FFCP PHASE1:Mm9::chr13:110693297..110693318,+: Difference between revisions
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{{FFCP|EntrezGene=238871|HGNC=|MCL_coexpression_id=170|UniProt=F7BK43,Q01063|association_with_transcript=0bp_to_ENSMUST00000119672,ENSMUST00000120664_5end|description=CAGE_peak_6_at_Pde4d_5end|id=chr13:110693297..110693318,+|ontology_enrichment_celltype=CL:0000791!1.89e-07!9;CL:0000789!1.89e-07!9;CL:0002420!1.89e-07!9;CL:0002419!1.89e-07!9;CL:0000790!1.89e-07!9;CL:0000624!9.60e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,4.00e-15,32;CL:0002032,4.00e-15,32;CL:0000037,4.00e-15,32;CL:0000837,4.00e-15,32;CL:0000791,3.87e-14,9;CL:0000789,3.87e-14,9;CL:0002420,3.87e-14,9;CL:0002419,3.87e-14,9;CL:0000790,3.87e-14,9;CL:0000624,1.22e-12,8;CL:0000838,2.07e-12,12;CL:0002031,6.68e-12,25;CL:0000542,3.14e-11,13;CL:0000051,3.14e-11,13;CL:0000084,4.23e-11,11;CL:0000827,4.23e-11,11;CL:0000893,1.02e-09,6;CL:0002489,1.02e-09,6;CL:0000898,1.02e-09,6;CL:0000809,1.02e-09,6;CL:0000810,1.02e-09,6;CL:0000895,1.02e-09,6;CL:0000808,1.02e-09,6;CL:0000894,1.02e-09,6;CL:0000806,1.02e-09,6;CL:0000807,1.02e-09,6;CL:0000805,1.02e-09,6;CL:0002425,1.02e-09,6;CL:0002436,1.02e-09,6;CL:0002427,1.02e-09,6;CL:0002428,1.02e-09,6;CL:0002429,1.02e-09,6;CL:0002433,1.02e-09,6;CL:0002431,1.02e-09,6;CL:0002432,1.02e-09,6;CL:0002320,1.33e-09,46;CL:0000134,1.33e-09,46;CL:0000219,3.87e-08,54;CL:0000738,6.38e-08,17;CL:0002087,6.38e-08,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!1.99e-15!27;UBERON:0003408!3.15e-14!24;UBERON:0006562!8.95e-14!24;UBERON:0001557!8.95e-14!24;UBERON:0001042!8.95e-14!24;UBERON:0008814!8.95e-14!24;UBERON:0009145!8.95e-14!24;UBERON:0002370!1.40e-13!23;UBERON:0000974!1.40e-13!23;UBERON:0004807!1.40e-13!23;UBERON:0005058!1.40e-13!23;UBERON:0003351!1.40e-13!23;UBERON:0009113!1.40e-13!23;UBERON:0003295!1.40e-13!23;UBERON:0009722!1.40e-13!23;UBERON:0005562!1.40e-13!23;UBERON:0007690!1.40e-13!23;UBERON:0002193!9.91e-13!48;UBERON:0000063!1.39e-12!35;UBERON:0002390!1.79e-12!45;UBERON:0003061!1.79e-12!45;UBERON:0004177!4.14e-12!29;UBERON:0001004!1.29e-10!42;UBERON:0000065!4.65e-10!41;UBERON:0003081!1.18e-09!88;UBERON:0002405!5.09e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.06e-26,27;UBERON:0003408,6.75e-26,24;UBERON:0002370,1.59e-24,23;UBERON:0000974,1.59e-24,23;UBERON:0004807,1.59e-24,23;UBERON:0005058,1.59e-24,23;UBERON:0003351,1.59e-24,23;UBERON:0009113,1.59e-24,23;UBERON:0003295,1.59e-24,23;UBERON:0009722,1.59e-24,23;UBERON:0005562,1.59e-24,23;UBERON:0007690,1.59e-24,23;UBERON:0006562,3.25e-23,24;UBERON:0001557,3.25e-23,24;UBERON:0001042,3.25e-23,24;UBERON:0008814,3.25e-23,24;UBERON:0009145,3.25e-23,24;UBERON:0002390,7.46e-20,45;UBERON:0003061,7.46e-20,45;UBERON:0004177,9.19e-20,29;UBERON:0005057,9.19e-20,29;UBERON:0002193,1.38e-19,48;UBERON:0002405,1.38e-19,48;UBERON:0007811,2.00e-16,36;UBERON:0001004,5.09e-16,42;UBERON:0000077,3.52e-15,35;UBERON:0000065,6.02e-15,41;UBERON:0000153,1.36e-12,43;UBERON:0003081,9.35e-10,87;UBERON:0002384,1.33e-09,46;UBERON:0003929,2.58e-07,55;UBERON:0000490,4.34e-07,66;UBERON:0000926,9.64e-07,120;UBERON:0004120,