FFCP PHASE1:Mm9::chr17:90436235..90436241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:90436235..90436241,+ | |||
|description=CAGE_peak_at_chr17:90436235..90436241,+ | |description=CAGE_peak_at_chr17:90436235..90436241,+ | ||
|id=chr17:90436235..90436241,+ | |id=chr17:90436235..90436241,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.05e-09!23;CL:0000337!4.05e-09!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-26!52;UBERON:0005068!2.21e-26!52;UBERON:0006241!2.21e-26!52;UBERON:0007135!2.21e-26!52;UBERON:0002616!3.11e-24!49;UBERON:0000955!1.35e-23!50;UBERON:0006238!1.35e-23!50;UBERON:0002020!5.41e-23!34;UBERON:0003080!7.57e-22!40;UBERON:0002780!1.10e-20!39;UBERON:0001890!1.10e-20!39;UBERON:0006240!1.10e-20!39;UBERON:0002346!8.25e-20!71;UBERON:0003075!8.25e-20!71;UBERON:0007284!8.25e-20!71;UBERON:0001017!2.02e-19!73;UBERON:0005743!2.02e-19!73;UBERON:0000073!1.12e-18!75;UBERON:0001016!1.12e-18!75;UBERON:0000033!1.73e-18!63;UBERON:0003056!4.42e-18!49;UBERON:0002791!4.54e-18!29;UBERON:0003528!4.54e-18!29;UBERON:0001893!4.54e-18!29;UBERON:0002021!2.90e-16!10;UBERON:0000411!2.90e-16!10;UBERON:0001950!2.90e-16!10;UBERON:0000956!2.10e-15!21;UBERON:0001869!2.10e-15!21;UBERON:0000203!2.10e-15!21;UBERON:0004121!2.12e-13!102;UBERON:0000924!2.12e-13!102;UBERON:0006601!2.12e-13!102;UBERON:0007811!1.65e-11!86;UBERON:0002619!2.20e-10!17;UBERON:0000153!6.67e-10!94;UBERON:0000025!1.68e-08!114;UBERON:0004111!1.90e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.77e-52,10;UBERON:0000411,2.77e-52,10;UBERON:0001950,2.77e-52,10;UBERON:0002619,4.81e-31,17;UBERON:0000956,3.00e-25,21;UBERON:0001869,3.00e-25,21;UBERON:0000203,3.00e-25,21;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002020,8.43e-16,34;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.149790639404823,0,0.502617408451458,0.521472960576829,0.511430914660661,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,2.29158205375759,3.95262319390481,1.37016503954128,1.5107877947794,1.35004500046361,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,0.149790639404823,0,0.502617408451458,0.521472960576829,0.511430914660661,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,2.29158205375759,3.95262319390481,1.37016503954128,1.5107877947794,1.35004500046361,0.45032120322422,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr17:90436235..90436241,+ | |short_description=p@chr17:90436235..90436241,+ | ||
}} | }} |
Latest revision as of 11:58, 5 August 2015
Short description: | p@chr17:90436235..90436241, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:90436235..90436241, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.77e-52 | 10 |
visual cortex | 2.77e-52 | 10 |
neocortex | 2.77e-52 | 10 |
regional part of cerebral cortex | 4.81e-31 | 17 |
cerebral cortex | 3.00e-25 | 21 |
cerebral hemisphere | 3.00e-25 | 21 |
pallium | 3.00e-25 | 21 |
brain grey matter | 1.94e-18 | 29 |
regional part of telencephalon | 1.94e-18 | 29 |
telencephalon | 1.94e-18 | 29 |
gray matter | 8.43e-16 | 34 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |