FFCP PHASE1:Mm9::chr4:76096788..76096815,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:76096788..76096815,+
|short_description=p@chr4:76096788..76096815,+
|description=CAGE_peak_at_chr4:76096788..76096815,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:76096788..76096815,+ | |||
|description=CAGE_peak_at_chr4:76096788..76096815,+ | |||
|id=chr4:76096788..76096815,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.15e-10!23;CL:0000337!1.15e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-08,23;CL:0000337,1.85e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.97e-17!71;UBERON:0003075!4.97e-17!71;UBERON:0007284!4.97e-17!71;UBERON:0003056!1.27e-14!49;UBERON:0000033!1.04e-13!63;UBERON:0001049!7.87e-13!52;UBERON:0005068!7.87e-13!52;UBERON:0006241!7.87e-13!52;UBERON:0007135!7.87e-13!52;UBERON:0004121!2.39e-11!102;UBERON:0000924!2.39e-11!102;UBERON:0006601!2.39e-11!102;UBERON:0002020!3.62e-11!34;UBERON:0001017!2.06e-10!73;UBERON:0005743!2.06e-10!73;UBERON:0000073!6.30e-10!75;UBERON:0001016!6.30e-10!75;UBERON:0002616!7.66e-10!49;UBERON:0000955!7.79e-10!50;UBERON:0006238!7.79e-10!50;UBERON:0003080!8.89e-10!40;UBERON:0002780!1.63e-09!39;UBERON:0001890!1.63e-09!39;UBERON:0006240!1.63e-09!39;UBERON:0002791!7.54e-08!29;UBERON:0003528!7.54e-08!29;UBERON:0001893!7.54e-08!29;UBERON:0000153!7.09e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.09e-13,64;UBERON:0003075,1.09e-13,64;UBERON:0007284,1.09e-13,64;UBERON:0003056,1.08e-11,49;UBERON:0010371,2.80e-11,73;UBERON:0010314,5.49e-10,92;UBERON:0000970,4.03e-09,9;UBERON:0000019,4.03e-09,9;UBERON:0000047,4.03e-09,9;UBERON:0010312,4.03e-09,9;UBERON:0004088,4.03e-09,9;UBERON:0002104,4.03e-09,9;UBERON:0001456,4.03e-09,9;UBERON:0003072,4.03e-09,9;UBERON:0004128,4.03e-09,9;UBERON:0003071,4.03e-09,9;UBERON:0001049,6.13e-09,52;UBERON:0005068,6.13e-09,52;UBERON:0006241,6.13e-09,52;UBERON:0007135,6.13e-09,52;UBERON:0004121,6.29e-09,95;UBERON:0000924,6.29e-09,95;UBERON:0006601,6.29e-09,95;UBERON:0000073,3.29e-08,54;UBERON:0002240,7.23e-08,6;UBERON:0005174,7.23e-08,6;UBERON:0001137,7.23e-08,6;UBERON:0002020,1.80e-07,34;UBERON:0000020,2.03e-07,12;UBERON:0001032,2.03e-07,12;UBERON:0004456,2.03e-07,12;UBERON:0001948,2.12e-07,5;UBERON:0002315,2.12e-07,5;UBERON:0001017,3.06e-07,73;UBERON:0001444,5.10e-07,11;UBERON:0001016,8.25e-07,75 | |||
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| ||
|short_description=p@chr4:76096788..76096815,+ | |||
}} | }} |
Latest revision as of 17:39, 5 August 2015
Short description: | p@chr4:76096788..76096815, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:76096788..76096815, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.85e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.09e-13 | 64 |
neural plate | 1.09e-13 | 64 |
presumptive neural plate | 1.09e-13 | 64 |
pre-chordal neural plate | 1.08e-11 | 49 |
ecto-epithelium | 2.80e-11 | 73 |
structure with developmental contribution from neural crest | 5.49e-10 | 92 |
eye | 4.03e-09 | 9 |
camera-type eye | 4.03e-09 | 9 |
simple eye | 4.03e-09 | 9 |
immature eye | 4.03e-09 | 9 |
ocular region | 4.03e-09 | 9 |
visual system | 4.03e-09 | 9 |
face | 4.03e-09 | 9 |
optic cup | 4.03e-09 | 9 |
optic vesicle | 4.03e-09 | 9 |
eye primordium | 4.03e-09 | 9 |
neural tube | 6.13e-09 | 52 |
neural rod | 6.13e-09 | 52 |
future spinal cord | 6.13e-09 | 52 |
neural keel | 6.13e-09 | 52 |
ectoderm-derived structure | 6.29e-09 | 95 |
ectoderm | 6.29e-09 | 95 |
presumptive ectoderm | 6.29e-09 | 95 |
regional part of nervous system | 3.29e-08 | 54 |
spinal cord | 7.23e-08 | 6 |
dorsal region element | 7.23e-08 | 6 |
dorsum | 7.23e-08 | 6 |
gray matter | 1.80e-07 | 34 |
sense organ | 2.03e-07 | 12 |
sensory system | 2.03e-07 | 12 |
entire sense organ system | 2.03e-07 | 12 |
regional part of spinal cord | 2.12e-07 | 5 |
gray matter of spinal cord | 2.12e-07 | 5 |
central nervous system | 3.06e-07 | 73 |
subdivision of head | 5.10e-07 | 11 |
nervous system | 8.25e-07 | 75 |