9.64e-07,120;UBERON:0006603,9.64e-07,120|phase1_expression=0.320297694209588,0,0,0,0,0,0,26.21203465864,31.8182512062767,37.6843887378409,5.47897498321616,4.70655738072485,36.1233540154844,37.2410914304929,1.99865857089398,0.809901069559304,2.09868563438444,4.25873923233621,5.34746291062381,4.2438965179803,0.765389611359628,0.0992909512008853,0,0.159992422793407,0.91763712426868,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,2.92972141515835,1.5626706890476,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0.734187008646726,2.34717403304412,0.218025156380447,0.219686182734472,0.194429899074283,0.979904951377538,0,8.38913030288682,213.256469751335,153.258772408964,0.514518872071894,0,1.03134418455488,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0.558365998002762,0.56276261003168,0.763991238884051,0.589257170947335,0.284743361598206,0,0.37863096666592,0.151143120213571,0.579728977403356,0,0.679971333707751,0,0,0,2.24711072210803,0,0.519572009205738,1.7666978725517,0.14084341977668,1.28326477414318,2.54805239706646,7.11066703153331,3.68034769719064,4.30711771307668,4.04419556011827,0.91347103775248,3.10725460376606,0.148442139064825,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,2.89198713839823,3.5384422077995,0.808834249737046,1.54589062922275,0,0,0.292780797011547,0.41889341362691,0.255457055208591,3.71426885968353,4.19931911695385,2.41433431438823,0.449371918214468,0,0.376963056338593,0.347648640384553,0.255715457330331,0.41557608911912,0,0.305518091550949,0.622034853050465,0.252722758433675,2.52530227063769,0.260240885925407,0,0.180062129805349,0,0,0.2562274405697,0.187403449119458,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:238871 | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F7BK43,uniprot:Q01063 | |||
|association_with_transcript=0bp_to_ENSMUST00000119672,ENSMUST00000120664_5end | |||
|cluster_id=chr13:110693297..110693318,+ | |||
|description=CAGE_peak_6_at_Pde4d_5end | |||
|id=chr13:110693297..110693318,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.89e-07!9;CL:0000789!1.89e-07!9;CL:0002420!1.89e-07!9;CL:0002419!1.89e-07!9;CL:0000790!1.89e-07!9;CL:0000624!9.60e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.00e-15,32;CL:0002032,4.00e-15,32;CL:0000037,4.00e-15,32;CL:0000837,4.00e-15,32;CL:0000791,3.87e-14,9;CL:0000789,3.87e-14,9;CL:0002420,3.87e-14,9;CL:0002419,3.87e-14,9;CL:0000790,3.87e-14,9;CL:0000624,1.22e-12,8;CL:0000838,2.07e-12,12;CL:0002031,6.68e-12,25;CL:0000542,3.14e-11,13;CL:0000051,3.14e-11,13;CL:0000084,4.23e-11,11;CL:0000827,4.23e-11,11;CL:0000893,1.02e-09,6;CL:0002489,1.02e-09,6;CL:0000898,1.02e-09,6;CL:0000809,1.02e-09,6;CL:0000810,1.02e-09,6;CL:0000895,1.02e-09,6;CL:0000808,1.02e-09,6;CL:0000894,1.02e-09,6;CL:0000806,1.02e-09,6;CL:0000807,1.02e-09,6;CL:0000805,1.02e-09,6;CL:0002425,1.02e-09,6;CL:0002436,1.02e-09,6;CL:0002427,1.02e-09,6;CL:0002428,1.02e-09,6;CL:0002429,1.02e-09,6;CL:0002433,1.02e-09,6;CL:0002431,1.02e-09,6;CL:0002432,1.02e-09,6;CL:0002320,1.33e-09,46;CL:0000134,1.33e-09,46;CL:0000219,3.87e-08,54;CL:0000738,6.38e-08,17;CL:0002087,6.38e-08,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