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FFCP PHASE1:Mm9::chr4:76096788..76096815,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:76096788..76096815,+
|description=CAGE_peak_at_chr4:76096788..76096815,+
|description=CAGE_peak_at_chr4:76096788..76096815,+
|id=chr4:76096788..76096815,+
|id=chr4:76096788..76096815,+
|ontology_enrichment_celltype=CL:0000117!1.15e-10!23;CL:0000337!1.15e-10!23
|ontology_enrichment_celltype=CL:0000117!1.15e-10!23;CL:0000337!1.15e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-08,23;CL:0000337,1.85e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.97e-17!71;UBERON:0003075!4.97e-17!71;UBERON:0007284!4.97e-17!71;UBERON:0003056!1.27e-14!49;UBERON:0000033!1.04e-13!63;UBERON:0001049!7.87e-13!52;UBERON:0005068!7.87e-13!52;UBERON:0006241!7.87e-13!52;UBERON:0007135!7.87e-13!52;UBERON:0004121!2.39e-11!102;UBERON:0000924!2.39e-11!102;UBERON:0006601!2.39e-11!102;UBERON:0002020!3.62e-11!34;UBERON:0001017!2.06e-10!73;UBERON:0005743!2.06e-10!73;UBERON:0000073!6.30e-10!75;UBERON:0001016!6.30e-10!75;UBERON:0002616!7.66e-10!49;UBERON:0000955!7.79e-10!50;UBERON:0006238!7.79e-10!50;UBERON:0003080!8.89e-10!40;UBERON:0002780!1.63e-09!39;UBERON:0001890!1.63e-09!39;UBERON:0006240!1.63e-09!39;UBERON:0002791!7.54e-08!29;UBERON:0003528!7.54e-08!29;UBERON:0001893!7.54e-08!29;UBERON:0000153!7.09e-07!94
|ontology_enrichment_uberon=UBERON:0002346!4.97e-17!71;UBERON:0003075!4.97e-17!71;UBERON:0007284!4.97e-17!71;UBERON:0003056!1.27e-14!49;UBERON:0000033!1.04e-13!63;UBERON:0001049!7.87e-13!52;UBERON:0005068!7.87e-13!52;UBERON:0006241!7.87e-13!52;UBERON:0007135!7.87e-13!52;UBERON:0004121!2.39e-11!102;UBERON:0000924!2.39e-11!102;UBERON:0006601!2.39e-11!102;UBERON:0002020!3.62e-11!34;UBERON:0001017!2.06e-10!73;UBERON:0005743!2.06e-10!73;UBERON:0000073!6.30e-10!75;UBERON:0001016!6.30e-10!75;UBERON:0002616!7.66e-10!49;UBERON:0000955!7.79e-10!50;UBERON:0006238!7.79e-10!50;UBERON:0003080!8.89e-10!40;UBERON:0002780!1.63e-09!39;UBERON:0001890!1.63e-09!39;UBERON:0006240!1.63e-09!39;UBERON:0002791!7.54e-08!29;UBERON:0003528!7.54e-08!29;UBERON:0001893!7.54e-08!29;UBERON:0000153!7.09e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.09e-13,64;UBERON:0003075,1.09e-13,64;UBERON:0007284,1.09e-13,64;UBERON:0003056,1.08e-11,49;UBERON:0010371,2.80e-11,73;UBERON:0010314,5.49e-10,92;UBERON:0000970,4.03e-09,9;UBERON:0000019,4.03e-09,9;UBERON:0000047,4.03e-09,9;UBERON:0010312,4.03e-09,9;UBERON:0004088,4.03e-09,9;UBERON:0002104,4.03e-09,9;UBERON:0001456,4.03e-09,9;UBERON:0003072,4.03e-09,9;UBERON:0004128,4.03e-09,9;UBERON:0003071,4.03e-09,9;UBERON:0001049,6.13e-09,52;UBERON:0005068,6.13e-09,52;UBERON:0006241,6.13e-09,52;UBERON:0007135,6.13e-09,52;UBERON:0004121,6.29e-09,95;UBERON:0000924,6.29e-09,95;UBERON:0006601,6.29e-09,95;UBERON:0000073,3.29e-08,54;UBERON:0002240,7.23e-08,6;UBERON:0005174,7.23e-08,6;UBERON:0001137,7.23e-08,6;UBERON:0002020,1.80e-07,34;UBERON:0000020,2.03e-07,12;UBERON:0001032,2.03e-07,12;UBERON:0004456,2.03e-07,12;UBERON:0001948,2.12e-07,5;UBERON:0002315,2.12e-07,5;UBERON:0001017,3.06e-07,73;UBERON:0001444,5.10e-07,11;UBERON:0001016,8.25e-07,75
