FFCP PHASE1:Mm9::chr15:6549721..6549724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2990 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:6549721..6549724,+ | |||
|description=CAGE_peak_at_chr15:6549721..6549724,+ | |||
|id=chr15:6549721..6549724,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.70e-12,17;CL:0002087,1.70e-12,17;CL:0000791,2.58e-12,9;CL:0000789,2.58e-12,9;CL:0002420,2.58e-12,9;CL:0002419,2.58e-12,9;CL:0000790,2.58e-12,9;CL:0002476,9.58e-11,2;CL:0000084,4.77e-10,11;CL:0000827,4.77e-10,11;CL:0000838,3.40e-09,12;CL:0000624,4.70e-09,8;CL:0000542,1.79e-08,13;CL:0000051,1.79e-08,13;CL:0002031,3.02e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.08e-12!29;UBERON:0005057!1.65e-10!51;UBERON:0003408!2.32e-10!24;UBERON:0002370!1.40e-09!23;UBERON:0000974!1.40e-09!23;UBERON:0004807!1.40e-09!23;UBERON:0005058!1.40e-09!23;UBERON:0003351!1.40e-09!23;UBERON:0009113!1.40e-09!23;UBERON:0003295!1.40e-09!23;UBERON:0009722!1.40e-09!23;UBERON:0005562!1.40e-09!23;UBERON:0007690!1.40e-09!23;UBERON:0002390!2.42e-09!45;UBERON:0003061!2.42e-09!45;UBERON:0002193!3.20e-09!48;UBERON:0006562!5.86e-09!24;UBERON:0001557!5.86e-09!24;UBERON:0001042!5.86e-09!24;UBERON:0008814!5.86e-09!24;UBERON:0009145!5.86e-09!24;UBERON:0002405!6.39e-09!70;UBERON:0001004!8.49e-09!42;UBERON:0000072!1.47e-08!27;UBERON:0001041!1.54e-08!92;UBERON:0000065!3.66e-08!41;UBERON:0003104!1.42e-07!131;UBERON:0009142!1.42e-07!131;UBERON:0000077!1.71e-07!97;UBERON:0003081!2.01e-07!88;UBERON:0000490!9.66e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.10e-11,23;UBERON:0000974,1.10e-11,23;UBERON:0004807,1.10e-11,23;UBERON:0005058,1.10e-11,23;UBERON:0003351,1.10e-11,23;UBERON:0009113,1.10e-11,23;UBERON:0003295,1.10e-11,23;UBERON:0009722,1.10e-11,23;UBERON:0005562,1.10e-11,23;UBERON:0007690,1.10e-11,23;UBERON:0004177,2.30e-11,29;UBERON:0005057,2.30e-11,29;UBERON:0006562,3.73e-11,24;UBERON:0003408,3.73e-11,24;UBERON:0001557,3.73e-11,24;UBERON:0001042,3.73e-11,24;UBERON:0008814,3.73e-11,24;UBERON:0009145,3.73e-11,24;UBERON:0002390,1.34e-10,45;UBERON:0003061,1.34e-10,45;UBERON:0002193,7.94e-10,48;UBERON:0002405,7.94e-10,48;UBERON:0000072,8.46e-10,27;UBERON:0000077,3.40e-09,35;UBERON:0000065,1.24e-07,41;UBERON:0001004,2.02e-07,42;UBERON:0007811,4.37e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,1.29123323441576,0.422366166455,0,0,0,2.05440875917447,2.27293046289393,0,0.404950534779652,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,1.76469446409304,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,0,1.45072428402269,2.35265659399725,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.454357159999104,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,1.03610989119537,0.433947175744535,7.53956419696361,5.4390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0.412773735926445,1.29636169158798,0.376736914009382,0.410082683163076,0.915112692826091,0.169978429993855,0,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0.77952493786677,0.358053391334963,0.79472541912506,1.44234539423963,2.51072196196781,0.807731599585181,0.609654453239999,2.11734988787365,1.26695244961678,4.13710919053417,3.97381467417334,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.467225281191051,1.29123323441576,0.422366166455,0,0,0,2.05440875917447,2.27293046289393,0,0.404950534779652,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,1.76469446409304,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,0,1.45072428402269,2.35265659399725,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.454357159999104,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,1.03610989119537,0.433947175744535,7.53956419696361,5.4390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,0,0,0.412773735926445,1.29636169158798,0.376736914009382,0.410082683163076,0.915112692826091,0.169978429993855,0,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0.77952493786677,0.358053391334963,0.79472541912506,1.44234539423963,2.51072196196781,0.807731599585181,0.609654453239999,2.11734988787365,1.26695244961678,4.13710919053417,3.97381467417334,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:6549721..6549724,+ | |||
}} | }} |
Latest revision as of 09:27, 5 August 2015
Short description: | p@chr15:6549721..6549724, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6549721..6549724, + |
Coexpression cluster: | MCL_coexpression_mm9:2990 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.70e-12 | 17 |
nongranular leukocyte | 1.70e-12 | 17 |
mature alpha-beta T cell | 2.58e-12 | 9 |
alpha-beta T cell | 2.58e-12 | 9 |
immature T cell | 2.58e-12 | 9 |
mature T cell | 2.58e-12 | 9 |
immature alpha-beta T cell | 2.58e-12 | 9 |
bone marrow macrophage | 9.58e-11 | 2 |
T cell | 4.77e-10 | 11 |
pro-T cell | 4.77e-10 | 11 |
lymphoid lineage restricted progenitor cell | 3.40e-09 | 12 |
CD4-positive, alpha-beta T cell | 4.70e-09 | 8 |
lymphocyte | 1.79e-08 | 13 |
common lymphoid progenitor | 1.79e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 3.02e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.10e-11 | 23 |
neck | 1.10e-11 | 23 |
respiratory system epithelium | 1.10e-11 | 23 |
hemolymphoid system gland | 1.10e-11 | 23 |
pharyngeal epithelium | 1.10e-11 | 23 |
thymic region | 1.10e-11 | 23 |
pharyngeal gland | 1.10e-11 | 23 |
entire pharyngeal arch endoderm | 1.10e-11 | 23 |
thymus primordium | 1.10e-11 | 23 |
early pharyngeal endoderm | 1.10e-11 | 23 |
hemopoietic organ | 2.30e-11 | 29 |
immune organ | 2.30e-11 | 29 |
pharynx | 3.73e-11 | 24 |
gland of gut | 3.73e-11 | 24 |
upper respiratory tract | 3.73e-11 | 24 |
chordate pharynx | 3.73e-11 | 24 |
pharyngeal arch system | 3.73e-11 | 24 |
pharyngeal region of foregut | 3.73e-11 | 24 |
hematopoietic system | 1.34e-10 | 45 |
blood island | 1.34e-10 | 45 |
hemolymphoid system | 7.94e-10 | 48 |
immune system | 7.94e-10 | 48 |
segment of respiratory tract | 8.46e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 3.40e-09 | 35 |
respiratory tract | 1.24e-07 | 41 |
respiratory system | 2.02e-07 | 42 |
craniocervical region | 4.37e-07 | 36 |