!1.99e-15!27;UBERON:0003408!3.15e-14!24;UBERON:0006562!8.95e-14!24;UBERON:0001557!8.95e-14!24;UBERON:0001042!8.95e-14!24;UBERON:0008814!8.95e-14!24;UBERON:0009145!8.95e-14!24;UBERON:0002370!1.40e-13!23;UBERON:0000974!1.40e-13!23;UBERON:0004807!1.40e-13!23;UBERON:0005058!1.40e-13!23;UBERON:0003351!1.40e-13!23;UBERON:0009113!1.40e-13!23;UBERON:0003295!1.40e-13!23;UBERON:0009722!1.40e-13!23;UBERON:0005562!1.40e-13!23;UBERON:0007690!1.40e-13!23;UBERON:0002193!9.91e-13!48;UBERON:0000063!1.39e-12!35;UBERON:0002390!1.79e-12!45;UBERON:0003061!1.79e-12!45;UBERON:0004177!4.14e-12!29;UBERON:0001004!1.29e-10!42;UBERON:0000065!4.65e-10!41;UBERON:0003081!1.18e-09!88;UBERON:0002405!5.09e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.06e-26,27;UBERON:0003408,6.75e-26,24;UBERON:0002370,1.59e-24,23;UBERON:0000974,1.59e-24,23;UBERON:0004807,1.59e-24,23;UBERON:0005058,1.59e-24,23;UBERON:0003351,1.59e-24,23;UBERON:0009113,1.59e-24,23;UBERON:0003295,1.59e-24,23;UBERON:0009722,1.59e-24,23;UBERON:0005562,1.59e-24,23;UBERON:0007690,1.59e-24,23;UBERON:0006562,3.25e-23,24;UBERON:0001557,3.25e-23,24;UBERON:0001042,3.25e-23,24;UBERON:0008814,3.25e-23,24;UBERON:0009145,3.25e-23,24;UBERON:0002390,7.46e-20,45;UBERON:0003061,7.46e-20,45;UBERON:0004177,9.19e-20,29;UBERON:0005057,9.19e-20,29;UBERON:0002193,1.38e-19,48;UBERON:0002405,1.38e-19,48;UBERON:0007811,2.00e-16,36;UBERON:0001004,5.09e-16,42;UBERON:0000077,3.52e-15,35;UBERON:0000065,6.02e-15,41;UBERON:0000153,1.36e-12,43;UBERON:0003081,9.35e-10,87;UBERON:0002384,1.33e-09,46;UBERON:0003929,2.58e-07,55;UBERON:0000490,4.34e-07,66;UBERON:0000926,9.64e-07,120;UBERON:0004120,9.64e-07,120;UBERON:0006603,9.64e-07,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,26.21203465864,31.8182512062767,37.6843887378409,5.47897498321616,4.70655738072485,36.1233540154844,37.2410914304929,1.99865857089398,0.809901069559304,2.09868563438444,4.25873923233621,5.34746291062381,4.2438965179803,0.765389611359628,0.0992909512008853,0,0.159992422793407,0.91763712426868,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,2.92972141515835,1.5626706890476,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0.734187008646726,2.34717403304412,0.218025156380447,0.219686182734472,0.194429899074283,0.979904951377538,0,8.38913030288682,213.256469751335,153.258772408964,0.514518872071894,0,1.03134418455488,0,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0.558365998002762,0.56276261003168,0.763991238884051,0.589257170947335,0.284743361598206,0,0.37863096666592,0.151143120213571,0.579728977403356,0,0.679971333707751,0,0,0,2.24711072210803,0,0.519572009205738,1.7666978725517,0.14084341977668,1.28326477414318,2.54805239706646,7.11066703153331,3.68034769719064,4.30711771307668,4.04419556011827,0.91347103775248,3.10725460376606,0.148442139064825,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,2.89198713839823,3.5384422077995,0.808834249737046,1.54589062922275,0,0,0.292780797011547,0.41889341362691,0.255457055208591,3.71426885968353,4.19931911695385,2.41433431438823,0.449371918214468,0,0.376963056338593,0.347648640384553,0.255715457330331,0.41557