|phase1_expression=1.12104192973356,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,5.46254444320914,7.93486468908049,5.70448263155561,0,0,0,0,0,0,0,1.24427534770173,0.810035629990144,0.630974884054146,6.28432165688368,6.62605622854841,1.22490799214954,0.575072826109418,0.919218786610021,1.10115880999389,0.766124028511126,0.614426133024974,6.4624280987795,7.41049913179518,6.25096044668112,0.279182999001381,0.56276261003168,1.37518422999129,13.258286346315,14.2371680799103,12.6751623161204,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,1.04091196059682,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0.628332956648377,0,0.144599356919912,0,0.161766849947409,1.10420759230197,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,3.14135880282161,1.21677024134594,0.511430914660661,2.90903262383384,2.43361894601636,0.509196819251581,0.622034853050465,0,1.68353484709179,1.17108398666433,2.29902104433473,2.52086981727489,2.71268672104287,2.65342346690179,4.99643509110914,3.84177070694888,2.58703370739016,1.5089759505299,2.26927296201383,2.81521798662318,2.19195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,1.03562886267751,1.17263029990548,1.2604344302271,1.18372367792605,0.787056926989615,1.07986979021165,0.465067889500816,0.536546802799238,0.817357396570186,0.16455984991348,0,0,0,0,0,1.89260953707715,3.70456604565424,0,0.264450566663544,1.2797295032114,0.696710015581316,0.128867461322093,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,2.65535061334314,0.571242563048644,0,0.407302655690628,0.581857461502877,0.0701358198903186,0.126473074248515,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,0.814824882210129,0.848725428875941,0,0,0.714130922658041,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,9.22610553853746,0.890328018336276,1.14020871547503,0.329940245945071,0,0.728341908464944,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,1.4229455216103,3.00071849044229,0.709360934569094,1.78368817602071,1.15184314421485,0,0,0,0,0,0.161464426695906,0,0,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,0.406638934253697,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,1.19613236835183,0.992750942742586,0.583353565032143,1.03327858782185,1.01373675294467,1.05621514781179,0.651021924219751,0,0,0,0,0.810900861160657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,4.01026859407578,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,1.764384908931,3.59122386060928,1.36586884603307,1.94485373654635,2.30574478890781,0.551530525350042,1.55572709461131,1.23621034343337,0.64183841918363,2.52697211763797,1.77435509923168,1.50901073108861,1.96647165686753,1.85672941974121,1.78049953762401,3.33405583898152,0.927074607558844,1.92909220463705,0.412085900803307,1.76638704161277,1.71434626192708,1.77475806159337,1.90748951957857,1.16277133305863,1.69396884747595,1.86152137361688,1.09756783723664,0.526139422875686,2.44447404922551,1.68342681497322,0.711810108745045,1.57607171800902,1.22769312950907,1.23949472948773,1.15743966588685,3.99696924700713,2.33931608445408,1.50409737833809,0.956441660344217,0.661774257358546,0.695603506861264
|phase1_expression=1.12104192973356,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,5.46254444320914,7.93486468908049,5.70448263155561,0,0,0,0,0,0,0,1.24427534770173,0.810035629990144,0.630974884054146,6.28432165688368,6.62605622854841,1.22490799214954,0.575072826109418,0.919218786610021,1.10115880999389,0.766124028511126,0.614426133024974,6.4624280987795,7.41049913179518,6.25096044668112,0.279182999001381,0.56276261003168,1.37518422999129,13.258286346315,14.2371680799103,12.6751623161204,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,1.04091196059682,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0.628332956648377,0,0.144599356919912,0,0.161766849947409,1.10420759230197,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,0.915001205637253,3.14135880282161,1.21677024134594,0.511430914660661,2.90903262383384,2.43361894601636,0.509196819251581,0.622034853050465,0,1.68353484709179,1.17108398666433,2.29902104433473,2.52086981727489,2.71268672104287,2.65342346690179,4.99643509110914,3.84