19,23;UBERON:0005562,2.88e-19,23;UBERON:0007690,2.88e-19,23;UBERON:0006562,2.26e-18,24;UBERON:0003408,2.26e-18,24;UBERON:0001557,2.26e-18,24;UBERON:0001042,2.26e-18,24;UBERON:0008814,2.26e-18,24;UBERON:0009145,2.26e-18,24;UBERON:0002390,1.55e-16,45;UBERON:0003061,1.55e-16,45;UBERON:0000072,4.37e-16,27;UBERON:0002193,2.62e-15,48;UBERON:0002405,2.62e-15,48;UBERON:0004177,7.99e-15,29;UBERON:0005057,7.99e-15,29;UBERON:0000077,6.65e-12,35;UBERON:0007811,1.64e-11,36;UBERON:0000490,3.85e-10,66;UBERON:0000065,7.72e-10,41;UBERON:0001004,1.49e-09,42;UBERON:0000153,2.80e-09,43;UBERON:0003929,4.70e-08,55;UBERON:0002368,3.49e-07,60;UBERON:0003081,4.65e-07,87 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,4.26106967357202,1.12630977721333,0.468129052643987,0.513653904676515,0.638177271962691,5.13602189793617,8.04267702254776,0.999329285446988,0,0,1.10411757875383,0.274228867211478,1.27316895539409,0.340173160604279,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,2.3440060335714,2.09409497589519,2.94115744015507,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,5.07753499407941,5.71359458542189,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0.674586337154561,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0.505157755894224,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0,0,0,0.478364305972461,0,0.518054945597687,0.144649058581512,9.04747703635634,15.2293591469239,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.27338845544205,0.915112692826091,0.339956859987711,0.139951452323658,0.552799895217695,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.405450430580328,0.410843828659309,0.25984164595559,0,0.198681354781265,1.20195449519969,2.36303243479324,2.1202954489111,2.89585865288999,2.01652370273681,1.65678397257579,3.07877893249054,3.27255326108393,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.287177344778066,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr15:6547859..6547870,+ | |||
}} |
Latest revision as of 09:26, 5 August 2015
Short description: | p@chr15:6547859..6547870, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6547859..6547870, + |
Coexpression cluster: | MCL_coexpression_mm9:2990 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.54e-14 | 9 |
alpha-beta T cell | 3.54e-14 | 9 |
immature T cell | 3.54e-14 | 9 |
mature T cell | 3.54e-14 | 9 |
immature alpha-beta T cell | 3.54e-14 | 9 |
leukocyte | 7.22e-13 | 17 |
nongranular leukocyte | 7.22e-13 | 17 |
hematopoietic lineage restricted progenitor cell | 1.12e-12 | 25 |
T cell | 1.72e-11 | 11 |
pro-T cell | 1.72e-11 | 11 |
CD4-positive, alpha-beta T cell | 3.33e-11 | 8 |
lymphoid lineage restricted progenitor cell | 1.76e-10 | 12 |
lymphocyte | 1.26e-09 | 13 |
common lymphoid progenitor | 1.26e-09 | 13 |
hematopoietic cell | 1.61e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.61e-09 | 32 |
hematopoietic stem cell | 1.61e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.61e-09 | 32 |
bone marrow macrophage | 9.06e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.88e-19 | 23 |
neck | 2.88e-19 | 23 |
respiratory system epithelium | 2.88e-19 | 23 |
hemolymphoid system gland | 2.88e-19 | 23 |
pharyngeal epithelium | 2.88e-19 | 23 |
thymic region | 2.88e-19 | 23 |
pharyngeal gland | 2.88e-19 | 23 |
entire pharyngeal arch endoderm | 2.88e-19 | 23 |
thymus primordium | 2.88e-19 | 23 |
early pharyngeal endoderm | 2.88e-19 | 23 |
pharynx | 2.26e-18 | 24 |
gland of gut | 2.26e-18 | 24 |
upper respiratory tract | 2.26e-18 | 24 |
chordate pharynx | 2.26e-18 | 24 |
pharyngeal arch system | 2.26e-18 | 24 |
pharyngeal region of foregut | 2.26e-18 | 24 |
hematopoietic system | 1.55e-16 | 45 |
blood island | 1.55e-16 | 45 |
segment of respiratory tract | 4.37e-16 | 27 |
hemolymphoid system | 2.62e-15 | 48 |
immune system | 2.62e-15 | 48 |
hemopoietic organ | 7.99e-15 | 29 |
immune organ | 7.99e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 6.65e-12 | 35 |
craniocervical region | 1.64e-11 | 36 |
unilaminar epithelium | 3.85e-10 | 66 |
respiratory tract | 7.72e-10 | 41 |
respiratory system | 1.49e-09 | 42 |
anterior region of body | 2.80e-09 | 43 |
gut epithelium | 4.70e-08 | 55 |
endocrine gland | 3.49e-07 | 60 |
lateral plate mesoderm | 4.65e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.81e-11 | 3 |
muscle cancer | 9.81e-11 | 3 |