608911912,0,0.305518091550949,0.622034853050465,0.252722758433675,2.52530227063769,0.260240885925407,0,0.180062129805349,0,0,0.2562274405697,0.187403449119458,0,0,0.756424320671277,0.527853372491847,0.657587197282725,0.556094498451196,0.696504333044333,0.823128545631774,0,0,2.31613116403244,1.98914449576915,0.828503090142008,0.469052119962192,0,0.710234206755631,0,0,0.697601834251224,0.268273401399619,0.116765342367169,0,0.164167464079095,0.56748166682099,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0.610953983535943,0.193952487167626,0.210407459670956,0.126473074248515,0,0.156998727841375,0.616985819609003,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.964708639009667,0.25462585178142,0.863088412352432,1.29708181420028,0,0,0.372140947668503,0,0,0,0.482443521363367,0.923765950833023,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.585400943573396,0.157635144106191,0.8858587585951,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0.983528546038072,0.275936746304732,0.80275294993896,0.234423373184406,0.983609672260053,1.76729649043061,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.851640511249612,0.178065603667255,0,0.164970122972535,1.32745138339963,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0,0.632073515871632,0,1.03135543248187,0.680879211507576,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0.938686832254841,0.63549621259146,0,0.32977250588296,1.13025098687134,0.844380948994182,1.07435109602823,0.164140899745061,0.291480836629851,0.927126510052548,1.53783792718067,0.82554747185289,0.185194527369712,0.376736914009382,0.410082683163076,0.228778173206523,6.79913719975421,7.41742697315387,6.63359874261234,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0,0.247960367176008,0.523511883968059,0.388844919875379,7.45607175704311,0.56369293868419,0,0,0.388902376688095,0.258319646955462,0.506868376472335,0,0.2604087696879,0,1.20792060413003,0.576060012515731,10.4283669807299,1.01362607645082,0.821687657318618,0.51968329191118,2.68540043501222,4.96703386953162,8.17329056735788,6.94140777720513,5.75508764704442,4.80102881926499,7.05783295957884,12.2796929732088,10.6795144220766,11.6876902181569,0.906921534460845,0,0,0,0.965947970160952,1.50145980360946,0.549454872801795,0.857473516316263,0,1.12950368523413,0.920650473014354,0,0.68741272937475,0,0.755393897389701,0,0.900642406448441,0.453142408984205,1.55328093525546,0.518936737920883,0,0.341467211508268,0.243106717068294,0,0.551530525350042,0.666740183404846,1.03017528619447,0.64183841918363,0,0.25347929989024,0.377252682772152,0.655490552289177,0.512201219238954,0.746661096422973,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0.476872379894642,0.581385666529314,0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| |||
|short_description=p6@Pde4d | |||
}} |
Revision as of 14:20, 5 August 2015
Short description: | p6@Pde4d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pde4d_5end |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | 0bp_to_ENSMUST00000119672, ENSMUST00000120664_5end |
EntrezGene: | 238871 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data