177070694888,2.58703370739016,1.5089759505299,2.26927296201383,2.81521798662318,2.19195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,1.03562886267751,1.17263029990548,1.2604344302271,1.18372367792605,0.787056926989615,1.07986979021165,0.465067889500816,0.536546802799238,0.817357396570186,0.16455984991348,0,0,0,0,0,1.89260953707715,3.70456604565424,0,0.264450566663544,1.2797295032114,0.696710015581316,0.128867461322093,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0,2.65535061334314,0.571242563048644,0,0.407302655690628,0.581857461502877,0.0701358198903186,0.126473074248515,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,0.814824882210129,0.848725428875941,0,0,0.714130922658041,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,9.22610553853746,0.890328018336276,1.14020871547503,0.329940245945071,0,0.728341908464944,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,1.4229455216103,3.00071849044229,0.709360934569094,1.78368817602071,1.15184314421485,0,0,0,0,0,0.161464426695906,0,0,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,0.406638934253697,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,1.19613236835183,0.992750942742586,0.583353565032143,1.03327858782185,1.01373675294467,1.05621514781179,0.651021924219751,0,0,0,0,0.810900861160657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,4.01026859407578,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,1.764384908931,3.59122386060928,1.36586884603307,1.94485373654635,2.30574478890781,0.551530525350042,1.55572709461131,1.23621034343337,0.64183841918363,2.52697211763797,1.77435509923168,1.50901073108861,1.96647165686753,1.85672941974121,1.78049953762401,3.33405583898152,0.927074607558844,1.92909220463705,0.412085900803307,1.76638704161277,1.71434626192708,1.77475806159337,1.90748951957857,1.16277133305863,1.69396884747595,1.86152137361688,1.09756783723664,0.526139422875686,2.44447404922551,1.68342681497322,0.711810108745045,1.57607171800902,1.22769312950907,1.23949472948773,1.15743966588685,3.99696924700713,2.33931608445408,1.50409737833809,0.956441660344217,0.661774257358546,0.695603506861264
|short_description=p@chr4:76096788..76096815,+
|short_description=p@chr4:76096788..76096815,+
}}
}}

Latest revision as of 17:39, 5 August 2015

Short description:p@chr4:76096788..76096815, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:76096788..76096815, +
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr4:76096788..76096815+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.85e-0823
neuroblast (sensu Vertebrata)1.85e-0823

Uber anatomy
Ontology termp-valuen
neurectoderm1.09e-1364
neural plate1.09e-1364
presumptive neural plate1.09e-1364
pre-chordal neural plate1.08e-1149
ecto-epithelium2.80e-1173
structure with developmental contribution from neural crest5.49e-1092
eye4.03e-099
camera-type eye4.03e-099
simple eye4.03e-099
immature eye4.03e-099
ocular region4.03e-099
visual system4.03e-099
face4.03e-099
optic cup4.03e-099
optic vesicle4.03e-099
eye primordium4.03e-099
neural tube6.13e-0952
neural rod6.13e-0952
future spinal cord6.13e-0952
neural keel6.13e-0952
ectoderm-derived structure6.29e-0995
ectoderm6.29e-0995
presumptive ectoderm6.29e-0995
regional part of nervous system3.29e-0854
spinal cord7.23e-086
dorsal region element7.23e-086
dorsum7.23e-086
gray matter1.80e-0734
sense organ2.03e-0712
sensory system2.03e-0712
entire sense organ system2.03e-0712
regional part of spinal cord2.12e-075
gray matter of spinal cord2.12e-075
central nervous system3.06e-0773
subdivision of head5.10e-0711
nervous system8.25e-0775
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